Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 RNU1-124P-201ENST00000363861 145 ntBASIC1.61□□□□□ -2.15
TMEM259Q4ZIN3 RNU6-1126P-201ENST00000384002 107 ntBASIC1.61□□□□□ -2.15
TMEM259Q4ZIN3 SNORD28-201ENST00000384706 75 ntBASIC1.61□□□□□ -2.15
TMEM259Q4ZIN3 MIR3678-201ENST00000578455 94 ntBASIC1.61□□□□□ -2.15
TMEM259Q4ZIN3 SNORD113.1-201ENST00000363280 73 ntBASIC1.6□□□□□ -2.15
TMEM259Q4ZIN3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.6□□□□□ -2.15
TMEM259Q4ZIN3 RNU1-123P-201ENST00000458950 160 ntBASIC1.6□□□□□ -2.15
TMEM259Q4ZIN3 RNA5SP255-201ENST00000516370 107 ntBASIC1.6□□□□□ -2.15
TMEM259Q4ZIN3 AP1B1P2-201ENST00000416196 106 ntBASIC1.59□□□□□ -2.15
TMEM259Q4ZIN3 AC244098.3-201ENST00000424803 96 ntBASIC1.59□□□□□ -2.15
TMEM259Q4ZIN3 snoU13.31-201ENST00000607291 104 ntBASIC1.59□□□□□ -2.15
TMEM259Q4ZIN3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
TMEM259Q4ZIN3 RNU6-54P-201ENST00000365563 107 ntBASIC1.58□□□□□ -2.16
TMEM259Q4ZIN3 MIR618-201ENST00000385287 98 ntBASIC1.58□□□□□ -2.16
TMEM259Q4ZIN3 Y_RNA.443-201ENST00000384135 111 ntBASIC1.57□□□□□ -2.16
TMEM259Q4ZIN3 MIR617-201ENST00000385030 97 ntBASIC1.57□□□□□ -2.16
TMEM259Q4ZIN3 RNU6-274P-201ENST00000459566 107 ntBASIC1.57□□□□□ -2.16
TMEM259Q4ZIN3 RNU1-92P-201ENST00000517017 135 ntBASIC1.57□□□□□ -2.16
TMEM259Q4ZIN3 SNORD53B-201ENST00000577887 78 ntBASIC1.57□□□□□ -2.16
TMEM259Q4ZIN3 AC011195.1-201ENST00000578177 177 ntBASIC1.57□□□□□ -2.16
TMEM259Q4ZIN3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
TMEM259Q4ZIN3 SNORD18A-201ENST00000363753 72 ntBASIC1.56□□□□□ -2.16
TMEM259Q4ZIN3 SNORD99-201ENST00000408612 74 ntBASIC1.56□□□□□ -2.16
TMEM259Q4ZIN3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.56□□□□□ -2.16
TMEM259Q4ZIN3 AL691482.2-201ENST00000457453 84 ntBASIC1.56□□□□□ -2.16
TMEM259Q4ZIN3 BX248123.2-201ENST00000606318 124 ntBASIC1.56□□□□□ -2.16
TMEM259Q4ZIN3 MIR216B-201ENST00000390186 82 ntBASIC1.55□□□□□ -2.16
TMEM259Q4ZIN3 RNU7-95P-201ENST00000459222 64 ntBASIC1.55□□□□□ -2.16
TMEM259Q4ZIN3 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
TMEM259Q4ZIN3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TMEM259Q4ZIN3 RNU6-471P-201ENST00000383944 106 ntBASIC1.54□□□□□ -2.16
TMEM259Q4ZIN3 MIR519E-201ENST00000385075 84 ntBASIC1.54□□□□□ -2.16
TMEM259Q4ZIN3 MIR517C-201ENST00000385103 95 ntBASIC1.54□□□□□ -2.16
TMEM259Q4ZIN3 MIR1323-201ENST00000408090 73 ntBASIC1.54□□□□□ -2.16
TMEM259Q4ZIN3 RNU6-955P-201ENST00000410497 104 ntBASIC1.54□□□□□ -2.16
TMEM259Q4ZIN3 RNU7-74P-201ENST00000459104 62 ntBASIC1.54□□□□□ -2.16
TMEM259Q4ZIN3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.54□□□□□ -2.16
TMEM259Q4ZIN3 RNU6-1216P-201ENST00000362590 107 ntBASIC1.53□□□□□ -2.16
TMEM259Q4ZIN3 RNU6-716P-201ENST00000365621 103 ntBASIC1.53□□□□□ -2.16
TMEM259Q4ZIN3 SNORA67.6-201ENST00000391093 99 ntBASIC1.53□□□□□ -2.16
TMEM259Q4ZIN3 SNORD42B-201ENST00000458893 67 ntBASIC1.53□□□□□ -2.16
TMEM259Q4ZIN3 MIR7974-201ENST00000615835 79 ntBASIC1.53□□□□□ -2.16
TMEM259Q4ZIN3 MIR7-2-201ENST00000384970 110 ntBASIC1.52□□□□□ -2.17
TMEM259Q4ZIN3 RNA5SP47-201ENST00000517230 109 ntBASIC1.52□□□□□ -2.17
TMEM259Q4ZIN3 RNU6V-201ENST00000384105 107 ntBASIC1.51□□□□□ -2.17
TMEM259Q4ZIN3 MIR8053-201ENST00000613344 75 ntBASIC1.51□□□□□ -2.17
TMEM259Q4ZIN3 MIR6509-201ENST00000614603 85 ntBASIC1.51□□□□□ -2.17
TMEM259Q4ZIN3 RNU6-495P-201ENST00000362995 107 ntBASIC1.5□□□□□ -2.17
TMEM259Q4ZIN3 SNORA25.4-201ENST00000363666 124 ntBASIC1.5□□□□□ -2.17
TMEM259Q4ZIN3 RNU6-1039P-201ENST00000383931 107 ntBASIC1.5□□□□□ -2.17
TMEM259Q4ZIN3 MIR320A-201ENST00000385302 82 ntBASIC1.5□□□□□ -2.17
TMEM259Q4ZIN3 SNORD75.2-201ENST00000408784 58 ntBASIC1.5□□□□□ -2.17
TMEM259Q4ZIN3 RNA5SP147-201ENST00000516493 109 ntBASIC1.5□□□□□ -2.17
TMEM259Q4ZIN3 SNORA31.24-201ENST00000517232 57 ntBASIC1.5□□□□□ -2.17
TMEM259Q4ZIN3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
TMEM259Q4ZIN3 RNU6-939P-201ENST00000384634 107 ntBASIC1.49□□□□□ -2.17
TMEM259Q4ZIN3 SNORD41.1-201ENST00000391000 69 ntBASIC1.49□□□□□ -2.17
TMEM259Q4ZIN3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.49□□□□□ -2.17
TMEM259Q4ZIN3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.49□□□□□ -2.17
TMEM259Q4ZIN3 MIR18A-201ENST00000362310 71 ntBASIC1.48□□□□□ -2.17
TMEM259Q4ZIN3 RNU6-990P-201ENST00000364385 104 ntBASIC1.48□□□□□ -2.17
TMEM259Q4ZIN3 RNU6-726P-201ENST00000364680 107 ntBASIC1.48□□□□□ -2.17
TMEM259Q4ZIN3 MIR489-201ENST00000384923 84 ntBASIC1.48□□□□□ -2.17
TMEM259Q4ZIN3 RNU6-321P-201ENST00000410912 106 ntBASIC1.48□□□□□ -2.17
TMEM259Q4ZIN3 AC093423.1-201ENST00000440817 142 ntBASIC1.48□□□□□ -2.17
TMEM259Q4ZIN3 SCARNA16.5-201ENST00000517114 183 ntBASIC1.48□□□□□ -2.17
TMEM259Q4ZIN3 MIR548O2-201ENST00000616090 70 ntBASIC1.48□□□□□ -2.17
TMEM259Q4ZIN3 MIR8070-201ENST00000616510 88 ntBASIC1.48□□□□□ -2.17
TMEM259Q4ZIN3 RNU6-1187P-201ENST00000364771 110 ntBASIC1.47□□□□□ -2.17
TMEM259Q4ZIN3 RNA5SP222-201ENST00000411039 105 ntBASIC1.46□□□□□ -2.18
TMEM259Q4ZIN3 AL354695.1-201ENST00000427935 228 ntBASIC1.46□□□□□ -2.18
TMEM259Q4ZIN3 TRMT112P2-201ENST00000512910 132 ntBASIC1.46□□□□□ -2.18
TMEM259Q4ZIN3 SNORA40.17-201ENST00000517256 115 ntBASIC1.46□□□□□ -2.18
TMEM259Q4ZIN3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.46□□□□□ -2.18
TMEM259Q4ZIN3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
TMEM259Q4ZIN3 SNORA40.6-201ENST00000391153 128 ntBASIC1.45□□□□□ -2.18
TMEM259Q4ZIN3 MIR1304-201ENST00000408243 91 ntBASIC1.45□□□□□ -2.18
TMEM259Q4ZIN3 MIR4421-201ENST00000578133 69 ntBASIC1.45□□□□□ -2.18
TMEM259Q4ZIN3 RNU4-45P-201ENST00000365469 141 ntBASIC1.44□□□□□ -2.18
TMEM259Q4ZIN3 MTND4LP19-201ENST00000403051 166 ntBASIC1.44□□□□□ -2.18
TMEM259Q4ZIN3 MIR3657-201ENST00000584818 117 ntBASIC1.44□□□□□ -2.18
TMEM259Q4ZIN3 MIR633-201ENST00000384821 98 ntBASIC1.43□□□□□ -2.18
TMEM259Q4ZIN3 RNA5SP227-201ENST00000516184 113 ntBASIC1.43□□□□□ -2.18
TMEM259Q4ZIN3 RNU6-752P-201ENST00000516376 102 ntBASIC1.43□□□□□ -2.18
TMEM259Q4ZIN3 RNU5B-6P-201ENST00000516765 68 ntBASIC1.43□□□□□ -2.18
TMEM259Q4ZIN3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.42□□□□□ -2.18
TMEM259Q4ZIN3 snoU13.13-201ENST00000458842 104 ntBASIC1.42□□□□□ -2.18
TMEM259Q4ZIN3 MIR4460-201ENST00000577862 86 ntBASIC1.42□□□□□ -2.18
TMEM259Q4ZIN3 RNU6-42P-201ENST00000384165 107 ntBASIC1.41□□□□□ -2.18
TMEM259Q4ZIN3 RNU7-24P-201ENST00000458867 62 ntBASIC1.41□□□□□ -2.18
TMEM259Q4ZIN3 MIR4661-201ENST00000582720 75 ntBASIC1.41□□□□□ -2.18
TMEM259Q4ZIN3 MIR4511-201ENST00000582784 87 ntBASIC1.41□□□□□ -2.18
TMEM259Q4ZIN3 AL353765.1-201ENST00000605514 183 ntBASIC1.41□□□□□ -2.18
TMEM259Q4ZIN3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.41□□□□□ -2.18
TMEM259Q4ZIN3 RNU6-645P-201ENST00000364649 106 ntBASIC1.4□□□□□ -2.19
TMEM259Q4ZIN3 MIR150-201ENST00000385048 84 ntBASIC1.4□□□□□ -2.19
TMEM259Q4ZIN3 RNU6-269P-201ENST00000391077 97 ntBASIC1.4□□□□□ -2.19
TMEM259Q4ZIN3 AC018659.1-201ENST00000551083 169 ntBASIC1.4□□□□□ -2.19
TMEM259Q4ZIN3 RNU6-392P-201ENST00000364926 101 ntBASIC1.39□□□□□ -2.19
TMEM259Q4ZIN3 RNU6-260P-201ENST00000384092 107 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 284.7 ms