Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.44□□□□□ -2.34
KHDC1Q4VXA5 RNU4-32P-201ENST00000363404 141 ntBASIC0.43□□□□□ -2.34
KHDC1Q4VXA5 RNU6-1131P-201ENST00000364955 107 ntBASIC0.43□□□□□ -2.34
KHDC1Q4VXA5 MIR193B-201ENST00000384907 83 ntBASIC0.43□□□□□ -2.34
KHDC1Q4VXA5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
KHDC1Q4VXA5 MIR1236-201ENST00000408340 102 ntBASIC0.43□□□□□ -2.34
KHDC1Q4VXA5 RNU6-844P-201ENST00000517175 102 ntBASIC0.43□□□□□ -2.34
KHDC1Q4VXA5 MIR4668-201ENST00000582284 70 ntBASIC0.43□□□□□ -2.34
KHDC1Q4VXA5 SNORA70.25-201ENST00000612741 95 ntBASIC0.43□□□□□ -2.34
KHDC1Q4VXA5 NAMPTP3-201ENST00000569273 224 ntBASIC0.42□□□□□ -2.34
KHDC1Q4VXA5 Y_RNA.205-201ENST00000364128 113 ntBASIC0.41□□□□□ -2.34
KHDC1Q4VXA5 RNU6-49P-201ENST00000384256 107 ntBASIC0.41□□□□□ -2.34
KHDC1Q4VXA5 MIR451A-201ENST00000385059 72 ntBASIC0.41□□□□□ -2.34
KHDC1Q4VXA5 RNA5SP292-201ENST00000390974 118 ntBASIC0.41□□□□□ -2.34
KHDC1Q4VXA5 SNORD110-201ENST00000408189 75 ntBASIC0.41□□□□□ -2.34
KHDC1Q4VXA5 SNORA18.5-201ENST00000516616 101 ntBASIC0.41□□□□□ -2.34
KHDC1Q4VXA5 U7.6-201ENST00000610841 64 ntBASIC0.41□□□□□ -2.34
KHDC1Q4VXA5 AC010487.4-201ENST00000637027 61 ntBASIC0.41□□□□□ -2.34
KHDC1Q4VXA5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.4□□□□□ -2.35
KHDC1Q4VXA5 Y_RNA.620-201ENST00000411009 88 ntBASIC0.4□□□□□ -2.35
KHDC1Q4VXA5 AC006210.1-201ENST00000424882 111 ntBASIC0.4□□□□□ -2.35
KHDC1Q4VXA5 MIR4460-201ENST00000577862 86 ntBASIC0.4□□□□□ -2.35
KHDC1Q4VXA5 AC069503.3-201ENST00000618674 145 ntBASIC0.4□□□□□ -2.35
KHDC1Q4VXA5 RNU6-633P-201ENST00000362612 103 ntBASIC0.39□□□□□ -2.35
KHDC1Q4VXA5 MT-TY-201ENST00000387409 66 ntBASIC0.39□□□□□ -2.35
KHDC1Q4VXA5 MIR1273G-201ENST00000577677 100 ntBASIC0.39□□□□□ -2.35
KHDC1Q4VXA5 MIR519C-201ENST00000385053 87 ntBASIC0.38□□□□□ -2.35
KHDC1Q4VXA5 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
KHDC1Q4VXA5 RNA5SP62-201ENST00000363457 110 ntBASIC0.37□□□□□ -2.35
KHDC1Q4VXA5 RNY4P3-201ENST00000365254 95 ntBASIC0.37□□□□□ -2.35
KHDC1Q4VXA5 RNA5SP128-201ENST00000365305 116 ntBASIC0.37□□□□□ -2.35
KHDC1Q4VXA5 Y_RNA.369-201ENST00000365568 117 ntBASIC0.37□□□□□ -2.35
KHDC1Q4VXA5 MIR760-201ENST00000390220 80 ntBASIC0.37□□□□□ -2.35
KHDC1Q4VXA5 SNORA9.1-201ENST00000362412 131 ntBASIC0.36□□□□□ -2.35
KHDC1Q4VXA5 RNU6-1298P-201ENST00000362456 101 ntBASIC0.36□□□□□ -2.35
KHDC1Q4VXA5 SNORA63.2-201ENST00000362603 126 ntBASIC0.36□□□□□ -2.35
KHDC1Q4VXA5 RNU6-219P-201ENST00000364728 107 ntBASIC0.36□□□□□ -2.35
KHDC1Q4VXA5 RNU6-1051P-201ENST00000365471 102 ntBASIC0.36□□□□□ -2.35
KHDC1Q4VXA5 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
KHDC1Q4VXA5 RNU6-402P-201ENST00000410678 103 ntBASIC0.36□□□□□ -2.35
KHDC1Q4VXA5 AC108740.1-201ENST00000498629 225 ntBASIC0.36□□□□□ -2.35
KHDC1Q4VXA5 MIR5582-201ENST00000579697 68 ntBASIC0.36□□□□□ -2.35
KHDC1Q4VXA5 MIR548O2-201ENST00000616090 70 ntBASIC0.36□□□□□ -2.35
KHDC1Q4VXA5 SNORD115-27-201ENST00000364430 82 ntBASIC0.35□□□□□ -2.35
KHDC1Q4VXA5 RNU6-1134P-201ENST00000365156 101 ntBASIC0.35□□□□□ -2.35
KHDC1Q4VXA5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
KHDC1Q4VXA5 AC073261.1-201ENST00000429409 121 ntBASIC0.35□□□□□ -2.35
KHDC1Q4VXA5 FGF7P7-201ENST00000514120 227 ntBASIC0.35□□□□□ -2.35
KHDC1Q4VXA5 RNU6-1232P-201ENST00000516299 86 ntBASIC0.35□□□□□ -2.35
KHDC1Q4VXA5 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.35□□□□□ -2.35
KHDC1Q4VXA5 RNA5SP170-201ENST00000517150 101 ntBASIC0.35□□□□□ -2.35
KHDC1Q4VXA5 AC069113.3-201ENST00000521019 150 ntBASIC0.35□□□□□ -2.35
KHDC1Q4VXA5 MIR4796-201ENST00000580742 81 ntBASIC0.35□□□□□ -2.35
KHDC1Q4VXA5 RNA5SP325-201ENST00000363756 130 ntBASIC0.34□□□□□ -2.36
KHDC1Q4VXA5 RNU6-815P-201ENST00000384080 113 ntBASIC0.34□□□□□ -2.36
KHDC1Q4VXA5 RNU6-1052P-201ENST00000411398 104 ntBASIC0.34□□□□□ -2.36
KHDC1Q4VXA5 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
KHDC1Q4VXA5 RNU6-719P-201ENST00000516671 104 ntBASIC0.34□□□□□ -2.36
KHDC1Q4VXA5 YWHAEP2-201ENST00000580066 112 ntBASIC0.34□□□□□ -2.36
KHDC1Q4VXA5 Y_RNA.17-201ENST00000362433 111 ntBASIC0.33□□□□□ -2.36
KHDC1Q4VXA5 Y_RNA.125-201ENST00000363371 111 ntBASIC0.33□□□□□ -2.36
KHDC1Q4VXA5 RNU6-675P-201ENST00000384236 104 ntBASIC0.33□□□□□ -2.36
KHDC1Q4VXA5 Y_RNA.558-201ENST00000384685 113 ntBASIC0.33□□□□□ -2.36
KHDC1Q4VXA5 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
KHDC1Q4VXA5 HMGN2P22-201ENST00000427588 175 ntBASIC0.33□□□□□ -2.36
KHDC1Q4VXA5 RNU6-497P-201ENST00000365316 104 ntBASIC0.32□□□□□ -2.36
KHDC1Q4VXA5 RNU7-153P-201ENST00000516455 62 ntBASIC0.32□□□□□ -2.36
KHDC1Q4VXA5 RNU6-267P-201ENST00000516714 103 ntBASIC0.32□□□□□ -2.36
KHDC1Q4VXA5 MIR3140-201ENST00000583685 90 ntBASIC0.32□□□□□ -2.36
KHDC1Q4VXA5 MIR924-201ENST00000638017 53 ntBASIC0.32□□□□□ -2.36
KHDC1Q4VXA5 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.31□□□□□ -2.36
KHDC1Q4VXA5 SNORD115-37-201ENST00000363768 82 ntBASIC0.31□□□□□ -2.36
KHDC1Q4VXA5 RNU6-294P-201ENST00000364999 102 ntBASIC0.31□□□□□ -2.36
KHDC1Q4VXA5 MIR501-201ENST00000390204 84 ntBASIC0.31□□□□□ -2.36
KHDC1Q4VXA5 MIR548AD-201ENST00000584780 82 ntBASIC0.31□□□□□ -2.36
KHDC1Q4VXA5 RNU6V-201ENST00000384105 107 ntBASIC0.3□□□□□ -2.36
KHDC1Q4VXA5 SNORA25.13-201ENST00000516395 103 ntBASIC0.3□□□□□ -2.36
KHDC1Q4VXA5 RNU5B-6P-201ENST00000516765 68 ntBASIC0.3□□□□□ -2.36
KHDC1Q4VXA5 MIR499B-201ENST00000636498 73 ntBASIC0.3□□□□□ -2.36
KHDC1Q4VXA5 MIR4315-1-201ENST00000636800 73 ntBASIC0.3□□□□□ -2.36
KHDC1Q4VXA5 MIR4315-2-201ENST00000640925 73 ntBASIC0.3□□□□□ -2.36
KHDC1Q4VXA5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
KHDC1Q4VXA5 MIR330-201ENST00000362196 94 ntBASIC0.29□□□□□ -2.36
KHDC1Q4VXA5 SNORA24B-201ENST00000384176 131 ntBASIC0.29□□□□□ -2.36
KHDC1Q4VXA5 SNORD90-201ENST00000391145 111 ntBASIC0.29□□□□□ -2.36
KHDC1Q4VXA5 Y_RNA.593-201ENST00000410292 98 ntBASIC0.29□□□□□ -2.36
KHDC1Q4VXA5 AC093729.1-201ENST00000513074 128 ntBASIC0.29□□□□□ -2.36
KHDC1Q4VXA5 RNU7-129P-201ENST00000516128 62 ntBASIC0.29□□□□□ -2.36
KHDC1Q4VXA5 MIR8087-201ENST00000612745 78 ntBASIC0.29□□□□□ -2.36
KHDC1Q4VXA5 uc_338.10-201ENST00000621872 182 ntBASIC0.29□□□□□ -2.36
KHDC1Q4VXA5 MIR4677-201ENST00000584153 80 ntBASIC0.28□□□□□ -2.36
KHDC1Q4VXA5 IGLL4P-201ENST00000614590 133 ntBASIC0.28□□□□□ -2.36
KHDC1Q4VXA5 MIR548BB-201ENST00000626714 66 ntBASIC0.28□□□□□ -2.36
KHDC1Q4VXA5 RNU5F-1-201ENST00000362507 117 ntBASIC0.27□□□□□ -2.37
KHDC1Q4VXA5 RNU6-652P-201ENST00000365488 107 ntBASIC0.27□□□□□ -2.37
KHDC1Q4VXA5 RNA5SP330-201ENST00000517096 96 ntBASIC0.27□□□□□ -2.37
KHDC1Q4VXA5 MIR4473-201ENST00000583731 91 ntBASIC0.27□□□□□ -2.37
KHDC1Q4VXA5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.26□□□□□ -2.37
KHDC1Q4VXA5 RNY1P1-201ENST00000364372 112 ntBASIC0.26□□□□□ -2.37
KHDC1Q4VXA5 Y_RNA.407-201ENST00000383986 113 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms