Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 Y_RNA.355-201ENST00000365462 98 ntBASIC1.39□□□□□ -2.19
SOX4Q06945 SNORD75.2-201ENST00000408784 58 ntBASIC1.39□□□□□ -2.19
SOX4Q06945 FABP5P4-201ENST00000437203 171 ntBASIC1.39□□□□□ -2.19
SOX4Q06945 AL691482.2-201ENST00000457453 84 ntBASIC1.39□□□□□ -2.19
SOX4Q06945 U7.7-201ENST00000459276 60 ntBASIC1.39□□□□□ -2.19
SOX4Q06945 RNU6-881P-201ENST00000516813 102 ntBASIC1.39□□□□□ -2.19
SOX4Q06945 MIR4639-201ENST00000584938 69 ntBASIC1.39□□□□□ -2.19
SOX4Q06945 AC244669.1-204ENST00000621564 178 ntBASIC1.39□□□□□ -2.19
SOX4Q06945 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
SOX4Q06945 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SOX4Q06945 RNU6-495P-201ENST00000362995 107 ntBASIC1.38□□□□□ -2.19
SOX4Q06945 SNORD28-201ENST00000384706 75 ntBASIC1.38□□□□□ -2.19
SOX4Q06945 RNU6-604P-201ENST00000390917 100 ntBASIC1.38□□□□□ -2.19
SOX4Q06945 RNU7-24P-201ENST00000458867 62 ntBASIC1.38□□□□□ -2.19
SOX4Q06945 RNU6-469P-201ENST00000516253 101 ntBASIC1.38□□□□□ -2.19
SOX4Q06945 MIR548O2-201ENST00000616090 70 ntBASIC1.38□□□□□ -2.19
SOX4Q06945 SNORD113.1-201ENST00000363280 73 ntBASIC1.36□□□□□ -2.19
SOX4Q06945 MIR19B1-201ENST00000384829 87 ntBASIC1.36□□□□□ -2.19
SOX4Q06945 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
SOX4Q06945 RNU6-630P-201ENST00000391258 106 ntBASIC1.36□□□□□ -2.19
SOX4Q06945 NAMPTP3-201ENST00000569273 224 ntBASIC1.36□□□□□ -2.19
SOX4Q06945 AC005520.4-201ENST00000604337 90 ntBASIC1.36□□□□□ -2.19
SOX4Q06945 MIR26B-201ENST00000362251 77 ntBASIC1.35□□□□□ -2.19
SOX4Q06945 Y_RNA.205-201ENST00000364128 113 ntBASIC1.35□□□□□ -2.19
SOX4Q06945 SNORD41.1-201ENST00000391000 69 ntBASIC1.35□□□□□ -2.19
SOX4Q06945 RNU7-74P-201ENST00000459104 62 ntBASIC1.35□□□□□ -2.19
SOX4Q06945 snoU13.18-201ENST00000459483 104 ntBASIC1.35□□□□□ -2.19
SOX4Q06945 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.35□□□□□ -2.19
SOX4Q06945 RNU6-1216P-201ENST00000362590 107 ntBASIC1.34□□□□□ -2.19
SOX4Q06945 RNU6-54P-201ENST00000365563 107 ntBASIC1.34□□□□□ -2.19
SOX4Q06945 RNU6-1039P-201ENST00000383931 107 ntBASIC1.34□□□□□ -2.19
SOX4Q06945 MIR548L-201ENST00000408303 86 ntBASIC1.34□□□□□ -2.19
SOX4Q06945 SNORD124-201ENST00000459577 104 ntBASIC1.34□□□□□ -2.19
SOX4Q06945 SNORD18A-201ENST00000363753 72 ntBASIC1.33□□□□□ -2.2
SOX4Q06945 RNU6-471P-201ENST00000383944 106 ntBASIC1.33□□□□□ -2.2
SOX4Q06945 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
SOX4Q06945 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
SOX4Q06945 MIR6509-201ENST00000614603 85 ntBASIC1.33□□□□□ -2.2
SOX4Q06945 RNU6V-201ENST00000384105 107 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 Y_RNA.443-201ENST00000384135 111 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 SNORD116-24-201ENST00000384549 92 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 MIR200A-201ENST00000384875 90 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 MIR489-201ENST00000384923 84 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 RNA5SP47-201ENST00000517230 109 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 MIR3678-201ENST00000578455 94 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 MIR6078-201ENST00000611069 100 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 MIR7974-201ENST00000615835 79 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 RNU6-726P-201ENST00000364680 107 ntBASIC1.31□□□□□ -2.2
SOX4Q06945 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
SOX4Q06945 MIR573-201ENST00000384964 99 ntBASIC1.31□□□□□ -2.2
SOX4Q06945 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
SOX4Q06945 MIR3612-201ENST00000579753 87 ntBASIC1.31□□□□□ -2.2
SOX4Q06945 SNORA25.4-201ENST00000363666 124 ntBASIC1.3□□□□□ -2.2
SOX4Q06945 RNU6-1335P-201ENST00000365426 107 ntBASIC1.3□□□□□ -2.2
SOX4Q06945 MIR203A-201ENST00000384836 110 ntBASIC1.3□□□□□ -2.2
SOX4Q06945 MIR499A-201ENST00000384903 122 ntBASIC1.3□□□□□ -2.2
SOX4Q06945 MIR1276-201ENST00000408707 83 ntBASIC1.3□□□□□ -2.2
SOX4Q06945 AC093423.1-201ENST00000440817 142 ntBASIC1.3□□□□□ -2.2
SOX4Q06945 RNU6-716P-201ENST00000365621 103 ntBASIC1.29□□□□□ -2.2
SOX4Q06945 SNORD42B-201ENST00000458893 67 ntBASIC1.29□□□□□ -2.2
SOX4Q06945 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.29□□□□□ -2.2
SOX4Q06945 AC025627.3-201ENST00000582078 182 ntBASIC1.29□□□□□ -2.2
SOX4Q06945 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
SOX4Q06945 MT-TY-201ENST00000387409 66 ntBASIC1.28□□□□□ -2.2
SOX4Q06945 RNU6-982P-201ENST00000516216 102 ntBASIC1.28□□□□□ -2.2
SOX4Q06945 RNA5SP102-201ENST00000516865 106 ntBASIC1.28□□□□□ -2.2
SOX4Q06945 MIR4460-201ENST00000577862 86 ntBASIC1.28□□□□□ -2.2
SOX4Q06945 MIR96-201ENST00000362288 78 ntBASIC1.27□□□□□ -2.21
SOX4Q06945 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
SOX4Q06945 RNU1-141P-201ENST00000364623 158 ntBASIC1.26□□□□□ -2.21
SOX4Q06945 RNU6-260P-201ENST00000384092 107 ntBASIC1.26□□□□□ -2.21
SOX4Q06945 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
SOX4Q06945 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SOX4Q06945 SNORD114-24-201ENST00000365029 72 ntBASIC1.25□□□□□ -2.21
SOX4Q06945 RNU6-269P-201ENST00000391077 97 ntBASIC1.25□□□□□ -2.21
SOX4Q06945 SCARNA16.5-201ENST00000517114 183 ntBASIC1.25□□□□□ -2.21
SOX4Q06945 RNA5SP404-201ENST00000517118 132 ntBASIC1.25□□□□□ -2.21
SOX4Q06945 MIR3657-201ENST00000584818 117 ntBASIC1.25□□□□□ -2.21
SOX4Q06945 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.24□□□□□ -2.21
SOX4Q06945 AC073869.9-201ENST00000641610 120 ntBASIC1.24□□□□□ -2.21
SOX4Q06945 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
SOX4Q06945 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
SOX4Q06945 SNORD114-27-201ENST00000363766 70 ntBASIC1.23□□□□□ -2.21
SOX4Q06945 RNU1-124P-201ENST00000363861 145 ntBASIC1.23□□□□□ -2.21
SOX4Q06945 SNORA8.2-201ENST00000384372 139 ntBASIC1.23□□□□□ -2.21
SOX4Q06945 RNA5SP255-201ENST00000516370 107 ntBASIC1.23□□□□□ -2.21
SOX4Q06945 RNA5SP480-201ENST00000516840 109 ntBASIC1.23□□□□□ -2.21
SOX4Q06945 MTND4LP1-201ENST00000446263 157 ntBASIC1.22□□□□□ -2.21
SOX4Q06945 AC011195.1-201ENST00000578177 177 ntBASIC1.22□□□□□ -2.21
SOX4Q06945 RNU6-668P-201ENST00000364180 107 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SOX4Q06945 MIR618-201ENST00000385287 98 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 SNORD99-201ENST00000408612 74 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 RNU5B-6P-201ENST00000516765 68 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 MIR4511-201ENST00000582784 87 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 MIR6504-201ENST00000613520 61 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 AL109933.3-201ENST00000619095 188 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 MIR6828-201ENST00000636181 60 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 MIR6767-201ENST00000637302 66 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 MIR18A-201ENST00000362310 71 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms