Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RNA5SP47-201ENST00000517230 109 ntBASIC0.57□□□□□ -2.32
LMO4P61968 MIR4712-201ENST00000583750 82 ntBASIC0.57□□□□□ -2.32
LMO4P61968 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.57□□□□□ -2.32
LMO4P61968 RNU6-1051P-201ENST00000365471 102 ntBASIC0.56□□□□□ -2.32
LMO4P61968 FGF7P7-201ENST00000514120 227 ntBASIC0.56□□□□□ -2.32
LMO4P61968 MIR3140-201ENST00000583685 90 ntBASIC0.56□□□□□ -2.32
LMO4P61968 MIR6513-201ENST00000621188 64 ntBASIC0.56□□□□□ -2.32
LMO4P61968 AC067863.3-201ENST00000624172 122 ntBASIC0.56□□□□□ -2.32
LMO4P61968 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.56□□□□□ -2.32
LMO4P61968 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
LMO4P61968 RNU6-161P-201ENST00000363051 106 ntBASIC0.55□□□□□ -2.32
LMO4P61968 SNORA36.1-201ENST00000363424 132 ntBASIC0.55□□□□□ -2.32
LMO4P61968 SNORD41.1-201ENST00000391000 69 ntBASIC0.55□□□□□ -2.32
LMO4P61968 RNU6-279P-201ENST00000391297 101 ntBASIC0.55□□□□□ -2.32
LMO4P61968 RNA5SP222-201ENST00000411039 105 ntBASIC0.55□□□□□ -2.32
LMO4P61968 snoU13.17-201ENST00000458802 104 ntBASIC0.55□□□□□ -2.32
LMO4P61968 RNU6-857P-201ENST00000515893 110 ntBASIC0.55□□□□□ -2.32
LMO4P61968 RNA5SP480-201ENST00000516840 109 ntBASIC0.55□□□□□ -2.32
LMO4P61968 RNU6-557P-201ENST00000516842 110 ntBASIC0.55□□□□□ -2.32
LMO4P61968 SCARNA16.5-201ENST00000517114 183 ntBASIC0.55□□□□□ -2.32
LMO4P61968 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.55□□□□□ -2.32
LMO4P61968 RNU6-315P-201ENST00000362666 107 ntBASIC0.54□□□□□ -2.32
LMO4P61968 SNORD114-26-201ENST00000363543 72 ntBASIC0.54□□□□□ -2.32
LMO4P61968 RNU6-726P-201ENST00000364680 107 ntBASIC0.54□□□□□ -2.32
LMO4P61968 RNU6-716P-201ENST00000365621 103 ntBASIC0.54□□□□□ -2.32
LMO4P61968 SNORA24B-201ENST00000384176 131 ntBASIC0.54□□□□□ -2.32
LMO4P61968 MIR617-201ENST00000385030 97 ntBASIC0.54□□□□□ -2.32
LMO4P61968 MIR146A-201ENST00000385201 99 ntBASIC0.54□□□□□ -2.32
LMO4P61968 SNORD77.2-201ENST00000391045 68 ntBASIC0.54□□□□□ -2.32
LMO4P61968 RNU6-638P-201ENST00000516582 104 ntBASIC0.54□□□□□ -2.32
LMO4P61968 RNU6-1057P-201ENST00000517162 102 ntBASIC0.54□□□□□ -2.32
LMO4P61968 MIRLET7A1-201ENST00000362295 80 ntBASIC0.53□□□□□ -2.32
LMO4P61968 RNU6-208P-201ENST00000362431 107 ntBASIC0.53□□□□□ -2.32
LMO4P61968 RNU5F-1-201ENST00000362507 117 ntBASIC0.53□□□□□ -2.32
LMO4P61968 RNU4-45P-201ENST00000365469 141 ntBASIC0.53□□□□□ -2.32
LMO4P61968 MIR519E-201ENST00000385075 84 ntBASIC0.53□□□□□ -2.32
LMO4P61968 MIR548L-201ENST00000408303 86 ntBASIC0.53□□□□□ -2.32
LMO4P61968 RNU6-1052P-201ENST00000411398 104 ntBASIC0.53□□□□□ -2.32
LMO4P61968 RNU6-719P-201ENST00000516671 104 ntBASIC0.53□□□□□ -2.32
LMO4P61968 RNA5SP94-201ENST00000516917 108 ntBASIC0.53□□□□□ -2.32
LMO4P61968 MIR6828-201ENST00000636181 60 ntBASIC0.53□□□□□ -2.32
LMO4P61968 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
LMO4P61968 RNU6-686P-201ENST00000364839 107 ntBASIC0.52□□□□□ -2.33
LMO4P61968 MIR936-201ENST00000401264 98 ntBASIC0.52□□□□□ -2.33
LMO4P61968 Y_RNA.660-201ENST00000516002 120 ntBASIC0.52□□□□□ -2.33
LMO4P61968 RNY4P3-201ENST00000365254 95 ntBASIC0.51□□□□□ -2.33
LMO4P61968 SNORA36.2-201ENST00000384004 127 ntBASIC0.51□□□□□ -2.33
LMO4P61968 RNU6-24P-201ENST00000384440 107 ntBASIC0.51□□□□□ -2.33
LMO4P61968 Y_RNA.532-201ENST00000384590 113 ntBASIC0.51□□□□□ -2.33
LMO4P61968 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
LMO4P61968 RNA5SP227-201ENST00000516184 113 ntBASIC0.51□□□□□ -2.33
LMO4P61968 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.51□□□□□ -2.33
LMO4P61968 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.51□□□□□ -2.33
LMO4P61968 RNA5SP347-201ENST00000362445 119 ntBASIC0.5□□□□□ -2.33
LMO4P61968 Y_RNA.36-201ENST00000362602 112 ntBASIC0.5□□□□□ -2.33
LMO4P61968 Y_RNA.244-201ENST00000364484 109 ntBASIC0.5□□□□□ -2.33
LMO4P61968 Y_RNA.258-201ENST00000364613 105 ntBASIC0.5□□□□□ -2.33
LMO4P61968 Y_RNA.264-201ENST00000364665 102 ntBASIC0.5□□□□□ -2.33
LMO4P61968 MIR216A-201ENST00000385063 110 ntBASIC0.5□□□□□ -2.33
LMO4P61968 MIR140-201ENST00000385282 100 ntBASIC0.5□□□□□ -2.33
LMO4P61968 U3.27-201ENST00000391237 200 ntBASIC0.5□□□□□ -2.33
LMO4P61968 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.5□□□□□ -2.33
LMO4P61968 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.5□□□□□ -2.33
LMO4P61968 RNA5SP268-201ENST00000516828 124 ntBASIC0.5□□□□□ -2.33
LMO4P61968 RN7SL793P-201ENST00000583259 296 ntBASIC0.5□□□□□ -2.33
LMO4P61968 MIR7107-201ENST00000611489 80 ntBASIC0.5□□□□□ -2.33
LMO4P61968 AL162376.1-201ENST00000624117 175 ntBASIC0.5□□□□□ -2.33
LMO4P61968 Y_RNA.12-201ENST00000362393 112 ntBASIC0.49□□□□□ -2.33
LMO4P61968 RNU6-824P-201ENST00000363724 104 ntBASIC0.49□□□□□ -2.33
LMO4P61968 RNA5SP517-201ENST00000364724 117 ntBASIC0.49□□□□□ -2.33
LMO4P61968 MIR7-2-201ENST00000384970 110 ntBASIC0.49□□□□□ -2.33
LMO4P61968 RNU6-269P-201ENST00000391077 97 ntBASIC0.49□□□□□ -2.33
LMO4P61968 AC093423.1-201ENST00000440817 142 ntBASIC0.49□□□□□ -2.33
LMO4P61968 RNU7-74P-201ENST00000459104 62 ntBASIC0.49□□□□□ -2.33
LMO4P61968 RNA5SP121-201ENST00000516537 101 ntBASIC0.49□□□□□ -2.33
LMO4P61968 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
LMO4P61968 RNU6-1094P-201ENST00000362416 104 ntBASIC0.48□□□□□ -2.33
LMO4P61968 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
LMO4P61968 SNORA8.2-201ENST00000384372 139 ntBASIC0.48□□□□□ -2.33
LMO4P61968 RNU6-1177P-201ENST00000391058 104 ntBASIC0.48□□□□□ -2.33
LMO4P61968 RNA5SP193-201ENST00000410353 107 ntBASIC0.48□□□□□ -2.33
LMO4P61968 MIR4752-201ENST00000579672 72 ntBASIC0.48□□□□□ -2.33
LMO4P61968 U6.81-201ENST00000612550 106 ntBASIC0.48□□□□□ -2.33
LMO4P61968 MIR548O2-201ENST00000616090 70 ntBASIC0.48□□□□□ -2.33
LMO4P61968 Y_RNA.788-201ENST00000622394 112 ntBASIC0.48□□□□□ -2.33
LMO4P61968 RNU1-141P-201ENST00000364623 158 ntBASIC0.47□□□□□ -2.33
LMO4P61968 Y_RNA.371-201ENST00000365591 113 ntBASIC0.47□□□□□ -2.33
LMO4P61968 MIR216B-201ENST00000390186 82 ntBASIC0.47□□□□□ -2.33
LMO4P61968 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
LMO4P61968 SCARNA18B-201ENST00000458806 135 ntBASIC0.47□□□□□ -2.33
LMO4P61968 RNA5SP484-201ENST00000458857 111 ntBASIC0.47□□□□□ -2.33
LMO4P61968 AC097510.1-201ENST00000510945 133 ntBASIC0.47□□□□□ -2.33
LMO4P61968 MIR4711-201ENST00000578274 70 ntBASIC0.47□□□□□ -2.33
LMO4P61968 MIR4484-201ENST00000582855 83 ntBASIC0.47□□□□□ -2.33
LMO4P61968 SNORA25.18-201ENST00000607153 114 ntBASIC0.47□□□□□ -2.33
LMO4P61968 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
LMO4P61968 RNU6-340P-201ENST00000364005 107 ntBASIC0.46□□□□□ -2.34
LMO4P61968 RNU6-54P-201ENST00000365563 107 ntBASIC0.46□□□□□ -2.34
LMO4P61968 RNU6V-201ENST00000384105 107 ntBASIC0.46□□□□□ -2.34
LMO4P61968 RNU2-59P-201ENST00000410482 191 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms