Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU6-215P-201ENST00000365169 102 ntBASIC0.06□□□□□ -2.4
CDH11P55287 MIR643-201ENST00000385267 97 ntBASIC0.06□□□□□ -2.4
CDH11P55287 RNU6-972P-201ENST00000391208 107 ntBASIC0.06□□□□□ -2.4
CDH11P55287 RNU6-887P-201ENST00000410660 100 ntBASIC0.06□□□□□ -2.4
CDH11P55287 SNORA25.13-201ENST00000516395 103 ntBASIC0.06□□□□□ -2.4
CDH11P55287 MIR4536-1-201ENST00000583537 88 ntBASIC0.06□□□□□ -2.4
CDH11P55287 MIR4743-201ENST00000584576 69 ntBASIC0.06□□□□□ -2.4
CDH11P55287 RNU6-935P-201ENST00000410371 100 ntBASIC0.05□□□□□ -2.4
CDH11P55287 RNU6-652P-201ENST00000365488 107 ntBASIC0.04□□□□□ -2.4
CDH11P55287 RNU6-132P-201ENST00000383863 107 ntBASIC0.04□□□□□ -2.4
CDH11P55287 MIR876-201ENST00000401147 81 ntBASIC0.04□□□□□ -2.4
CDH11P55287 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.04□□□□□ -2.4
CDH11P55287 RNU6-65P-201ENST00000516332 98 ntBASIC0.04□□□□□ -2.4
CDH11P55287 MIR4460-201ENST00000577862 86 ntBASIC0.04□□□□□ -2.4
CDH11P55287 YWHAEP2-201ENST00000580066 112 ntBASIC0.04□□□□□ -2.4
CDH11P55287 MIRLET7F1-201ENST00000362202 87 ntBASIC0.03□□□□□ -2.4
CDH11P55287 Y_RNA.96-201ENST00000363092 109 ntBASIC0.03□□□□□ -2.4
CDH11P55287 Y_RNA.107-201ENST00000363190 121 ntBASIC0.03□□□□□ -2.4
CDH11P55287 Y_RNA.239-201ENST00000364444 113 ntBASIC0.03□□□□□ -2.4
CDH11P55287 SNORD20-201ENST00000384550 80 ntBASIC0.03□□□□□ -2.4
CDH11P55287 RNU7-61P-201ENST00000515897 61 ntBASIC0.03□□□□□ -2.4
CDH11P55287 RNU6-158P-201ENST00000517104 100 ntBASIC0.03□□□□□ -2.4
CDH11P55287 MIR4290-201ENST00000583807 95 ntBASIC0.03□□□□□ -2.4
CDH11P55287 MIR548O2-201ENST00000616090 70 ntBASIC0.03□□□□□ -2.4
CDH11P55287 Y_RNA.291-201ENST00000364886 113 ntBASIC0.02□□□□□ -2.41
CDH11P55287 MIR145-201ENST00000384967 88 ntBASIC0.02□□□□□ -2.41
CDH11P55287 MIR610-201ENST00000385139 96 ntBASIC0.02□□□□□ -2.41
CDH11P55287 RNU5B-6P-201ENST00000516765 68 ntBASIC0.02□□□□□ -2.41
CDH11P55287 MIR5190-201ENST00000581537 80 ntBASIC0.02□□□□□ -2.41
CDH11P55287 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
CDH11P55287 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.02□□□□□ -2.41
CDH11P55287 MIR216B-201ENST00000390186 82 ntBASIC0.01□□□□□ -2.41
CDH11P55287 MIR3064-201ENST00000581130 66 ntBASIC0.01□□□□□ -2.41
CDH11P55287 MIR548AE1-201ENST00000583292 70 ntBASIC0.01□□□□□ -2.41
CDH11P55287 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.01□□□□□ -2.41
CDH11P55287 MIR371B-201ENST00000638082 66 ntBASIC0.01□□□□□ -2.41
CDH11P55287 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0□□□□□ -2.41
CDH11P55287 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
CDH11P55287 SNORD116-10-201ENST00000363791 102 ntBASIC0□□□□□ -2.41
CDH11P55287 Y_RNA.374-201ENST00000365606 101 ntBASIC0□□□□□ -2.41
CDH11P55287 Y_RNA.544-201ENST00000384650 113 ntBASIC0□□□□□ -2.41
CDH11P55287 MIR593-201ENST00000384856 100 ntBASIC0□□□□□ -2.41
CDH11P55287 MIR451A-201ENST00000385059 72 ntBASIC0□□□□□ -2.41
CDH11P55287 U3.27-201ENST00000391237 200 ntBASIC0□□□□□ -2.41
CDH11P55287 MIR892B-201ENST00000401279 77 ntBASIC0□□□□□ -2.41
CDH11P55287 AL031737.1-201ENST00000450125 223 ntBASIC0□□□□□ -2.41
CDH11P55287 Y_RNA.677-201ENST00000516401 85 ntBASIC0□□□□□ -2.41
CDH11P55287 RNU6-180P-201ENST00000516697 61 ntBASIC0□□□□□ -2.41
CDH11P55287 SCARNA11.2-201ENST00000517183 154 ntBASIC0□□□□□ -2.41
CDH11P55287 MIR4473-201ENST00000583731 91 ntBASIC0□□□□□ -2.41
CDH11P55287 MIR450A1-201ENST00000362262 91 ntBASIC-0.01□□□□□ -2.41
CDH11P55287 SNORD114-5-201ENST00000362928 70 ntBASIC-0.01□□□□□ -2.41
CDH11P55287 MIR516B1-201ENST00000385211 90 ntBASIC-0.01□□□□□ -2.41
CDH11P55287 RNU6-519P-201ENST00000410590 108 ntBASIC-0.01□□□□□ -2.41
CDH11P55287 MTATP8P2-201ENST00000435212 202 ntBASIC-0.01□□□□□ -2.41
CDH11P55287 RNU6-919P-201ENST00000516731 104 ntBASIC-0.01□□□□□ -2.41
CDH11P55287 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.01□□□□□ -2.41
CDH11P55287 SNORA75.1-201ENST00000391130 148 ntBASIC-0.02□□□□□ -2.41
CDH11P55287 RNU7-165P-201ENST00000458864 60 ntBASIC-0.02□□□□□ -2.41
CDH11P55287 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
CDH11P55287 MIR548AI-201ENST00000579940 88 ntBASIC-0.02□□□□□ -2.41
CDH11P55287 AC104996.3-201ENST00000590718 94 ntBASIC-0.02□□□□□ -2.41
CDH11P55287 U7.3-201ENST00000616123 62 ntBASIC-0.02□□□□□ -2.41
CDH11P55287 uc_338.10-201ENST00000621872 182 ntBASIC-0.02□□□□□ -2.41
CDH11P55287 RNU6V-201ENST00000384105 107 ntBASIC-0.03□□□□□ -2.41
CDH11P55287 RNA5SP292-201ENST00000390974 118 ntBASIC-0.03□□□□□ -2.41
CDH11P55287 AC026421.1-201ENST00000519101 163 ntBASIC-0.03□□□□□ -2.41
CDH11P55287 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.03□□□□□ -2.41
CDH11P55287 AP001318.4-201ENST00000616637 121 ntBASIC-0.03□□□□□ -2.41
CDH11P55287 AC084368.1-201ENST00000620935 65 ntBASIC-0.03□□□□□ -2.41
CDH11P55287 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.04□□□□□ -2.42
CDH11P55287 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
CDH11P55287 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.04□□□□□ -2.42
CDH11P55287 RN7SL660P-201ENST00000614852 299 ntBASIC-0.04□□□□□ -2.42
CDH11P55287 SNORA63.4-201ENST00000362763 126 ntBASIC-0.05□□□□□ -2.42
CDH11P55287 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.05□□□□□ -2.42
CDH11P55287 RNU6-811P-201ENST00000384069 107 ntBASIC-0.05□□□□□ -2.42
CDH11P55287 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.05□□□□□ -2.42
CDH11P55287 SNORA24B-201ENST00000384176 131 ntBASIC-0.05□□□□□ -2.42
CDH11P55287 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.05□□□□□ -2.42
CDH11P55287 MIR548U-201ENST00000390728 81 ntBASIC-0.05□□□□□ -2.42
CDH11P55287 AL035461.1-201ENST00000421490 332 ntBASIC-0.05□□□□□ -2.42
CDH11P55287 RNU6-162P-201ENST00000516228 103 ntBASIC-0.05□□□□□ -2.42
CDH11P55287 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.05□□□□□ -2.42
CDH11P55287 SNORA63.2-201ENST00000362603 126 ntBASIC-0.06□□□□□ -2.42
CDH11P55287 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.06□□□□□ -2.42
CDH11P55287 RNA5SP163-201ENST00000410304 99 ntBASIC-0.06□□□□□ -2.42
CDH11P55287 RNU7-188P-201ENST00000517063 64 ntBASIC-0.06□□□□□ -2.42
CDH11P55287 CR383656.4-201ENST00000546909 122 ntBASIC-0.06□□□□□ -2.42
CDH11P55287 RNU6-147P-201ENST00000383983 107 ntBASIC-0.07□□□□□ -2.42
CDH11P55287 RNU6-175P-201ENST00000516896 107 ntBASIC-0.07□□□□□ -2.42
CDH11P55287 MIR3140-201ENST00000583685 90 ntBASIC-0.07□□□□□ -2.42
CDH11P55287 MIR2052-201ENST00000636055 55 ntBASIC-0.07□□□□□ -2.42
CDH11P55287 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.08□□□□□ -2.42
CDH11P55287 RNU6-54P-201ENST00000365563 107 ntBASIC-0.08□□□□□ -2.42
CDH11P55287 RNU6-154P-201ENST00000384306 106 ntBASIC-0.08□□□□□ -2.42
CDH11P55287 MIR652-201ENST00000385278 98 ntBASIC-0.08□□□□□ -2.42
CDH11P55287 SNORD90-201ENST00000391145 111 ntBASIC-0.08□□□□□ -2.42
CDH11P55287 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.08□□□□□ -2.42
CDH11P55287 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms