Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
ATXN1P54253 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ATXN1P54253 RNA5SP264-201ENST00000363115 107 ntBASIC1.41□□□□□ -2.18
ATXN1P54253 RNU6-396P-201ENST00000365369 105 ntBASIC1.41□□□□□ -2.18
ATXN1P54253 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ATXN1P54253 RNU6-1260P-201ENST00000362944 107 ntBASIC1.4□□□□□ -2.19
ATXN1P54253 RNU6-403P-201ENST00000363163 104 ntBASIC1.4□□□□□ -2.19
ATXN1P54253 RNU6-1039P-201ENST00000383931 107 ntBASIC1.4□□□□□ -2.19
ATXN1P54253 MIR630-201ENST00000384957 97 ntBASIC1.4□□□□□ -2.19
ATXN1P54253 MIR545-201ENST00000385085 106 ntBASIC1.4□□□□□ -2.19
ATXN1P54253 RNU6-935P-201ENST00000410371 100 ntBASIC1.4□□□□□ -2.19
ATXN1P54253 RNU6-274P-201ENST00000459566 107 ntBASIC1.4□□□□□ -2.19
ATXN1P54253 AC048334.1-201ENST00000477975 159 ntBASIC1.4□□□□□ -2.19
ATXN1P54253 RNU6-656P-201ENST00000516785 107 ntBASIC1.4□□□□□ -2.19
ATXN1P54253 AP003716.2-201ENST00000528260 108 ntBASIC1.4□□□□□ -2.19
ATXN1P54253 AC068338.1-201ENST00000565567 176 ntBASIC1.4□□□□□ -2.19
ATXN1P54253 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
ATXN1P54253 Y_RNA.68-201ENST00000362881 102 ntBASIC1.39□□□□□ -2.19
ATXN1P54253 RNU6-990P-201ENST00000364385 104 ntBASIC1.39□□□□□ -2.19
ATXN1P54253 MIR1185-1-201ENST00000408598 86 ntBASIC1.39□□□□□ -2.19
ATXN1P54253 SNORD42B-201ENST00000458893 67 ntBASIC1.39□□□□□ -2.19
ATXN1P54253 SNORA31.2-201ENST00000516019 134 ntBASIC1.39□□□□□ -2.19
ATXN1P54253 RNU6-287P-201ENST00000516230 98 ntBASIC1.39□□□□□ -2.19
ATXN1P54253 RNU6-1265P-201ENST00000516342 103 ntBASIC1.39□□□□□ -2.19
ATXN1P54253 MIR2115-201ENST00000516657 100 ntBASIC1.39□□□□□ -2.19
ATXN1P54253 MIR548AG2-201ENST00000581228 64 ntBASIC1.39□□□□□ -2.19
ATXN1P54253 RNU6-92P-201ENST00000605893 104 ntBASIC1.39□□□□□ -2.19
ATXN1P54253 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.39□□□□□ -2.19
ATXN1P54253 MIR6509-201ENST00000614603 85 ntBASIC1.39□□□□□ -2.19
ATXN1P54253 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
ATXN1P54253 Y_RNA.13-201ENST00000362403 112 ntBASIC1.38□□□□□ -2.19
ATXN1P54253 RNU1-36P-201ENST00000365130 165 ntBASIC1.38□□□□□ -2.19
ATXN1P54253 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.38□□□□□ -2.19
ATXN1P54253 MTND4LP1-201ENST00000446263 157 ntBASIC1.38□□□□□ -2.19
ATXN1P54253 RNU7-62P-201ENST00000458856 62 ntBASIC1.38□□□□□ -2.19
ATXN1P54253 RNU6-752P-201ENST00000516376 102 ntBASIC1.38□□□□□ -2.19
ATXN1P54253 RNU7-40P-201ENST00000516397 64 ntBASIC1.38□□□□□ -2.19
ATXN1P54253 MIR3657-201ENST00000584818 117 ntBASIC1.38□□□□□ -2.19
ATXN1P54253 AC073869.9-201ENST00000641610 120 ntBASIC1.38□□□□□ -2.19
ATXN1P54253 RNU4-58P-201ENST00000363192 141 ntBASIC1.37□□□□□ -2.19
ATXN1P54253 RNU6-54P-201ENST00000365563 107 ntBASIC1.37□□□□□ -2.19
ATXN1P54253 MIR216A-201ENST00000385063 110 ntBASIC1.37□□□□□ -2.19
ATXN1P54253 MIR519A1-201ENST00000385257 85 ntBASIC1.37□□□□□ -2.19
ATXN1P54253 RNU6-930P-201ENST00000390938 100 ntBASIC1.37□□□□□ -2.19
ATXN1P54253 SNORD93-201ENST00000408813 74 ntBASIC1.37□□□□□ -2.19
ATXN1P54253 MIR6516-201ENST00000630554 81 ntBASIC1.37□□□□□ -2.19
ATXN1P54253 MIR6767-201ENST00000637302 66 ntBASIC1.37□□□□□ -2.19
ATXN1P54253 RNU6-495P-201ENST00000362995 107 ntBASIC1.36□□□□□ -2.19
ATXN1P54253 RNU6-939P-201ENST00000384634 107 ntBASIC1.36□□□□□ -2.19
ATXN1P54253 MIR599-201ENST00000385069 95 ntBASIC1.36□□□□□ -2.19
ATXN1P54253 MIR618-201ENST00000385287 98 ntBASIC1.36□□□□□ -2.19
ATXN1P54253 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.36□□□□□ -2.19
ATXN1P54253 Y_RNA.433-201ENST00000384089 102 ntBASIC1.35□□□□□ -2.19
ATXN1P54253 SNORA25-201ENST00000384384 134 ntBASIC1.35□□□□□ -2.19
ATXN1P54253 MIR222-201ENST00000384992 110 ntBASIC1.35□□□□□ -2.19
ATXN1P54253 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
ATXN1P54253 RNU6-724P-201ENST00000390958 105 ntBASIC1.35□□□□□ -2.19
ATXN1P54253 SNORD75.2-201ENST00000408784 58 ntBASIC1.35□□□□□ -2.19
ATXN1P54253 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.35□□□□□ -2.19
ATXN1P54253 RNU6-1089P-201ENST00000516473 104 ntBASIC1.35□□□□□ -2.19
ATXN1P54253 SNORA70.22-201ENST00000517160 124 ntBASIC1.35□□□□□ -2.19
ATXN1P54253 MIR4264-201ENST00000583520 66 ntBASIC1.35□□□□□ -2.19
ATXN1P54253 U4.4-201ENST00000620626 117 ntBASIC1.35□□□□□ -2.19
ATXN1P54253 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
ATXN1P54253 RNU6-1335P-201ENST00000365426 107 ntBASIC1.34□□□□□ -2.19
ATXN1P54253 SNORA41B-201ENST00000384785 128 ntBASIC1.34□□□□□ -2.19
ATXN1P54253 MT-TN-201ENST00000387400 73 ntBASIC1.34□□□□□ -2.19
ATXN1P54253 MIR758-201ENST00000390227 88 ntBASIC1.34□□□□□ -2.19
ATXN1P54253 snoU13.13-201ENST00000458842 104 ntBASIC1.34□□□□□ -2.19
ATXN1P54253 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
ATXN1P54253 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.34□□□□□ -2.2
ATXN1P54253 MIR101-2-201ENST00000362195 79 ntBASIC1.33□□□□□ -2.2
ATXN1P54253 Y_RNA.56-201ENST00000362798 112 ntBASIC1.33□□□□□ -2.2
ATXN1P54253 RNU6-986P-201ENST00000363133 102 ntBASIC1.33□□□□□ -2.2
ATXN1P54253 Y_RNA.330-201ENST00000365230 109 ntBASIC1.33□□□□□ -2.2
ATXN1P54253 RNU6-910P-201ENST00000390844 107 ntBASIC1.33□□□□□ -2.2
ATXN1P54253 RNU6-1246P-201ENST00000391064 107 ntBASIC1.33□□□□□ -2.2
ATXN1P54253 AL157398.1-201ENST00000452981 186 ntBASIC1.33□□□□□ -2.2
ATXN1P54253 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
ATXN1P54253 RNU4-33P-201ENST00000364316 85 ntBASIC1.32□□□□□ -2.2
ATXN1P54253 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
ATXN1P54253 SNORA75.2-201ENST00000391138 150 ntBASIC1.32□□□□□ -2.2
ATXN1P54253 SNORA75.3-201ENST00000391231 150 ntBASIC1.32□□□□□ -2.2
ATXN1P54253 SNORD83.1-201ENST00000411362 77 ntBASIC1.32□□□□□ -2.2
ATXN1P54253 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.32□□□□□ -2.2
ATXN1P54253 MIR6082-201ENST00000613604 109 ntBASIC1.32□□□□□ -2.2
ATXN1P54253 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.32□□□□□ -2.2
ATXN1P54253 MIR377-201ENST00000362145 69 ntBASIC1.31□□□□□ -2.2
ATXN1P54253 RNA5SP457-201ENST00000363657 124 ntBASIC1.31□□□□□ -2.2
ATXN1P54253 Y_RNA.363-201ENST00000365529 113 ntBASIC1.31□□□□□ -2.2
ATXN1P54253 MT-TF-201ENST00000387314 71 ntBASIC1.31□□□□□ -2.2
ATXN1P54253 AC097635.1-201ENST00000450678 155 ntBASIC1.31□□□□□ -2.2
ATXN1P54253 MIR5000-201ENST00000577717 103 ntBASIC1.31□□□□□ -2.2
ATXN1P54253 MIR548H5-201ENST00000580314 60 ntBASIC1.31□□□□□ -2.2
ATXN1P54253 uc_338.10-201ENST00000621872 182 ntBASIC1.31□□□□□ -2.2
ATXN1P54253 SNORA80D-201ENST00000384488 135 ntBASIC1.3□□□□□ -2.2
ATXN1P54253 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
ATXN1P54253 SNORD113-2-201ENST00000391082 72 ntBASIC1.3□□□□□ -2.2
ATXN1P54253 AL591704.2-201ENST00000421658 181 ntBASIC1.3□□□□□ -2.2
ATXN1P54253 RNU7-185P-201ENST00000459215 60 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms