Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.8□□□□□ -2.54
MSH6P52701 U7.2-201ENST00000607576 63 ntBASIC-0.8□□□□□ -2.54
MSH6P52701 MIR4320-201ENST00000636981 65 ntBASIC-0.8□□□□□ -2.54
MSH6P52701 SNORD115-25-201ENST00000362619 82 ntBASIC-0.81□□□□□ -2.54
MSH6P52701 RNU6-816P-201ENST00000390914 107 ntBASIC-0.81□□□□□ -2.54
MSH6P52701 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.81□□□□□ -2.54
MSH6P52701 U3.27-201ENST00000391237 200 ntBASIC-0.81□□□□□ -2.54
MSH6P52701 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.81□□□□□ -2.54
MSH6P52701 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.81□□□□□ -2.54
MSH6P52701 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.82□□□□□ -2.54
MSH6P52701 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.82□□□□□ -2.54
MSH6P52701 SNORD116-18-201ENST00000383961 92 ntBASIC-0.82□□□□□ -2.54
MSH6P52701 RNU6-901P-201ENST00000384593 106 ntBASIC-0.82□□□□□ -2.54
MSH6P52701 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.82□□□□□ -2.54
MSH6P52701 RNA5SP169-201ENST00000517268 117 ntBASIC-0.82□□□□□ -2.54
MSH6P52701 SNORD114-4-201ENST00000363962 75 ntBASIC-0.83□□□□□ -2.54
MSH6P52701 AL445193.1-201ENST00000441183 141 ntBASIC-0.83□□□□□ -2.54
MSH6P52701 RNU6-75P-201ENST00000515944 104 ntBASIC-0.83□□□□□ -2.54
MSH6P52701 AC025166.1-201ENST00000612411 163 ntBASIC-0.83□□□□□ -2.54
MSH6P52701 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.83□□□□□ -2.54
MSH6P52701 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.83□□□□□ -2.54
MSH6P52701 SNORD114-3-201ENST00000364969 75 ntBASIC-0.83□□□□□ -2.54
MSH6P52701 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.83□□□□□ -2.54
MSH6P52701 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.83□□□□□ -2.54
MSH6P52701 MIR204-201ENST00000385200 110 ntBASIC-0.83□□□□□ -2.54
MSH6P52701 MT-TG-201ENST00000387429 68 ntBASIC-0.83□□□□□ -2.54
MSH6P52701 SNORA3B-201ENST00000391305 131 ntBASIC-0.83□□□□□ -2.54
MSH6P52701 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.83□□□□□ -2.54
MSH6P52701 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.83□□□□□ -2.54
MSH6P52701 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.83□□□□□ -2.54
MSH6P52701 MTND5P18-201ENST00000445624 1801 ntBASIC-0.84□□□□□ -2.54
MSH6P52701 RNU6-54P-201ENST00000365563 107 ntBASIC-0.84□□□□□ -2.54
MSH6P52701 RNY1P7-201ENST00000384743 110 ntBASIC-0.84□□□□□ -2.54
MSH6P52701 MIR451A-201ENST00000385059 72 ntBASIC-0.84□□□□□ -2.54
MSH6P52701 RNU6-388P-201ENST00000517012 105 ntBASIC-0.84□□□□□ -2.54
MSH6P52701 RNU6-389P-201ENST00000517048 105 ntBASIC-0.84□□□□□ -2.54
MSH6P52701 SNORA40.17-201ENST00000517256 115 ntBASIC-0.84□□□□□ -2.54
MSH6P52701 MIR569-201ENST00000385228 96 ntBASIC-0.85□□□□□ -2.55
MSH6P52701 MIR3144-201ENST00000579460 79 ntBASIC-0.85□□□□□ -2.55
MSH6P52701 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.85□□□□□ -2.55
MSH6P52701 MIR6851-201ENST00000617060 67 ntBASIC-0.85□□□□□ -2.55
MSH6P52701 SNORD58C-201ENST00000365223 64 ntBASIC-0.86□□□□□ -2.55
MSH6P52701 MIR582-201ENST00000365731 98 ntBASIC-0.86□□□□□ -2.55
MSH6P52701 RNU6-804P-201ENST00000384286 107 ntBASIC-0.86□□□□□ -2.55
MSH6P52701 MIR577-201ENST00000385196 96 ntBASIC-0.86□□□□□ -2.55
MSH6P52701 snoU13.13-201ENST00000458842 104 ntBASIC-0.86□□□□□ -2.55
MSH6P52701 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.87□□□□□ -2.55
MSH6P52701 SNORD50.2-201ENST00000365465 70 ntBASIC-0.87□□□□□ -2.55
MSH6P52701 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.87□□□□□ -2.55
MSH6P52701 MIR196A1-201ENST00000388006 70 ntBASIC-0.87□□□□□ -2.55
MSH6P52701 MIR548E-201ENST00000408287 88 ntBASIC-0.87□□□□□ -2.55
MSH6P52701 SNORD38.3-201ENST00000516599 73 ntBASIC-0.87□□□□□ -2.55
MSH6P52701 RNU6-762P-201ENST00000517107 102 ntBASIC-0.87□□□□□ -2.55
MSH6P52701 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.87□□□□□ -2.55
MSH6P52701 MIR4536-1-201ENST00000583537 88 ntBASIC-0.87□□□□□ -2.55
MSH6P52701 RNU6-86P-201ENST00000606534 107 ntBASIC-0.87□□□□□ -2.55
MSH6P52701 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.87□□□□□ -2.55
MSH6P52701 AC025521.1-201ENST00000621624 286 ntBASIC-0.87□□□□□ -2.55
MSH6P52701 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.88□□□□□ -2.55
MSH6P52701 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.88□□□□□ -2.55
MSH6P52701 SNORD42B-201ENST00000458893 67 ntBASIC-0.88□□□□□ -2.55
MSH6P52701 RNU6-502P-201ENST00000362419 108 ntBASIC-0.89□□□□□ -2.55
MSH6P52701 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.89□□□□□ -2.55
MSH6P52701 SNORA13-201ENST00000458790 133 ntBASIC-0.89□□□□□ -2.55
MSH6P52701 AC021146.6-201ENST00000514659 117 ntBASIC-0.89□□□□□ -2.55
MSH6P52701 RNU6-65P-201ENST00000516332 98 ntBASIC-0.89□□□□□ -2.55
MSH6P52701 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.89□□□□□ -2.55
MSH6P52701 MIR378F-201ENST00000578143 78 ntBASIC-0.89□□□□□ -2.55
MSH6P52701 MIR4679-2-201ENST00000578358 77 ntBASIC-0.89□□□□□ -2.55
MSH6P52701 MIR4694-201ENST00000578534 80 ntBASIC-0.89□□□□□ -2.55
MSH6P52701 MIR4324-201ENST00000584846 72 ntBASIC-0.89□□□□□ -2.55
MSH6P52701 RNU6-973P-201ENST00000364690 107 ntBASIC-0.9□□□□□ -2.55
MSH6P52701 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.9□□□□□ -2.55
MSH6P52701 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.9□□□□□ -2.55
MSH6P52701 RNU6-476P-201ENST00000384726 107 ntBASIC-0.9□□□□□ -2.55
MSH6P52701 RNU6-832P-201ENST00000363319 107 ntBASIC-0.91□□□□□ -2.55
MSH6P52701 RNU6-10P-201ENST00000384036 107 ntBASIC-0.91□□□□□ -2.55
MSH6P52701 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.91□□□□□ -2.55
MSH6P52701 SCARNA17-201ENST00000516183 144 ntBASIC-0.91□□□□□ -2.55
MSH6P52701 RNU6-719P-201ENST00000516671 104 ntBASIC-0.91□□□□□ -2.55
MSH6P52701 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.92□□□□□ -2.56
MSH6P52701 RNU7-85P-201ENST00000458851 63 ntBASIC-0.92□□□□□ -2.56
MSH6P52701 RNA5SP272-201ENST00000516095 111 ntBASIC-0.92□□□□□ -2.56
MSH6P52701 MIR6738-201ENST00000619620 64 ntBASIC-0.92□□□□□ -2.56
MSH6P52701 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.93□□□□□ -2.56
MSH6P52701 AC097510.1-201ENST00000510945 133 ntBASIC-0.93□□□□□ -2.56
MSH6P52701 AL513043.2-201ENST00000573941 143 ntBASIC-0.93□□□□□ -2.56
MSH6P52701 RNY3P2-201ENST00000362918 102 ntBASIC-0.94□□□□□ -2.56
MSH6P52701 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.94□□□□□ -2.56
MSH6P52701 MIR518B-201ENST00000385127 83 ntBASIC-0.94□□□□□ -2.56
MSH6P52701 MIR3613-201ENST00000579844 87 ntBASIC-0.94□□□□□ -2.56
MSH6P52701 MIR4439-201ENST00000583746 80 ntBASIC-0.94□□□□□ -2.56
MSH6P52701 AL353621.2-201ENST00000605340 133 ntBASIC-0.94□□□□□ -2.56
MSH6P52701 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.95□□□□□ -2.56
MSH6P52701 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.95□□□□□ -2.56
MSH6P52701 FGF7P7-201ENST00000514120 227 ntBASIC-0.95□□□□□ -2.56
MSH6P52701 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.95□□□□□ -2.56
MSH6P52701 RNU6-426P-201ENST00000516464 97 ntBASIC-0.95□□□□□ -2.56
MSH6P52701 RNU6-182P-201ENST00000516970 105 ntBASIC-0.95□□□□□ -2.56
MSH6P52701 MIR4719-201ENST00000585233 84 ntBASIC-0.95□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 285.5 ms