Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 MIR3170-201ENST00000582699 77 ntBASIC-3.04□□□□□ -2.9
CLIP1P30622 RPS29P30-201ENST00000600975 111 ntBASIC-3.04□□□□□ -2.9
CLIP1P30622 DLEU2_3.2-201ENST00000612883 73 ntBASIC-3.04□□□□□ -2.9
CLIP1P30622 Y_RNA.41-201ENST00000362646 102 ntBASIC-3.05□□□□□ -2.9
CLIP1P30622 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.05□□□□□ -2.9
CLIP1P30622 RNA5SP292-201ENST00000390974 118 ntBASIC-3.05□□□□□ -2.9
CLIP1P30622 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.06□□□□□ -2.9
CLIP1P30622 Y_RNA.339-201ENST00000365325 102 ntBASIC-3.06□□□□□ -2.9
CLIP1P30622 Y_RNA.646-201ENST00000410980 101 ntBASIC-3.06□□□□□ -2.9
CLIP1P30622 MTATP6P29-201ENST00000415057 132 ntBASIC-3.06□□□□□ -2.9
CLIP1P30622 RN7SKP298-201ENST00000515950 94 ntBASIC-3.06□□□□□ -2.9
CLIP1P30622 RNU6-1018P-201ENST00000516577 106 ntBASIC-3.06□□□□□ -2.9
CLIP1P30622 MIR4272-201ENST00000635924 64 ntBASIC-3.06□□□□□ -2.9
CLIP1P30622 RNU6-508P-201ENST00000363231 103 ntBASIC-3.07□□□□□ -2.9
CLIP1P30622 MT-TW-201ENST00000387382 68 ntBASIC-3.07□□□□□ -2.9
CLIP1P30622 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.07□□□□□ -2.9
CLIP1P30622 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.07□□□□□ -2.9
CLIP1P30622 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.07□□□□□ -2.9
CLIP1P30622 AL442128.1-201ENST00000615151 90 ntBASIC-3.07□□□□□ -2.9
CLIP1P30622 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.07□□□□□ -2.9
CLIP1P30622 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.07□□□□□ -2.9
CLIP1P30622 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.07□□□□□ -2.9
CLIP1P30622 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.08□□□□□ -2.9
CLIP1P30622 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.08□□□□□ -2.9
CLIP1P30622 MIR548I1-201ENST00000408810 149 ntBASIC-3.08□□□□□ -2.9
CLIP1P30622 MTND4LP30-201ENST00000454092 297 ntBASIC-3.08□□□□□ -2.9
CLIP1P30622 Y_RNA.651-201ENST00000459380 103 ntBASIC-3.08□□□□□ -2.9
CLIP1P30622 AL513043.2-201ENST00000573941 143 ntBASIC-3.08□□□□□ -2.9
CLIP1P30622 MIR3163-201ENST00000581592 73 ntBASIC-3.08□□□□□ -2.9
CLIP1P30622 U2.18-201ENST00000622185 84 ntBASIC-3.08□□□□□ -2.9
CLIP1P30622 SNORD81.2-201ENST00000365153 76 ntBASIC-3.09□□□□□ -2.9
CLIP1P30622 RNU6-890P-201ENST00000384121 107 ntBASIC-3.09□□□□□ -2.9
CLIP1P30622 Y_RNA.582-201ENST00000391023 95 ntBASIC-3.09□□□□□ -2.9
CLIP1P30622 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.09□□□□□ -2.9
CLIP1P30622 RNU6-656P-201ENST00000516785 107 ntBASIC-3.09□□□□□ -2.9
CLIP1P30622 Y_RNA.699-201ENST00000516803 93 ntBASIC-3.09□□□□□ -2.9
CLIP1P30622 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-3.09□□□□□ -2.9
CLIP1P30622 AL137067.1-201ENST00000615933 120 ntBASIC-3.09□□□□□ -2.9
CLIP1P30622 RNU6-363P-201ENST00000362895 105 ntBASIC-3.1□□□□□ -2.91
CLIP1P30622 Y_RNA.75-201ENST00000362927 97 ntBASIC-3.1□□□□□ -2.91
CLIP1P30622 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.1□□□□□ -2.91
CLIP1P30622 AC099799.1-201ENST00000439809 192 ntBASIC-3.1□□□□□ -2.91
CLIP1P30622 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-3.1□□□□□ -2.91
CLIP1P30622 AC005520.4-201ENST00000604337 90 ntBASIC-3.1□□□□□ -2.91
CLIP1P30622 MIR376A1-201ENST00000616574 68 ntBASIC-3.1□□□□□ -2.91
CLIP1P30622 RNU6-310P-201ENST00000384655 107 ntBASIC-3.1□□□□□ -2.91
CLIP1P30622 RNU6-373P-201ENST00000411247 98 ntBASIC-3.1□□□□□ -2.91
CLIP1P30622 SNORA18.5-201ENST00000516616 101 ntBASIC-3.1□□□□□ -2.91
CLIP1P30622 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.1□□□□□ -2.91
CLIP1P30622 RNU6-326P-201ENST00000365480 107 ntBASIC-3.11□□□□□ -2.91
CLIP1P30622 RNU6-1289P-201ENST00000384431 106 ntBASIC-3.11□□□□□ -2.91
CLIP1P30622 AC025253.1-201ENST00000613623 543 ntBASIC-3.11□□□□□ -2.91
CLIP1P30622 Y_RNA.31-201ENST00000362574 102 ntBASIC-3.12□□□□□ -2.91
CLIP1P30622 RNU6-247P-201ENST00000362636 107 ntBASIC-3.12□□□□□ -2.91
CLIP1P30622 Y_RNA.74-201ENST00000362911 99 ntBASIC-3.12□□□□□ -2.91
CLIP1P30622 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.12□□□□□ -2.91
CLIP1P30622 RNU6-290P-201ENST00000365212 101 ntBASIC-3.12□□□□□ -2.91
CLIP1P30622 RNU6-1283P-201ENST00000365314 105 ntBASIC-3.12□□□□□ -2.91
CLIP1P30622 MIR548C-201ENST00000384815 97 ntBASIC-3.12□□□□□ -2.91
CLIP1P30622 MIR548A3-201ENST00000385297 97 ntBASIC-3.12□□□□□ -2.91
CLIP1P30622 RNU6-141P-201ENST00000410499 105 ntBASIC-3.12□□□□□ -2.91
CLIP1P30622 MIR548Z-201ENST00000584743 97 ntBASIC-3.12□□□□□ -2.91
CLIP1P30622 U6.81-201ENST00000612550 106 ntBASIC-3.12□□□□□ -2.91
CLIP1P30622 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.12□□□□□ -2.91
CLIP1P30622 Y_RNA.163-201ENST00000363702 113 ntBASIC-3.13□□□□□ -2.91
CLIP1P30622 RNU6-409P-201ENST00000384114 104 ntBASIC-3.13□□□□□ -2.91
CLIP1P30622 SNORD4B-201ENST00000459083 72 ntBASIC-3.13□□□□□ -2.91
CLIP1P30622 RNU6-1271P-201ENST00000517049 105 ntBASIC-3.13□□□□□ -2.91
CLIP1P30622 AC124864.2-201ENST00000624736 186 ntBASIC-3.13□□□□□ -2.91
CLIP1P30622 RNU5F-1-201ENST00000362507 117 ntBASIC-3.14□□□□□ -2.91
CLIP1P30622 Y_RNA.155-201ENST00000363632 101 ntBASIC-3.14□□□□□ -2.91
CLIP1P30622 MTND1P29-201ENST00000448112 647 ntBASIC-3.14□□□□□ -2.91
CLIP1P30622 AL118496.2-201ENST00000448300 230 ntBASIC-3.14□□□□□ -2.91
CLIP1P30622 RNU6-415P-201ENST00000516252 97 ntBASIC-3.14□□□□□ -2.91
CLIP1P30622 AC080013.6-201ENST00000606185 215 ntBASIC-3.14□□□□□ -2.91
CLIP1P30622 AC037487.3-201ENST00000606668 112 ntBASIC-3.14□□□□□ -2.91
CLIP1P30622 MIR429-201ENST00000362106 83 ntBASIC-3.15□□□□□ -2.91
CLIP1P30622 RNU6-238P-201ENST00000363313 106 ntBASIC-3.15□□□□□ -2.91
CLIP1P30622 RNU6-103P-201ENST00000363686 107 ntBASIC-3.15□□□□□ -2.91
CLIP1P30622 RNU6-643P-201ENST00000384018 107 ntBASIC-3.15□□□□□ -2.91
CLIP1P30622 Y_RNA.690-201ENST00000516603 95 ntBASIC-3.15□□□□□ -2.91
CLIP1P30622 RNU6-699P-201ENST00000517081 110 ntBASIC-3.15□□□□□ -2.91
CLIP1P30622 Y_RNA.721-201ENST00000517207 102 ntBASIC-3.15□□□□□ -2.91
CLIP1P30622 AL050303.3-201ENST00000613704 284 ntBASIC-3.15□□□□□ -2.91
CLIP1P30622 AC015540.1-201ENST00000615828 501 ntBASIC-3.15□□□□□ -2.91
CLIP1P30622 MIR559-201ENST00000385188 96 ntBASIC-3.16□□□□□ -2.92
CLIP1P30622 SNORD115-46-201ENST00000390982 71 ntBASIC-3.16□□□□□ -2.92
CLIP1P30622 RNU6-1009P-201ENST00000390996 107 ntBASIC-3.16□□□□□ -2.92
CLIP1P30622 MIR4744-201ENST00000581563 82 ntBASIC-3.16□□□□□ -2.92
CLIP1P30622 RNU6-309P-201ENST00000364573 106 ntBASIC-3.17□□□□□ -2.92
CLIP1P30622 Y_RNA.325-201ENST00000365171 122 ntBASIC-3.17□□□□□ -2.92
CLIP1P30622 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.17□□□□□ -2.92
CLIP1P30622 Y_RNA.581-201ENST00000391017 97 ntBASIC-3.17□□□□□ -2.92
CLIP1P30622 SNORD116-1-201ENST00000384335 95 ntBASIC-3.18□□□□□ -2.92
CLIP1P30622 RNU4-14P-201ENST00000410858 122 ntBASIC-3.18□□□□□ -2.92
CLIP1P30622 RNU6-694P-201ENST00000364071 147 ntBASIC-3.19□□□□□ -2.92
CLIP1P30622 RNU6-818P-201ENST00000364837 108 ntBASIC-3.19□□□□□ -2.92
CLIP1P30622 SNORA20.3-201ENST00000516880 132 ntBASIC-3.19□□□□□ -2.92
CLIP1P30622 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.19□□□□□ -2.92
CLIP1P30622 SNORD18C-201ENST00000362704 69 ntBASIC-3.19□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 238.7 ms