Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MIR548U-201ENST00000390728 81 ntBASIC-3.98□□□□□ -3.05
HMGA1P17096 SNORD90-201ENST00000391145 111 ntBASIC-3.98□□□□□ -3.05
HMGA1P17096 RNU6-530P-201ENST00000391180 107 ntBASIC-3.98□□□□□ -3.05
HMGA1P17096 RNU7-85P-201ENST00000458851 63 ntBASIC-3.98□□□□□ -3.05
HMGA1P17096 MIR3064-201ENST00000581130 66 ntBASIC-3.98□□□□□ -3.05
HMGA1P17096 SNORD113-5-201ENST00000607261 78 ntBASIC-3.98□□□□□ -3.05
HMGA1P17096 U2.18-201ENST00000622185 84 ntBASIC-3.98□□□□□ -3.05
HMGA1P17096 MIR1321-201ENST00000637766 79 ntBASIC-3.98□□□□□ -3.05
HMGA1P17096 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-3.99□□□□□ -3.05
HMGA1P17096 SNORD113-6-201ENST00000363345 75 ntBASIC-3.99□□□□□ -3.05
HMGA1P17096 RNY3P3-201ENST00000363816 102 ntBASIC-3.99□□□□□ -3.05
HMGA1P17096 snoU2_19.4-201ENST00000364329 80 ntBASIC-3.99□□□□□ -3.05
HMGA1P17096 RNU6-309P-201ENST00000364573 106 ntBASIC-3.99□□□□□ -3.05
HMGA1P17096 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.99□□□□□ -3.05
HMGA1P17096 RNU6-1109P-201ENST00000391187 107 ntBASIC-3.99□□□□□ -3.05
HMGA1P17096 MTND3P10-201ENST00000450967 341 ntBASIC-3.99□□□□□ -3.05
HMGA1P17096 RNU7-4P-201ENST00000516961 62 ntBASIC-3.99□□□□□ -3.05
HMGA1P17096 Y_RNA.158-201ENST00000363651 101 ntBASIC-4□□□□□ -3.05
HMGA1P17096 Y_RNA.217-201ENST00000364214 105 ntBASIC-4□□□□□ -3.05
HMGA1P17096 SNORD63-201ENST00000384262 68 ntBASIC-4□□□□□ -3.05
HMGA1P17096 RNU6-665P-201ENST00000384639 107 ntBASIC-4□□□□□ -3.05
HMGA1P17096 RNY3P10-201ENST00000384764 102 ntBASIC-4□□□□□ -3.05
HMGA1P17096 MIR548C-201ENST00000384815 97 ntBASIC-4□□□□□ -3.05
HMGA1P17096 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-4□□□□□ -3.05
HMGA1P17096 Y_RNA.599-201ENST00000410489 109 ntBASIC-4□□□□□ -3.05
HMGA1P17096 Y_RNA.641-201ENST00000459414 105 ntBASIC-4□□□□□ -3.05
HMGA1P17096 RNU6-912P-201ENST00000363800 104 ntBASIC-4.01□□□□□ -3.05
HMGA1P17096 RNU6-816P-201ENST00000390914 107 ntBASIC-4.01□□□□□ -3.05
HMGA1P17096 RNU6-1268P-201ENST00000391214 107 ntBASIC-4.01□□□□□ -3.05
HMGA1P17096 RNU6-1239P-201ENST00000391310 107 ntBASIC-4.01□□□□□ -3.05
HMGA1P17096 RNY4P20-201ENST00000516678 93 ntBASIC-4.01□□□□□ -3.05
HMGA1P17096 MTRNR2L9-201ENST00000622562 75 ntBASIC-4.01□□□□□ -3.05
HMGA1P17096 snoU18.1-201ENST00000629629 71 ntBASIC-4.01□□□□□ -3.05
HMGA1P17096 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.02□□□□□ -3.05
HMGA1P17096 Y_RNA.281-201ENST00000364774 94 ntBASIC-4.02□□□□□ -3.05
HMGA1P17096 MIR616-201ENST00000385293 97 ntBASIC-4.02□□□□□ -3.05
HMGA1P17096 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-4.02□□□□□ -3.05
HMGA1P17096 AP003461.1-201ENST00000528866 78 ntBASIC-4.02□□□□□ -3.05
HMGA1P17096 AC040904.1-201ENST00000590850 223 ntBASIC-4.02□□□□□ -3.05
HMGA1P17096 AC092794.1-201ENST00000612734 582 ntBASIC-4.02□□□□□ -3.05
HMGA1P17096 AL365265.1-201ENST00000621045 234 ntBASIC-4.02□□□□□ -3.05
HMGA1P17096 MIR6739-201ENST00000622461 75 ntBASIC-4.02□□□□□ -3.05
HMGA1P17096 Y_RNA.47-201ENST00000362697 108 ntBASIC-4.03□□□□□ -3.05
HMGA1P17096 Y_RNA.109-201ENST00000363215 102 ntBASIC-4.03□□□□□ -3.05
HMGA1P17096 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-4.03□□□□□ -3.05
HMGA1P17096 RNU6-332P-201ENST00000391193 108 ntBASIC-4.03□□□□□ -3.05
HMGA1P17096 MIR1254-1-201ENST00000408257 97 ntBASIC-4.03□□□□□ -3.05
HMGA1P17096 AC104996.3-201ENST00000590718 94 ntBASIC-4.03□□□□□ -3.05
HMGA1P17096 DLEU2_3.2-201ENST00000612883 73 ntBASIC-4.03□□□□□ -3.05
HMGA1P17096 U6.106-201ENST00000636360 105 ntBASIC-4.03□□□□□ -3.05
HMGA1P17096 RNU6-911P-201ENST00000516523 104 ntBASIC-4.04□□□□□ -3.06
HMGA1P17096 MIR429-201ENST00000362106 83 ntBASIC-4.05□□□□□ -3.06
HMGA1P17096 RNU6-1313P-201ENST00000362622 102 ntBASIC-4.05□□□□□ -3.06
HMGA1P17096 MIR548N-201ENST00000408742 75 ntBASIC-4.05□□□□□ -3.06
HMGA1P17096 MTND5P5-201ENST00000503764 376 ntBASIC-4.05□□□□□ -3.06
HMGA1P17096 U2.7-201ENST00000619197 100 ntBASIC-4.05□□□□□ -3.06
HMGA1P17096 SNORD50.2-201ENST00000365465 70 ntBASIC-4.06□□□□□ -3.06
HMGA1P17096 AL445567.1-201ENST00000439121 144 ntBASIC-4.06□□□□□ -3.06
HMGA1P17096 Y_RNA.639-201ENST00000458981 102 ntBASIC-4.06□□□□□ -3.06
HMGA1P17096 RNU6-807P-201ENST00000516805 107 ntBASIC-4.06□□□□□ -3.06
HMGA1P17096 Y_RNA.144-201ENST00000363521 113 ntBASIC-4.07□□□□□ -3.06
HMGA1P17096 SNORD115-37-201ENST00000363768 82 ntBASIC-4.07□□□□□ -3.06
HMGA1P17096 Y_RNA.314-201ENST00000365114 102 ntBASIC-4.07□□□□□ -3.06
HMGA1P17096 Y_RNA.395-201ENST00000383945 109 ntBASIC-4.07□□□□□ -3.06
HMGA1P17096 SNORD115-45-201ENST00000391078 81 ntBASIC-4.07□□□□□ -3.06
HMGA1P17096 Y_RNA.668-201ENST00000516233 93 ntBASIC-4.07□□□□□ -3.06
HMGA1P17096 MTATP6P25-201ENST00000574491 261 ntBASIC-4.07□□□□□ -3.06
HMGA1P17096 RNU6-151P-201ENST00000364158 107 ntBASIC-4.08□□□□□ -3.06
HMGA1P17096 MIR759-201ENST00000390224 91 ntBASIC-4.08□□□□□ -3.06
HMGA1P17096 MTND2P14-201ENST00000482139 351 ntBASIC-4.08□□□□□ -3.06
HMGA1P17096 Y_RNA.64-201ENST00000362845 102 ntBASIC-4.09□□□□□ -3.06
HMGA1P17096 RNU6-593P-201ENST00000364716 112 ntBASIC-4.09□□□□□ -3.06
HMGA1P17096 Y_RNA.401-201ENST00000383965 117 ntBASIC-4.09□□□□□ -3.06
HMGA1P17096 RNU6-643P-201ENST00000384018 107 ntBASIC-4.09□□□□□ -3.06
HMGA1P17096 Y_RNA.604-201ENST00000410574 102 ntBASIC-4.09□□□□□ -3.06
HMGA1P17096 Y_RNA.682-201ENST00000516457 100 ntBASIC-4.09□□□□□ -3.06
HMGA1P17096 MIR548AJ2-201ENST00000408539 92 ntBASIC-4.1□□□□□ -3.07
HMGA1P17096 Y_RNA.602-201ENST00000410535 92 ntBASIC-4.1□□□□□ -3.07
HMGA1P17096 Y_RNA.797-201ENST00000515977 94 ntBASIC-4.1□□□□□ -3.07
HMGA1P17096 RNU6-68P-201ENST00000516576 104 ntBASIC-4.1□□□□□ -3.07
HMGA1P17096 RNU6-264P-201ENST00000517134 104 ntBASIC-4.1□□□□□ -3.07
HMGA1P17096 Y_RNA.279-201ENST00000364763 95 ntBASIC-4.11□□□□□ -3.07
HMGA1P17096 MIR548I1-201ENST00000408810 149 ntBASIC-4.11□□□□□ -3.07
HMGA1P17096 AC093424.1-201ENST00000604999 338 ntBASIC-4.11□□□□□ -3.07
HMGA1P17096 AC138305.3-201ENST00000624988 240 ntBASIC-4.11□□□□□ -3.07
HMGA1P17096 RNU6-1081P-201ENST00000384537 107 ntBASIC-4.12□□□□□ -3.07
HMGA1P17096 RNA5SP292-201ENST00000390974 118 ntBASIC-4.12□□□□□ -3.07
HMGA1P17096 RNU4-43P-201ENST00000410628 137 ntBASIC-4.12□□□□□ -3.07
HMGA1P17096 SEPT14P3-201ENST00000439401 183 ntBASIC-4.12□□□□□ -3.07
HMGA1P17096 AL732372.2-207ENST00000445840 183 ntBASIC-4.12□□□□□ -3.07
HMGA1P17096 AL121914.1-201ENST00000450188 156 ntBASIC-4.12□□□□□ -3.07
HMGA1P17096 SEPT14P2-201ENST00000453405 183 ntBASIC-4.12□□□□□ -3.07
HMGA1P17096 FO082796.1-201ENST00000523795 183 ntBASIC-4.12□□□□□ -3.07
HMGA1P17096 RNU6-645P-201ENST00000364649 106 ntBASIC-4.13□□□□□ -3.07
HMGA1P17096 Y_RNA.282-201ENST00000364793 102 ntBASIC-4.13□□□□□ -3.07
HMGA1P17096 RNU6-737P-201ENST00000365370 107 ntBASIC-4.13□□□□□ -3.07
HMGA1P17096 SNORD60-201ENST00000383903 83 ntBASIC-4.13□□□□□ -3.07
HMGA1P17096 RNU6-211P-201ENST00000384047 107 ntBASIC-4.13□□□□□ -3.07
HMGA1P17096 RNU6-1013P-201ENST00000384180 107 ntBASIC-4.13□□□□□ -3.07
HMGA1P17096 MIR548AA1-201ENST00000384971 97 ntBASIC-4.13□□□□□ -3.07
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms