Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RNU6-979P-201ENST00000383896 107 ntBASIC0.73□□□□□ -2.29
SNRPA1P09661 SNORA8.2-201ENST00000384372 139 ntBASIC0.73□□□□□ -2.29
SNRPA1P09661 MIR451A-201ENST00000385059 72 ntBASIC0.73□□□□□ -2.29
SNRPA1P09661 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
SNRPA1P09661 AC098934.3-201ENST00000430450 190 ntBASIC0.73□□□□□ -2.29
SNRPA1P09661 AC093729.1-201ENST00000513074 128 ntBASIC0.73□□□□□ -2.29
SNRPA1P09661 FGF7P7-201ENST00000514120 227 ntBASIC0.72□□□□□ -2.29
SNRPA1P09661 RNU6-1057P-201ENST00000517162 102 ntBASIC0.72□□□□□ -2.29
SNRPA1P09661 SNORA25.18-201ENST00000607153 114 ntBASIC0.72□□□□□ -2.29
SNRPA1P09661 Y_RNA.205-201ENST00000364128 113 ntBASIC0.71□□□□□ -2.3
SNRPA1P09661 RNA5SP173-201ENST00000364857 136 ntBASIC0.71□□□□□ -2.3
SNRPA1P09661 RNU6-242P-201ENST00000384359 107 ntBASIC0.71□□□□□ -2.3
SNRPA1P09661 MIR617-201ENST00000385030 97 ntBASIC0.71□□□□□ -2.3
SNRPA1P09661 MIR519E-201ENST00000385075 84 ntBASIC0.71□□□□□ -2.3
SNRPA1P09661 RNU6-269P-201ENST00000391077 97 ntBASIC0.71□□□□□ -2.3
SNRPA1P09661 RNU6-1052P-201ENST00000411398 104 ntBASIC0.71□□□□□ -2.3
SNRPA1P09661 SNORA25.13-201ENST00000516395 103 ntBASIC0.71□□□□□ -2.3
SNRPA1P09661 RNU6-719P-201ENST00000516671 104 ntBASIC0.71□□□□□ -2.3
SNRPA1P09661 RNU6-573P-201ENST00000383938 106 ntBASIC0.7□□□□□ -2.3
SNRPA1P09661 Y_RNA.426-201ENST00000384068 113 ntBASIC0.7□□□□□ -2.3
SNRPA1P09661 RNU6-1152P-201ENST00000384576 107 ntBASIC0.7□□□□□ -2.3
SNRPA1P09661 MIR3140-201ENST00000583685 90 ntBASIC0.7□□□□□ -2.3
SNRPA1P09661 RNU6-1276P-201ENST00000365372 104 ntBASIC0.69□□□□□ -2.3
SNRPA1P09661 AC140658.3-201ENST00000567603 271 ntBASIC0.69□□□□□ -2.3
SNRPA1P09661 AC243829.3-201ENST00000622177 108 ntBASIC0.69□□□□□ -2.3
SNRPA1P09661 RNU6-1051P-201ENST00000365471 102 ntBASIC0.68□□□□□ -2.3
SNRPA1P09661 AL162376.1-201ENST00000624117 175 ntBASIC0.68□□□□□ -2.3
SNRPA1P09661 SNORD114-23-201ENST00000363536 72 ntBASIC0.67□□□□□ -2.3
SNRPA1P09661 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
SNRPA1P09661 SNORA40.8-201ENST00000411034 126 ntBASIC0.67□□□□□ -2.3
SNRPA1P09661 RNU7-74P-201ENST00000459104 62 ntBASIC0.67□□□□□ -2.3
SNRPA1P09661 RNU7-171P-201ENST00000459581 62 ntBASIC0.67□□□□□ -2.3
SNRPA1P09661 SNORA72.7-201ENST00000516349 94 ntBASIC0.67□□□□□ -2.3
SNRPA1P09661 RNU4-54P-201ENST00000516428 129 ntBASIC0.67□□□□□ -2.3
SNRPA1P09661 RNU6-229P-201ENST00000516614 102 ntBASIC0.67□□□□□ -2.3
SNRPA1P09661 MIR4752-201ENST00000579672 72 ntBASIC0.67□□□□□ -2.3
SNRPA1P09661 RNU6-945P-201ENST00000383947 107 ntBASIC0.66□□□□□ -2.3
SNRPA1P09661 Y_RNA.607-201ENST00000410597 98 ntBASIC0.66□□□□□ -2.3
SNRPA1P09661 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
SNRPA1P09661 SNORA63.2-201ENST00000362603 126 ntBASIC0.65□□□□□ -2.31
SNRPA1P09661 SNORD118-201ENST00000363593 134 ntBASIC0.65□□□□□ -2.31
SNRPA1P09661 SNORD71-201ENST00000411292 86 ntBASIC0.65□□□□□ -2.31
SNRPA1P09661 AC069271.1-201ENST00000445577 156 ntBASIC0.65□□□□□ -2.31
SNRPA1P09661 RNA5SP484-201ENST00000458857 111 ntBASIC0.65□□□□□ -2.31
SNRPA1P09661 MIR193B-201ENST00000384907 83 ntBASIC0.64□□□□□ -2.31
SNRPA1P09661 MIR518A1-201ENST00000385068 85 ntBASIC0.64□□□□□ -2.31
SNRPA1P09661 RNA5SP121-201ENST00000516537 101 ntBASIC0.64□□□□□ -2.31
SNRPA1P09661 AC010487.4-201ENST00000637027 61 ntBASIC0.64□□□□□ -2.31
SNRPA1P09661 RNU1-141P-201ENST00000364623 158 ntBASIC0.63□□□□□ -2.31
SNRPA1P09661 RNY4P3-201ENST00000365254 95 ntBASIC0.63□□□□□ -2.31
SNRPA1P09661 Y_RNA.437-201ENST00000384113 113 ntBASIC0.63□□□□□ -2.31
SNRPA1P09661 AC093423.1-201ENST00000440817 142 ntBASIC0.63□□□□□ -2.31
SNRPA1P09661 AL450471.1-201ENST00000447509 127 ntBASIC0.63□□□□□ -2.31
SNRPA1P09661 snoU13.17-201ENST00000458802 104 ntBASIC0.63□□□□□ -2.31
SNRPA1P09661 NAMPTP3-201ENST00000569273 224 ntBASIC0.63□□□□□ -2.31
SNRPA1P09661 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.63□□□□□ -2.31
SNRPA1P09661 RNU5F-1-201ENST00000362507 117 ntBASIC0.62□□□□□ -2.31
SNRPA1P09661 RNU6-161P-201ENST00000363051 106 ntBASIC0.62□□□□□ -2.31
SNRPA1P09661 RNU6-1108P-201ENST00000516308 104 ntBASIC0.62□□□□□ -2.31
SNRPA1P09661 MIR1245B-201ENST00000636115 69 ntBASIC0.62□□□□□ -2.31
SNRPA1P09661 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
SNRPA1P09661 RNU6-624P-201ENST00000363411 107 ntBASIC0.61□□□□□ -2.31
SNRPA1P09661 RNA5SP325-201ENST00000363756 130 ntBASIC0.61□□□□□ -2.31
SNRPA1P09661 Y_RNA.316-201ENST00000365118 111 ntBASIC0.61□□□□□ -2.31
SNRPA1P09661 RNU6-652P-201ENST00000365488 107 ntBASIC0.61□□□□□ -2.31
SNRPA1P09661 RNU6-787P-201ENST00000384032 107 ntBASIC0.61□□□□□ -2.31
SNRPA1P09661 U3.27-201ENST00000391237 200 ntBASIC0.61□□□□□ -2.31
SNRPA1P09661 AC114737.2-201ENST00000421583 173 ntBASIC0.61□□□□□ -2.31
SNRPA1P09661 AC018659.1-201ENST00000551083 169 ntBASIC0.61□□□□□ -2.31
SNRPA1P09661 MIR4460-201ENST00000577862 86 ntBASIC0.61□□□□□ -2.31
SNRPA1P09661 SNORA70.25-201ENST00000612741 95 ntBASIC0.61□□□□□ -2.31
SNRPA1P09661 SNORA24B-201ENST00000384176 131 ntBASIC0.6□□□□□ -2.31
SNRPA1P09661 MIR1273G-201ENST00000577677 100 ntBASIC0.6□□□□□ -2.31
SNRPA1P09661 MIR4666B-201ENST00000578142 81 ntBASIC0.6□□□□□ -2.31
SNRPA1P09661 MIR5087-201ENST00000635826 76 ntBASIC0.6□□□□□ -2.31
SNRPA1P09661 AC073869.9-201ENST00000641610 120 ntBASIC0.6□□□□□ -2.31
SNRPA1P09661 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
SNRPA1P09661 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
SNRPA1P09661 Y_RNA.313-201ENST00000365095 103 ntBASIC0.59□□□□□ -2.31
SNRPA1P09661 MIR216B-201ENST00000390186 82 ntBASIC0.59□□□□□ -2.31
SNRPA1P09661 AC006210.1-201ENST00000424882 111 ntBASIC0.59□□□□□ -2.31
SNRPA1P09661 MIR548O2-201ENST00000616090 70 ntBASIC0.59□□□□□ -2.31
SNRPA1P09661 RNU6-208P-201ENST00000362431 107 ntBASIC0.58□□□□□ -2.32
SNRPA1P09661 RNU6-478P-201ENST00000363904 110 ntBASIC0.58□□□□□ -2.32
SNRPA1P09661 Y_RNA.423-201ENST00000384057 113 ntBASIC0.58□□□□□ -2.32
SNRPA1P09661 RNU6V-201ENST00000384105 107 ntBASIC0.58□□□□□ -2.32
SNRPA1P09661 MT-TY-201ENST00000387409 66 ntBASIC0.58□□□□□ -2.32
SNRPA1P09661 RNU6-129P-201ENST00000391022 107 ntBASIC0.58□□□□□ -2.32
SNRPA1P09661 SNORD77.2-201ENST00000391045 68 ntBASIC0.58□□□□□ -2.32
SNRPA1P09661 AL157398.1-201ENST00000452981 186 ntBASIC0.58□□□□□ -2.32
SNRPA1P09661 RNU5B-6P-201ENST00000516765 68 ntBASIC0.58□□□□□ -2.32
SNRPA1P09661 RNU1-29P-201ENST00000606574 126 ntBASIC0.58□□□□□ -2.32
SNRPA1P09661 AC243829.6-201ENST00000612652 106 ntBASIC0.58□□□□□ -2.32
SNRPA1P09661 RNU6-1124P-201ENST00000384169 107 ntBASIC0.57□□□□□ -2.32
SNRPA1P09661 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
SNRPA1P09661 SNORD110-201ENST00000408189 75 ntBASIC0.57□□□□□ -2.32
SNRPA1P09661 RNU2-59P-201ENST00000410482 191 ntBASIC0.57□□□□□ -2.32
SNRPA1P09661 SNORA68.3-201ENST00000515906 83 ntBASIC0.57□□□□□ -2.32
SNRPA1P09661 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
SNRPA1P09661 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 189.4 ms