Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 RNU6-260P-201ENST00000384092 107 ntBASIC-2.33□□□□□ -2.78
TFF1P04155 Z83846.1-201ENST00000446798 265 ntBASIC-2.33□□□□□ -2.78
TFF1P04155 snoU13.17-201ENST00000458802 104 ntBASIC-2.33□□□□□ -2.78
TFF1P04155 Y_RNA.661-201ENST00000516003 99 ntBASIC-2.33□□□□□ -2.78
TFF1P04155 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.34□□□□□ -2.78
TFF1P04155 AC113618.1-201ENST00000416747 285 ntBASIC-2.34□□□□□ -2.78
TFF1P04155 RNU6-65P-201ENST00000516332 98 ntBASIC-2.34□□□□□ -2.78
TFF1P04155 AL137067.1-201ENST00000615933 120 ntBASIC-2.34□□□□□ -2.78
TFF1P04155 Y_RNA.279-201ENST00000364763 95 ntBASIC-2.35□□□□□ -2.79
TFF1P04155 SNORD50.2-201ENST00000365465 70 ntBASIC-2.35□□□□□ -2.79
TFF1P04155 SNORD19-201ENST00000391191 68 ntBASIC-2.35□□□□□ -2.79
TFF1P04155 AC018880.2-201ENST00000414265 201 ntBASIC-2.35□□□□□ -2.79
TFF1P04155 AP002795.1-201ENST00000534879 84 ntBASIC-2.35□□□□□ -2.79
TFF1P04155 MIR4536-1-201ENST00000583537 88 ntBASIC-2.35□□□□□ -2.79
TFF1P04155 MIR1255B1-201ENST00000636325 63 ntBASIC-2.35□□□□□ -2.79
TFF1P04155 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.36□□□□□ -2.79
TFF1P04155 RNU6-363P-201ENST00000362895 105 ntBASIC-2.36□□□□□ -2.79
TFF1P04155 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.36□□□□□ -2.79
TFF1P04155 Y_RNA.259-201ENST00000364619 101 ntBASIC-2.36□□□□□ -2.79
TFF1P04155 RNU6-818P-201ENST00000364837 108 ntBASIC-2.36□□□□□ -2.79
TFF1P04155 MTND1P29-201ENST00000448112 647 ntBASIC-2.36□□□□□ -2.79
TFF1P04155 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.36□□□□□ -2.79
TFF1P04155 AC006254.2-201ENST00000603259 279 ntBASIC-2.36□□□□□ -2.79
TFF1P04155 AL512310.12-203ENST00000640543 90 ntBASIC-2.36□□□□□ -2.79
TFF1P04155 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.37□□□□□ -2.79
TFF1P04155 MIR1277-201ENST00000408536 78 ntBASIC-2.37□□□□□ -2.79
TFF1P04155 MIR1252-201ENST00000408861 65 ntBASIC-2.37□□□□□ -2.79
TFF1P04155 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.38□□□□□ -2.79
TFF1P04155 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.38□□□□□ -2.79
TFF1P04155 MT-TI-201ENST00000387365 69 ntBASIC-2.38□□□□□ -2.79
TFF1P04155 MIR548U-201ENST00000390728 81 ntBASIC-2.38□□□□□ -2.79
TFF1P04155 RNU2-38P-201ENST00000410856 79 ntBASIC-2.38□□□□□ -2.79
TFF1P04155 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.38□□□□□ -2.79
TFF1P04155 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.38□□□□□ -2.79
TFF1P04155 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.39□□□□□ -2.79
TFF1P04155 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.39□□□□□ -2.79
TFF1P04155 MIR521-2-201ENST00000384818 87 ntBASIC-2.39□□□□□ -2.79
TFF1P04155 RNU6-415P-201ENST00000516252 97 ntBASIC-2.39□□□□□ -2.79
TFF1P04155 MIR3140-201ENST00000583685 90 ntBASIC-2.39□□□□□ -2.79
TFF1P04155 AC080013.6-201ENST00000606185 215 ntBASIC-2.39□□□□□ -2.79
TFF1P04155 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.4□□□□□ -2.79
TFF1P04155 Y_RNA.505-201ENST00000384489 102 ntBASIC-2.4□□□□□ -2.79
TFF1P04155 MIR519A2-201ENST00000384990 87 ntBASIC-2.4□□□□□ -2.79
TFF1P04155 RNU7-85P-201ENST00000458851 63 ntBASIC-2.4□□□□□ -2.79
TFF1P04155 RNU6-62P-201ENST00000516526 102 ntBASIC-2.4□□□□□ -2.79
TFF1P04155 RNU6-1271P-201ENST00000517049 105 ntBASIC-2.4□□□□□ -2.79
TFF1P04155 AL442128.1-201ENST00000615151 90 ntBASIC-2.4□□□□□ -2.79
TFF1P04155 Y_RNA.51-201ENST00000362725 102 ntBASIC-2.41□□□□□ -2.8
TFF1P04155 RNU6-132P-201ENST00000383863 107 ntBASIC-2.41□□□□□ -2.8
TFF1P04155 SNORA75.5-201ENST00000391291 81 ntBASIC-2.41□□□□□ -2.8
TFF1P04155 SNORA7.5-201ENST00000410672 110 ntBASIC-2.41□□□□□ -2.8
TFF1P04155 RNU6-651P-201ENST00000411040 105 ntBASIC-2.41□□□□□ -2.8
TFF1P04155 RNU6-1143P-201ENST00000516125 104 ntBASIC-2.41□□□□□ -2.8
TFF1P04155 RNY3P15-201ENST00000516297 97 ntBASIC-2.41□□□□□ -2.8
TFF1P04155 Y_RNA.717-201ENST00000517106 92 ntBASIC-2.41□□□□□ -2.8
TFF1P04155 RNU6-770P-201ENST00000363929 105 ntBASIC-2.42□□□□□ -2.8
TFF1P04155 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.42□□□□□ -2.8
TFF1P04155 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.42□□□□□ -2.8
TFF1P04155 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-2.42□□□□□ -2.8
TFF1P04155 MIR3064-201ENST00000581130 66 ntBASIC-2.42□□□□□ -2.8
TFF1P04155 U2.14-201ENST00000615943 113 ntBASIC-2.42□□□□□ -2.8
TFF1P04155 MTND4LP32-201ENST00000636111 270 ntBASIC-2.42□□□□□ -2.8
TFF1P04155 RNU6-230P-201ENST00000362457 104 ntBASIC-2.43□□□□□ -2.8
TFF1P04155 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.43□□□□□ -2.8
TFF1P04155 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.43□□□□□ -2.8
TFF1P04155 RNU6-275P-201ENST00000364910 107 ntBASIC-2.43□□□□□ -2.8
TFF1P04155 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.43□□□□□ -2.8
TFF1P04155 RNU6-768P-201ENST00000384683 107 ntBASIC-2.43□□□□□ -2.8
TFF1P04155 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.43□□□□□ -2.8
TFF1P04155 Y_RNA.590-201ENST00000410140 107 ntBASIC-2.43□□□□□ -2.8
TFF1P04155 AL021921.1-201ENST00000442774 93 ntBASIC-2.43□□□□□ -2.8
TFF1P04155 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.43□□□□□ -2.8
TFF1P04155 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.43□□□□□ -2.8
TFF1P04155 MIR3657-201ENST00000584818 117 ntBASIC-2.43□□□□□ -2.8
TFF1P04155 MIR23C-201ENST00000579846 100 ntBASIC-2.44□□□□□ -2.8
TFF1P04155 RNU6-382P-201ENST00000365181 106 ntBASIC-2.45□□□□□ -2.8
TFF1P04155 RNU6-823P-201ENST00000391042 103 ntBASIC-2.45□□□□□ -2.8
TFF1P04155 SNORA40.15-201ENST00000516884 107 ntBASIC-2.45□□□□□ -2.8
TFF1P04155 AC104996.3-201ENST00000590718 94 ntBASIC-2.45□□□□□ -2.8
TFF1P04155 AC025521.1-201ENST00000621624 286 ntBASIC-2.45□□□□□ -2.8
TFF1P04155 MIR6739-201ENST00000622461 75 ntBASIC-2.45□□□□□ -2.8
TFF1P04155 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.45□□□□□ -2.8
TFF1P04155 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.46□□□□□ -2.8
TFF1P04155 RNU6-246P-201ENST00000384702 107 ntBASIC-2.46□□□□□ -2.8
TFF1P04155 MIR759-201ENST00000390224 91 ntBASIC-2.46□□□□□ -2.8
TFF1P04155 RNU6-695P-201ENST00000391157 104 ntBASIC-2.46□□□□□ -2.8
TFF1P04155 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.46□□□□□ -2.8
TFF1P04155 MIR3646-201ENST00000578301 84 ntBASIC-2.46□□□□□ -2.8
TFF1P04155 U6.106-201ENST00000636360 105 ntBASIC-2.46□□□□□ -2.8
TFF1P04155 RNU6-309P-201ENST00000364573 106 ntBASIC-2.47□□□□□ -2.8
TFF1P04155 SNORD18B-201ENST00000365659 72 ntBASIC-2.47□□□□□ -2.8
TFF1P04155 RNU6-841P-201ENST00000383872 107 ntBASIC-2.47□□□□□ -2.8
TFF1P04155 SNORD116-2-201ENST00000384274 95 ntBASIC-2.47□□□□□ -2.8
TFF1P04155 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.47□□□□□ -2.8
TFF1P04155 ELOCP20-201ENST00000422460 345 ntBASIC-2.47□□□□□ -2.8
TFF1P04155 AC021753.1-201ENST00000635724 168 ntBASIC-2.47□□□□□ -2.8
TFF1P04155 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.48□□□□□ -2.81
TFF1P04155 RNU6-409P-201ENST00000384114 104 ntBASIC-2.48□□□□□ -2.81
TFF1P04155 SNORD116-1-201ENST00000384335 95 ntBASIC-2.48□□□□□ -2.81
TFF1P04155 MIR548D2-201ENST00000384955 97 ntBASIC-2.48□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 223.1 ms