Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.08□□□□□ -2.42
MT-ND1P03886 RNU7-188P-201ENST00000517063 64 ntBASIC-0.08□□□□□ -2.42
MT-ND1P03886 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.08□□□□□ -2.42
MT-ND1P03886 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.09□□□□□ -2.42
MT-ND1P03886 RNU7-61P-201ENST00000515897 61 ntBASIC-0.09□□□□□ -2.42
MT-ND1P03886 RNU6-719P-201ENST00000516671 104 ntBASIC-0.09□□□□□ -2.42
MT-ND1P03886 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.09□□□□□ -2.42
MT-ND1P03886 RN7SL793P-201ENST00000583259 296 ntBASIC-0.09□□□□□ -2.42
MT-ND1P03886 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.09□□□□□ -2.42
MT-ND1P03886 MIR6514-201ENST00000622549 70 ntBASIC-0.09□□□□□ -2.42
MT-ND1P03886 SNORD114-26-201ENST00000363543 72 ntBASIC-0.1□□□□□ -2.43
MT-ND1P03886 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.1□□□□□ -2.43
MT-ND1P03886 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.1□□□□□ -2.43
MT-ND1P03886 RNY4P18-201ENST00000391107 89 ntBASIC-0.1□□□□□ -2.43
MT-ND1P03886 RNU6-972P-201ENST00000391208 107 ntBASIC-0.1□□□□□ -2.43
MT-ND1P03886 RNU6-887P-201ENST00000410660 100 ntBASIC-0.1□□□□□ -2.43
MT-ND1P03886 RNU7-159P-201ENST00000459284 62 ntBASIC-0.1□□□□□ -2.43
MT-ND1P03886 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.1□□□□□ -2.43
MT-ND1P03886 MIR3064-201ENST00000581130 66 ntBASIC-0.1□□□□□ -2.43
MT-ND1P03886 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.11□□□□□ -2.43
MT-ND1P03886 RNU6-154P-201ENST00000384306 106 ntBASIC-0.11□□□□□ -2.43
MT-ND1P03886 MIR652-201ENST00000385278 98 ntBASIC-0.11□□□□□ -2.43
MT-ND1P03886 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
MT-ND1P03886 RNU6-519P-201ENST00000410590 108 ntBASIC-0.11□□□□□ -2.43
MT-ND1P03886 RNU6-175P-201ENST00000516896 107 ntBASIC-0.11□□□□□ -2.43
MT-ND1P03886 RNU6-789P-201ENST00000517105 102 ntBASIC-0.11□□□□□ -2.43
MT-ND1P03886 CR383656.4-201ENST00000546909 122 ntBASIC-0.11□□□□□ -2.43
MT-ND1P03886 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.11□□□□□ -2.43
MT-ND1P03886 RNU6-54P-201ENST00000365563 107 ntBASIC-0.12□□□□□ -2.43
MT-ND1P03886 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.12□□□□□ -2.43
MT-ND1P03886 RNA5SP292-201ENST00000390974 118 ntBASIC-0.12□□□□□ -2.43
MT-ND1P03886 SNORD90-201ENST00000391145 111 ntBASIC-0.12□□□□□ -2.43
MT-ND1P03886 RNU4-61P-201ENST00000411243 107 ntBASIC-0.12□□□□□ -2.43
MT-ND1P03886 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.12□□□□□ -2.43
MT-ND1P03886 AC026421.1-201ENST00000519101 163 ntBASIC-0.12□□□□□ -2.43
MT-ND1P03886 MIR3140-201ENST00000583685 90 ntBASIC-0.12□□□□□ -2.43
MT-ND1P03886 AC104996.3-201ENST00000590718 94 ntBASIC-0.12□□□□□ -2.43
MT-ND1P03886 RNU6-766P-201ENST00000362478 107 ntBASIC-0.13□□□□□ -2.43
MT-ND1P03886 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.13□□□□□ -2.43
MT-ND1P03886 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.13□□□□□ -2.43
MT-ND1P03886 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.13□□□□□ -2.43
MT-ND1P03886 MIR193B-201ENST00000384907 83 ntBASIC-0.13□□□□□ -2.43
MT-ND1P03886 U3.27-201ENST00000391237 200 ntBASIC-0.13□□□□□ -2.43
MT-ND1P03886 FGF7P7-201ENST00000514120 227 ntBASIC-0.13□□□□□ -2.43
MT-ND1P03886 RNU6-162P-201ENST00000516228 103 ntBASIC-0.13□□□□□ -2.43
MT-ND1P03886 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.13□□□□□ -2.43
MT-ND1P03886 MIR330-201ENST00000362196 94 ntBASIC-0.14□□□□□ -2.43
MT-ND1P03886 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.14□□□□□ -2.43
MT-ND1P03886 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.14□□□□□ -2.43
MT-ND1P03886 MIR216B-201ENST00000390186 82 ntBASIC-0.14□□□□□ -2.43
MT-ND1P03886 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.14□□□□□ -2.43
MT-ND1P03886 MIR450A1-201ENST00000362262 91 ntBASIC-0.15□□□□□ -2.43
MT-ND1P03886 RNU6-302P-201ENST00000365249 107 ntBASIC-0.15□□□□□ -2.43
MT-ND1P03886 RNU6-811P-201ENST00000384069 107 ntBASIC-0.15□□□□□ -2.43
MT-ND1P03886 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.15□□□□□ -2.43
MT-ND1P03886 RNA5SP63-201ENST00000391225 112 ntBASIC-0.15□□□□□ -2.43
MT-ND1P03886 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.15□□□□□ -2.43
MT-ND1P03886 SNORD42B-201ENST00000458893 67 ntBASIC-0.15□□□□□ -2.43
MT-ND1P03886 RNU6-762P-201ENST00000517107 102 ntBASIC-0.15□□□□□ -2.43
MT-ND1P03886 U7.3-201ENST00000616123 62 ntBASIC-0.15□□□□□ -2.43
MT-ND1P03886 SNORD114-29-201ENST00000364819 70 ntBASIC-0.16□□□□□ -2.44
MT-ND1P03886 RNY1P4-201ENST00000384595 115 ntBASIC-0.16□□□□□ -2.44
MT-ND1P03886 MIR548U-201ENST00000390728 81 ntBASIC-0.16□□□□□ -2.44
MT-ND1P03886 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.16□□□□□ -2.44
MT-ND1P03886 MIR6507-201ENST00000613630 70 ntBASIC-0.16□□□□□ -2.44
MT-ND1P03886 SNORA63.2-201ENST00000362603 126 ntBASIC-0.17□□□□□ -2.44
MT-ND1P03886 SNORD116-10-201ENST00000363791 102 ntBASIC-0.17□□□□□ -2.44
MT-ND1P03886 SNORA24B-201ENST00000384176 131 ntBASIC-0.17□□□□□ -2.44
MT-ND1P03886 SNORD20-201ENST00000384550 80 ntBASIC-0.17□□□□□ -2.44
MT-ND1P03886 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.17□□□□□ -2.44
MT-ND1P03886 MTATP8P2-201ENST00000435212 202 ntBASIC-0.17□□□□□ -2.44
MT-ND1P03886 SNORA18.5-201ENST00000516616 101 ntBASIC-0.17□□□□□ -2.44
MT-ND1P03886 MIR148A-201ENST00000362215 68 ntBASIC-0.18□□□□□ -2.44
MT-ND1P03886 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.18□□□□□ -2.44
MT-ND1P03886 RNU4-32P-201ENST00000363404 141 ntBASIC-0.18□□□□□ -2.44
MT-ND1P03886 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.18□□□□□ -2.44
MT-ND1P03886 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.18□□□□□ -2.44
MT-ND1P03886 AL031737.1-201ENST00000450125 223 ntBASIC-0.18□□□□□ -2.44
MT-ND1P03886 MIR1273G-201ENST00000577677 100 ntBASIC-0.18□□□□□ -2.44
MT-ND1P03886 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.18□□□□□ -2.44
MT-ND1P03886 MIR20A-201ENST00000362279 71 ntBASIC-0.19□□□□□ -2.44
MT-ND1P03886 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.19□□□□□ -2.44
MT-ND1P03886 RNU6-215P-201ENST00000365169 102 ntBASIC-0.19□□□□□ -2.44
MT-ND1P03886 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.19□□□□□ -2.44
MT-ND1P03886 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.19□□□□□ -2.44
MT-ND1P03886 MIR5190-201ENST00000581537 80 ntBASIC-0.19□□□□□ -2.44
MT-ND1P03886 U2.22-201ENST00000636441 106 ntBASIC-0.19□□□□□ -2.44
MT-ND1P03886 MIR655-201ENST00000362159 97 ntBASIC-0.2□□□□□ -2.44
MT-ND1P03886 SNORA63.4-201ENST00000362763 126 ntBASIC-0.2□□□□□ -2.44
MT-ND1P03886 RNU6-755P-201ENST00000364400 103 ntBASIC-0.2□□□□□ -2.44
MT-ND1P03886 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
MT-ND1P03886 MIR582-201ENST00000365731 98 ntBASIC-0.2□□□□□ -2.44
MT-ND1P03886 RNU6-46P-201ENST00000383860 107 ntBASIC-0.2□□□□□ -2.44
MT-ND1P03886 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.2□□□□□ -2.44
MT-ND1P03886 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.2□□□□□ -2.44
MT-ND1P03886 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.21□□□□□ -2.44
MT-ND1P03886 SNORA49-201ENST00000386157 136 ntBASIC-0.21□□□□□ -2.44
MT-ND1P03886 AC244250.2-201ENST00000418731 148 ntBASIC-0.21□□□□□ -2.44
MT-ND1P03886 AC244090.1-201ENST00000441884 93 ntBASIC-0.21□□□□□ -2.44
MT-ND1P03886 AC104692.1-201ENST00000472406 90 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms