Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 RNU6-816P-201ENST00000390914 107 ntBASIC-1.28□□□□□ -2.61
SOD1P00441 RNU6-460P-201ENST00000391158 108 ntBASIC-1.28□□□□□ -2.61
SOD1P00441 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.28□□□□□ -2.61
SOD1P00441 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.28□□□□□ -2.61
SOD1P00441 SNORA81.3-201ENST00000517283 198 ntBASIC-1.28□□□□□ -2.61
SOD1P00441 AC022559.1-201ENST00000520905 205 ntBASIC-1.28□□□□□ -2.61
SOD1P00441 MIR3681-201ENST00000580089 72 ntBASIC-1.28□□□□□ -2.61
SOD1P00441 MIR4464-201ENST00000580818 92 ntBASIC-1.28□□□□□ -2.61
SOD1P00441 MIR3128-201ENST00000581957 66 ntBASIC-1.28□□□□□ -2.61
SOD1P00441 AP001340.1-201ENST00000624405 217 ntBASIC-1.28□□□□□ -2.61
SOD1P00441 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.29□□□□□ -2.62
SOD1P00441 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.29□□□□□ -2.62
SOD1P00441 SNORD114-17-201ENST00000364699 75 ntBASIC-1.29□□□□□ -2.62
SOD1P00441 RNU4-11P-201ENST00000365287 132 ntBASIC-1.29□□□□□ -2.62
SOD1P00441 AP001328.1-201ENST00000528550 176 ntBASIC-1.29□□□□□ -2.62
SOD1P00441 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.29□□□□□ -2.62
SOD1P00441 RNU6-208P-201ENST00000362431 107 ntBASIC-1.3□□□□□ -2.62
SOD1P00441 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.3□□□□□ -2.62
SOD1P00441 RNU6-990P-201ENST00000364385 104 ntBASIC-1.3□□□□□ -2.62
SOD1P00441 RNU6-132P-201ENST00000383863 107 ntBASIC-1.3□□□□□ -2.62
SOD1P00441 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.3□□□□□ -2.62
SOD1P00441 snoU83B.1-201ENST00000517136 88 ntBASIC-1.3□□□□□ -2.62
SOD1P00441 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.31□□□□□ -2.62
SOD1P00441 RNU6-30P-201ENST00000384561 107 ntBASIC-1.31□□□□□ -2.62
SOD1P00441 MIR577-201ENST00000385196 96 ntBASIC-1.31□□□□□ -2.62
SOD1P00441 SNORD75.2-201ENST00000408784 58 ntBASIC-1.31□□□□□ -2.62
SOD1P00441 AL158147.1-201ENST00000443970 75 ntBASIC-1.31□□□□□ -2.62
SOD1P00441 AC021146.9-201ENST00000512503 156 ntBASIC-1.31□□□□□ -2.62
SOD1P00441 MIR3140-201ENST00000583685 90 ntBASIC-1.31□□□□□ -2.62
SOD1P00441 AC141273.2-201ENST00000618989 130 ntBASIC-1.31□□□□□ -2.62
SOD1P00441 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.32□□□□□ -2.62
SOD1P00441 MIR548U-201ENST00000390728 81 ntBASIC-1.32□□□□□ -2.62
SOD1P00441 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.32□□□□□ -2.62
SOD1P00441 AL513043.2-201ENST00000573941 143 ntBASIC-1.32□□□□□ -2.62
SOD1P00441 MIR3064-201ENST00000581130 66 ntBASIC-1.32□□□□□ -2.62
SOD1P00441 AL353803.5-201ENST00000599815 141 ntBASIC-1.32□□□□□ -2.62
SOD1P00441 U6.96-201ENST00000636425 70 ntBASIC-1.32□□□□□ -2.62
SOD1P00441 MIR548A1-201ENST00000385041 97 ntBASIC-1.33□□□□□ -2.62
SOD1P00441 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.33□□□□□ -2.62
SOD1P00441 RNU6-781P-201ENST00000516377 101 ntBASIC-1.33□□□□□ -2.62
SOD1P00441 AC068339.1-201ENST00000526965 141 ntBASIC-1.33□□□□□ -2.62
SOD1P00441 MIR4694-201ENST00000578534 80 ntBASIC-1.33□□□□□ -2.62
SOD1P00441 MIR4439-201ENST00000583746 80 ntBASIC-1.33□□□□□ -2.62
SOD1P00441 AC062037.2-201ENST00000610137 73 ntBASIC-1.33□□□□□ -2.62
SOD1P00441 AL445584.3-201ENST00000617173 78 ntBASIC-1.33□□□□□ -2.62
SOD1P00441 MIR409-201ENST00000362237 79 ntBASIC-1.34□□□□□ -2.62
SOD1P00441 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.34□□□□□ -2.62
SOD1P00441 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.34□□□□□ -2.62
SOD1P00441 SNORA20.1-201ENST00000364790 130 ntBASIC-1.34□□□□□ -2.62
SOD1P00441 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.34□□□□□ -2.62
SOD1P00441 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.34□□□□□ -2.62
SOD1P00441 AC090617.8-201ENST00000623339 167 ntBASIC-1.34□□□□□ -2.62
SOD1P00441 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.35□□□□□ -2.63
SOD1P00441 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.35□□□□□ -2.63
SOD1P00441 RNA5SP470-201ENST00000516463 106 ntBASIC-1.35□□□□□ -2.63
SOD1P00441 MIR378F-201ENST00000578143 78 ntBASIC-1.35□□□□□ -2.63
SOD1P00441 AC104996.3-201ENST00000590718 94 ntBASIC-1.35□□□□□ -2.63
SOD1P00441 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.35□□□□□ -2.63
SOD1P00441 MIR6888-201ENST00000621977 67 ntBASIC-1.35□□□□□ -2.63
SOD1P00441 RNU6-832P-201ENST00000363319 107 ntBASIC-1.36□□□□□ -2.63
SOD1P00441 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.36□□□□□ -2.63
SOD1P00441 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.36□□□□□ -2.63
SOD1P00441 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.36□□□□□ -2.63
SOD1P00441 MTCYBP9-201ENST00000431021 303 ntBASIC-1.36□□□□□ -2.63
SOD1P00441 MIR4306-201ENST00000583390 91 ntBASIC-1.36□□□□□ -2.63
SOD1P00441 AC008737.2-201ENST00000599446 118 ntBASIC-1.36□□□□□ -2.63
SOD1P00441 MIR606-201ENST00000384851 96 ntBASIC-1.37□□□□□ -2.63
SOD1P00441 RNU6-644P-201ENST00000391155 98 ntBASIC-1.37□□□□□ -2.63
SOD1P00441 SNORD4B-201ENST00000459083 72 ntBASIC-1.37□□□□□ -2.63
SOD1P00441 RNU6-62P-201ENST00000516526 102 ntBASIC-1.37□□□□□ -2.63
SOD1P00441 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.37□□□□□ -2.63
SOD1P00441 RNY3P2-201ENST00000362918 102 ntBASIC-1.38□□□□□ -2.63
SOD1P00441 RNU6-151P-201ENST00000364158 107 ntBASIC-1.38□□□□□ -2.63
SOD1P00441 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.38□□□□□ -2.63
SOD1P00441 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.38□□□□□ -2.63
SOD1P00441 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.38□□□□□ -2.63
SOD1P00441 MIR29B1-201ENST00000385015 81 ntBASIC-1.38□□□□□ -2.63
SOD1P00441 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.38□□□□□ -2.63
SOD1P00441 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.38□□□□□ -2.63
SOD1P00441 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.39□□□□□ -2.63
SOD1P00441 RNU6-260P-201ENST00000384092 107 ntBASIC-1.39□□□□□ -2.63
SOD1P00441 MIR568-201ENST00000385036 95 ntBASIC-1.39□□□□□ -2.63
SOD1P00441 MIR513C-201ENST00000401352 84 ntBASIC-1.39□□□□□ -2.63
SOD1P00441 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.39□□□□□ -2.63
SOD1P00441 MIR4679-2-201ENST00000578358 77 ntBASIC-1.39□□□□□ -2.63
SOD1P00441 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.39□□□□□ -2.63
SOD1P00441 AC006254.2-201ENST00000603259 279 ntBASIC-1.39□□□□□ -2.63
SOD1P00441 U7.2-201ENST00000607576 63 ntBASIC-1.39□□□□□ -2.63
SOD1P00441 AC025166.1-201ENST00000612411 163 ntBASIC-1.39□□□□□ -2.63
SOD1P00441 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.4□□□□□ -2.63
SOD1P00441 RNU6-867P-201ENST00000364956 107 ntBASIC-1.4□□□□□ -2.63
SOD1P00441 RNU6-738P-201ENST00000384531 106 ntBASIC-1.4□□□□□ -2.63
SOD1P00441 MIR1302-3-201ENST00000408128 138 ntBASIC-1.4□□□□□ -2.63
SOD1P00441 snoU13.17-201ENST00000458802 104 ntBASIC-1.4□□□□□ -2.63
SOD1P00441 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.4□□□□□ -2.63
SOD1P00441 RNU6-924P-201ENST00000362926 108 ntBASIC-1.41□□□□□ -2.64
SOD1P00441 RNU6-797P-201ENST00000363101 109 ntBASIC-1.41□□□□□ -2.64
SOD1P00441 SNORD58C-201ENST00000365223 64 ntBASIC-1.41□□□□□ -2.64
SOD1P00441 RNU6-24P-201ENST00000384440 107 ntBASIC-1.41□□□□□ -2.64
SOD1P00441 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 421.1 ms