Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MIR4636-201ENST00000582271 80 ntBASIC0.64□□□□□ -2.31
RAPGEF3O95398 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.64□□□□□ -2.31
RAPGEF3O95398 AC073869.9-201ENST00000641610 120 ntBASIC0.64□□□□□ -2.31
RAPGEF3O95398 Y_RNA.207-201ENST00000364142 106 ntBASIC0.63□□□□□ -2.31
RAPGEF3O95398 MIR2113-201ENST00000459007 91 ntBASIC0.63□□□□□ -2.31
RAPGEF3O95398 RNU6-848P-201ENST00000515948 107 ntBASIC0.63□□□□□ -2.31
RAPGEF3O95398 RNU6-617P-201ENST00000516147 107 ntBASIC0.63□□□□□ -2.31
RAPGEF3O95398 RNU6-473P-201ENST00000516164 107 ntBASIC0.63□□□□□ -2.31
RAPGEF3O95398 RNU6-1049P-201ENST00000516414 107 ntBASIC0.63□□□□□ -2.31
RAPGEF3O95398 AC026421.1-201ENST00000519101 163 ntBASIC0.63□□□□□ -2.31
RAPGEF3O95398 MIR216B-201ENST00000390186 82 ntBASIC0.62□□□□□ -2.31
RAPGEF3O95398 RNU6-935P-201ENST00000410371 100 ntBASIC0.62□□□□□ -2.31
RAPGEF3O95398 AL157398.1-201ENST00000452981 186 ntBASIC0.62□□□□□ -2.31
RAPGEF3O95398 RNU6-1057P-201ENST00000517162 102 ntBASIC0.62□□□□□ -2.31
RAPGEF3O95398 RNU6-269P-201ENST00000391077 97 ntBASIC0.61□□□□□ -2.31
RAPGEF3O95398 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
RAPGEF3O95398 RNU6-811P-201ENST00000384069 107 ntBASIC0.6□□□□□ -2.31
RAPGEF3O95398 SNORD116-22-201ENST00000384430 92 ntBASIC0.6□□□□□ -2.31
RAPGEF3O95398 MIR548AG2-201ENST00000581228 64 ntBASIC0.6□□□□□ -2.31
RAPGEF3O95398 SNORA50A-201ENST00000384225 134 ntBASIC0.59□□□□□ -2.31
RAPGEF3O95398 MIR519E-201ENST00000385075 84 ntBASIC0.59□□□□□ -2.31
RAPGEF3O95398 RNY4P30-201ENST00000410216 95 ntBASIC0.59□□□□□ -2.31
RAPGEF3O95398 AC069271.1-201ENST00000445577 156 ntBASIC0.58□□□□□ -2.32
RAPGEF3O95398 RNU6-844P-201ENST00000517175 102 ntBASIC0.58□□□□□ -2.32
RAPGEF3O95398 MIR3064-201ENST00000581130 66 ntBASIC0.58□□□□□ -2.32
RAPGEF3O95398 AC104996.3-201ENST00000590718 94 ntBASIC0.58□□□□□ -2.32
RAPGEF3O95398 MIRLET7F1-201ENST00000362202 87 ntBASIC0.57□□□□□ -2.32
RAPGEF3O95398 SNORD44.1-201ENST00000363202 61 ntBASIC0.57□□□□□ -2.32
RAPGEF3O95398 RNU6-1131P-201ENST00000364955 107 ntBASIC0.57□□□□□ -2.32
RAPGEF3O95398 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.57□□□□□ -2.32
RAPGEF3O95398 MIR5706-201ENST00000579841 80 ntBASIC0.57□□□□□ -2.32
RAPGEF3O95398 RNU6-132P-201ENST00000383863 107 ntBASIC0.56□□□□□ -2.32
RAPGEF3O95398 U3.27-201ENST00000391237 200 ntBASIC0.56□□□□□ -2.32
RAPGEF3O95398 MIR1236-201ENST00000408340 102 ntBASIC0.56□□□□□ -2.32
RAPGEF3O95398 SNORA68.3-201ENST00000515906 83 ntBASIC0.56□□□□□ -2.32
RAPGEF3O95398 MIR4668-201ENST00000582284 70 ntBASIC0.56□□□□□ -2.32
RAPGEF3O95398 AC090625.1-201ENST00000357130 210 ntBASIC0.55□□□□□ -2.32
RAPGEF3O95398 MIRLET7D-201ENST00000362263 87 ntBASIC0.55□□□□□ -2.32
RAPGEF3O95398 Y_RNA.491-201ENST00000384417 107 ntBASIC0.55□□□□□ -2.32
RAPGEF3O95398 RNY1P7-201ENST00000384743 110 ntBASIC0.55□□□□□ -2.32
RAPGEF3O95398 RNU1-141P-201ENST00000364623 158 ntBASIC0.54□□□□□ -2.32
RAPGEF3O95398 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
RAPGEF3O95398 AC093423.1-201ENST00000440817 142 ntBASIC0.54□□□□□ -2.32
RAPGEF3O95398 RNU6-633P-201ENST00000362612 103 ntBASIC0.53□□□□□ -2.32
RAPGEF3O95398 RNU4-32P-201ENST00000363404 141 ntBASIC0.53□□□□□ -2.32
RAPGEF3O95398 Y_RNA.369-201ENST00000365568 117 ntBASIC0.53□□□□□ -2.32
RAPGEF3O95398 SNORA2A-201ENST00000383885 135 ntBASIC0.53□□□□□ -2.32
RAPGEF3O95398 RNU6-49P-201ENST00000384256 107 ntBASIC0.53□□□□□ -2.32
RAPGEF3O95398 RNA5SP299-201ENST00000391203 116 ntBASIC0.53□□□□□ -2.32
RAPGEF3O95398 RNA5SP170-201ENST00000517150 101 ntBASIC0.53□□□□□ -2.32
RAPGEF3O95398 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.53□□□□□ -2.32
RAPGEF3O95398 MIR451A-201ENST00000385059 72 ntBASIC0.52□□□□□ -2.33
RAPGEF3O95398 Y_RNA.620-201ENST00000411009 88 ntBASIC0.52□□□□□ -2.33
RAPGEF3O95398 RNA5SP484-201ENST00000458857 111 ntBASIC0.52□□□□□ -2.33
RAPGEF3O95398 MIR5589-201ENST00000579442 60 ntBASIC0.52□□□□□ -2.33
RAPGEF3O95398 U7.6-201ENST00000610841 64 ntBASIC0.52□□□□□ -2.33
RAPGEF3O95398 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.52□□□□□ -2.33
RAPGEF3O95398 MIR519C-201ENST00000385053 87 ntBASIC0.51□□□□□ -2.33
RAPGEF3O95398 SNORA18.5-201ENST00000516616 101 ntBASIC0.51□□□□□ -2.33
RAPGEF3O95398 MIR4752-201ENST00000579672 72 ntBASIC0.51□□□□□ -2.33
RAPGEF3O95398 RNY4P3-201ENST00000365254 95 ntBASIC0.5□□□□□ -2.33
RAPGEF3O95398 Y_RNA.423-201ENST00000384057 113 ntBASIC0.5□□□□□ -2.33
RAPGEF3O95398 SNORD110-201ENST00000408189 75 ntBASIC0.5□□□□□ -2.33
RAPGEF3O95398 AC006210.1-201ENST00000424882 111 ntBASIC0.5□□□□□ -2.33
RAPGEF3O95398 MIR5582-201ENST00000579697 68 ntBASIC0.5□□□□□ -2.33
RAPGEF3O95398 RNU1-29P-201ENST00000606574 126 ntBASIC0.5□□□□□ -2.33
RAPGEF3O95398 AC069503.3-201ENST00000618674 145 ntBASIC0.5□□□□□ -2.33
RAPGEF3O95398 RNU6-219P-201ENST00000364728 107 ntBASIC0.49□□□□□ -2.33
RAPGEF3O95398 RNU6-1134P-201ENST00000365156 101 ntBASIC0.49□□□□□ -2.33
RAPGEF3O95398 RNA5SP292-201ENST00000390974 118 ntBASIC0.49□□□□□ -2.33
RAPGEF3O95398 NAMPTP3-201ENST00000569273 224 ntBASIC0.49□□□□□ -2.33
RAPGEF3O95398 MIR4460-201ENST00000577862 86 ntBASIC0.49□□□□□ -2.33
RAPGEF3O95398 MIR4802-201ENST00000581881 80 ntBASIC0.49□□□□□ -2.33
RAPGEF3O95398 MIR6755-201ENST00000619993 66 ntBASIC0.49□□□□□ -2.33
RAPGEF3O95398 RNU6-1298P-201ENST00000362456 101 ntBASIC0.48□□□□□ -2.33
RAPGEF3O95398 RNU6-675P-201ENST00000384236 104 ntBASIC0.48□□□□□ -2.33
RAPGEF3O95398 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.48□□□□□ -2.33
RAPGEF3O95398 RNU6-402P-201ENST00000410678 103 ntBASIC0.48□□□□□ -2.33
RAPGEF3O95398 MIR5190-201ENST00000581537 80 ntBASIC0.48□□□□□ -2.33
RAPGEF3O95398 MIR103A1-201ENST00000362165 78 ntBASIC0.47□□□□□ -2.33
RAPGEF3O95398 SNORA63.2-201ENST00000362603 126 ntBASIC0.47□□□□□ -2.33
RAPGEF3O95398 RNU6-1327P-201ENST00000365302 105 ntBASIC0.47□□□□□ -2.33
RAPGEF3O95398 MT-TY-201ENST00000387409 66 ntBASIC0.47□□□□□ -2.33
RAPGEF3O95398 SNORA70.25-201ENST00000612741 95 ntBASIC0.47□□□□□ -2.33
RAPGEF3O95398 SNORD115-37-201ENST00000363768 82 ntBASIC0.46□□□□□ -2.34
RAPGEF3O95398 RNU6-294P-201ENST00000364999 102 ntBASIC0.46□□□□□ -2.34
RAPGEF3O95398 MIR4796-201ENST00000580742 81 ntBASIC0.46□□□□□ -2.34
RAPGEF3O95398 MIR548O2-201ENST00000616090 70 ntBASIC0.45□□□□□ -2.34
RAPGEF3O95398 Y_RNA.17-201ENST00000362433 111 ntBASIC0.44□□□□□ -2.34
RAPGEF3O95398 RNU6-497P-201ENST00000365316 104 ntBASIC0.44□□□□□ -2.34
RAPGEF3O95398 RNU6-1051P-201ENST00000365471 102 ntBASIC0.44□□□□□ -2.34
RAPGEF3O95398 Y_RNA.558-201ENST00000384685 113 ntBASIC0.44□□□□□ -2.34
RAPGEF3O95398 MIR760-201ENST00000390220 80 ntBASIC0.44□□□□□ -2.34
RAPGEF3O95398 FGF7P7-201ENST00000514120 227 ntBASIC0.44□□□□□ -2.34
RAPGEF3O95398 SNORD115-27-201ENST00000364430 82 ntBASIC0.43□□□□□ -2.34
RAPGEF3O95398 RNA5SP128-201ENST00000365305 116 ntBASIC0.43□□□□□ -2.34
RAPGEF3O95398 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
RAPGEF3O95398 SNORA9.1-201ENST00000362412 131 ntBASIC0.42□□□□□ -2.34
RAPGEF3O95398 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.42□□□□□ -2.34
RAPGEF3O95398 YWHAEP2-201ENST00000580066 112 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 259 ms