Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 MIR3973-201ENST00000579824 107 ntBASIC1.15□□□□□ -2.23
SMARCA5O60264 AC103810.9-201ENST00000606688 112 ntBASIC1.15□□□□□ -2.23
SMARCA5O60264 AC244669.1-204ENST00000621564 178 ntBASIC1.15□□□□□ -2.23
SMARCA5O60264 Y_RNA.164-201ENST00000363709 102 ntBASIC1.14□□□□□ -2.23
SMARCA5O60264 SNORA8.1-201ENST00000384250 140 ntBASIC1.14□□□□□ -2.23
SMARCA5O60264 SNORD28-201ENST00000384706 75 ntBASIC1.14□□□□□ -2.23
SMARCA5O60264 MIR519E-201ENST00000385075 84 ntBASIC1.14□□□□□ -2.23
SMARCA5O60264 RNU6-1177P-201ENST00000391058 104 ntBASIC1.14□□□□□ -2.23
SMARCA5O60264 SNORD99-201ENST00000408612 74 ntBASIC1.14□□□□□ -2.23
SMARCA5O60264 Y_RNA.681-201ENST00000516445 113 ntBASIC1.14□□□□□ -2.23
SMARCA5O60264 RNA5SP102-201ENST00000516865 106 ntBASIC1.14□□□□□ -2.23
SMARCA5O60264 MIR4653-201ENST00000585107 83 ntBASIC1.14□□□□□ -2.23
SMARCA5O60264 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
SMARCA5O60264 SNORD18A-201ENST00000363753 72 ntBASIC1.13□□□□□ -2.23
SMARCA5O60264 RNU6-382P-201ENST00000365181 106 ntBASIC1.13□□□□□ -2.23
SMARCA5O60264 RNU6-1241P-201ENST00000384536 107 ntBASIC1.13□□□□□ -2.23
SMARCA5O60264 PSMC1P5-201ENST00000512850 177 ntBASIC1.13□□□□□ -2.23
SMARCA5O60264 RNU6-1057P-201ENST00000517162 102 ntBASIC1.13□□□□□ -2.23
SMARCA5O60264 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.13□□□□□ -2.23
SMARCA5O60264 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.13□□□□□ -2.23
SMARCA5O60264 SNORD115-31-201ENST00000365318 82 ntBASIC1.12□□□□□ -2.23
SMARCA5O60264 MIR573-201ENST00000384964 99 ntBASIC1.12□□□□□ -2.23
SMARCA5O60264 U3.27-201ENST00000391237 200 ntBASIC1.12□□□□□ -2.23
SMARCA5O60264 RNU6-587P-201ENST00000391282 106 ntBASIC1.12□□□□□ -2.23
SMARCA5O60264 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.12□□□□□ -2.23
SMARCA5O60264 RNU6-634P-201ENST00000459134 106 ntBASIC1.12□□□□□ -2.23
SMARCA5O60264 MIR3678-201ENST00000578455 94 ntBASIC1.12□□□□□ -2.23
SMARCA5O60264 MIR3612-201ENST00000579753 87 ntBASIC1.12□□□□□ -2.23
SMARCA5O60264 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
SMARCA5O60264 MIR373-201ENST00000362273 69 ntBASIC1.11□□□□□ -2.23
SMARCA5O60264 MIR617-201ENST00000385030 97 ntBASIC1.11□□□□□ -2.23
SMARCA5O60264 MIR4639-201ENST00000584938 69 ntBASIC1.11□□□□□ -2.23
SMARCA5O60264 AC067863.3-201ENST00000624172 122 ntBASIC1.11□□□□□ -2.23
SMARCA5O60264 MIR4773-1-201ENST00000637203 78 ntBASIC1.11□□□□□ -2.23
SMARCA5O60264 RNA5SP47-201ENST00000517230 109 ntBASIC1.1□□□□□ -2.23
SMARCA5O60264 AL078603.1-201ENST00000603824 313 ntBASIC1.1□□□□□ -2.23
SMARCA5O60264 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SMARCA5O60264 RNU4-45P-201ENST00000365469 141 ntBASIC1.09□□□□□ -2.23
SMARCA5O60264 RNU6-540P-201ENST00000384622 101 ntBASIC1.09□□□□□ -2.23
SMARCA5O60264 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
SMARCA5O60264 SNORD41.1-201ENST00000391000 69 ntBASIC1.09□□□□□ -2.23
SMARCA5O60264 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.09□□□□□ -2.23
SMARCA5O60264 NAMPTP3-201ENST00000569273 224 ntBASIC1.09□□□□□ -2.23
SMARCA5O60264 MIR3675-201ENST00000583661 73 ntBASIC1.09□□□□□ -2.23
SMARCA5O60264 RNU6-726P-201ENST00000364680 107 ntBASIC1.08□□□□□ -2.24
SMARCA5O60264 RNU6-54P-201ENST00000365563 107 ntBASIC1.08□□□□□ -2.24
SMARCA5O60264 MIR532-201ENST00000385025 91 ntBASIC1.08□□□□□ -2.24
SMARCA5O60264 RNU6-788P-201ENST00000390967 104 ntBASIC1.08□□□□□ -2.24
SMARCA5O60264 AC093423.1-201ENST00000440817 142 ntBASIC1.08□□□□□ -2.24
SMARCA5O60264 MIR548O2-201ENST00000616090 70 ntBASIC1.08□□□□□ -2.24
SMARCA5O60264 RNU6-681P-201ENST00000364012 104 ntBASIC1.07□□□□□ -2.24
SMARCA5O60264 RNU6-716P-201ENST00000365621 103 ntBASIC1.07□□□□□ -2.24
SMARCA5O60264 RNU6-469P-201ENST00000516253 101 ntBASIC1.07□□□□□ -2.24
SMARCA5O60264 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.07□□□□□ -2.24
SMARCA5O60264 RNU6-495P-201ENST00000362995 107 ntBASIC1.06□□□□□ -2.24
SMARCA5O60264 MIR154-201ENST00000385243 84 ntBASIC1.06□□□□□ -2.24
SMARCA5O60264 AC244098.3-201ENST00000424803 96 ntBASIC1.06□□□□□ -2.24
SMARCA5O60264 SNORD42B-201ENST00000458893 67 ntBASIC1.06□□□□□ -2.24
SMARCA5O60264 RNU6-135P-201ENST00000516769 101 ntBASIC1.06□□□□□ -2.24
SMARCA5O60264 AC011195.1-201ENST00000578177 177 ntBASIC1.06□□□□□ -2.24
SMARCA5O60264 RNU1-93P-201ENST00000364704 169 ntBASIC1.05□□□□□ -2.24
SMARCA5O60264 SNORD45A-201ENST00000384512 84 ntBASIC1.05□□□□□ -2.24
SMARCA5O60264 RNU6-871P-201ENST00000516122 100 ntBASIC1.05□□□□□ -2.24
SMARCA5O60264 RNU6-539P-201ENST00000516665 103 ntBASIC1.05□□□□□ -2.24
SMARCA5O60264 SNORD115-22-201ENST00000364456 82 ntBASIC1.04□□□□□ -2.24
SMARCA5O60264 RNU6V-201ENST00000384105 107 ntBASIC1.04□□□□□ -2.24
SMARCA5O60264 RNU6-269P-201ENST00000391077 97 ntBASIC1.04□□□□□ -2.24
SMARCA5O60264 SNORD75.2-201ENST00000408784 58 ntBASIC1.04□□□□□ -2.24
SMARCA5O60264 RNU6-274P-201ENST00000459566 107 ntBASIC1.04□□□□□ -2.24
SMARCA5O60264 MIR8070-201ENST00000616510 88 ntBASIC1.04□□□□□ -2.24
SMARCA5O60264 MIR18A-201ENST00000362310 71 ntBASIC1.03□□□□□ -2.24
SMARCA5O60264 SNORD45.1-201ENST00000363181 77 ntBASIC1.03□□□□□ -2.24
SMARCA5O60264 SNORA36.1-201ENST00000363424 132 ntBASIC1.03□□□□□ -2.24
SMARCA5O60264 MIR548L-201ENST00000408303 86 ntBASIC1.03□□□□□ -2.24
SMARCA5O60264 MIR1276-201ENST00000408707 83 ntBASIC1.03□□□□□ -2.24
SMARCA5O60264 Y_RNA.386-201ENST00000383913 105 ntBASIC1.02□□□□□ -2.25
SMARCA5O60264 RNU7-24P-201ENST00000458867 62 ntBASIC1.02□□□□□ -2.25
SMARCA5O60264 SCARNA16.5-201ENST00000517114 183 ntBASIC1.02□□□□□ -2.25
SMARCA5O60264 SNORD114-22-201ENST00000365423 72 ntBASIC1.01□□□□□ -2.25
SMARCA5O60264 MIR203A-201ENST00000384836 110 ntBASIC1.01□□□□□ -2.25
SMARCA5O60264 RNU6-604P-201ENST00000390917 100 ntBASIC1.01□□□□□ -2.25
SMARCA5O60264 RNA5SP247-201ENST00000411181 105 ntBASIC1.01□□□□□ -2.25
SMARCA5O60264 MIR6857-201ENST00000613267 93 ntBASIC1.01□□□□□ -2.25
SMARCA5O60264 MIR6828-201ENST00000636181 60 ntBASIC1.01□□□□□ -2.25
SMARCA5O60264 RNU6-1039P-201ENST00000383931 107 ntBASIC1□□□□□ -2.25
SMARCA5O60264 RNY1P8-201ENST00000383970 114 ntBASIC1□□□□□ -2.25
SMARCA5O60264 MIR520E-201ENST00000384867 87 ntBASIC1□□□□□ -2.25
SMARCA5O60264 MT-TY-201ENST00000387409 66 ntBASIC1□□□□□ -2.25
SMARCA5O60264 SNORD30.1-201ENST00000391309 70 ntBASIC1□□□□□ -2.25
SMARCA5O60264 AL691482.2-201ENST00000457453 84 ntBASIC1□□□□□ -2.25
SMARCA5O60264 RNA5SP484-201ENST00000458857 111 ntBASIC1□□□□□ -2.25
SMARCA5O60264 SNORA40.17-201ENST00000517256 115 ntBASIC1□□□□□ -2.25
SMARCA5O60264 SNORD114-2-201ENST00000363953 78 ntBASIC0.99□□□□□ -2.25
SMARCA5O60264 RNU1-141P-201ENST00000364623 158 ntBASIC0.99□□□□□ -2.25
SMARCA5O60264 RNU6-649P-201ENST00000384463 107 ntBASIC0.99□□□□□ -2.25
SMARCA5O60264 MIR216B-201ENST00000390186 82 ntBASIC0.99□□□□□ -2.25
SMARCA5O60264 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
SMARCA5O60264 RNU6-351P-201ENST00000516097 100 ntBASIC0.99□□□□□ -2.25
SMARCA5O60264 RNU6-590P-201ENST00000365039 107 ntBASIC0.98□□□□□ -2.25
SMARCA5O60264 MIR499A-201ENST00000384903 122 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 287.2 ms