Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.41□□□□□ -2.34
PRKNO60260 RNU6-633P-201ENST00000362612 103 ntBASIC0.41□□□□□ -2.34
PRKNO60260 Y_RNA.239-201ENST00000364444 113 ntBASIC0.41□□□□□ -2.34
PRKNO60260 RNU6-497P-201ENST00000365316 104 ntBASIC0.41□□□□□ -2.34
PRKNO60260 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
PRKNO60260 RNU6-935P-201ENST00000410371 100 ntBASIC0.41□□□□□ -2.34
PRKNO60260 RNU6-267P-201ENST00000516714 103 ntBASIC0.41□□□□□ -2.34
PRKNO60260 AL109933.3-201ENST00000619095 188 ntBASIC0.41□□□□□ -2.34
PRKNO60260 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.41□□□□□ -2.34
PRKNO60260 AL162376.1-201ENST00000624117 175 ntBASIC0.41□□□□□ -2.34
PRKNO60260 MIR330-201ENST00000362196 94 ntBASIC0.4□□□□□ -2.35
PRKNO60260 RNU6-509P-201ENST00000363519 107 ntBASIC0.4□□□□□ -2.35
PRKNO60260 Y_RNA.491-201ENST00000384417 107 ntBASIC0.4□□□□□ -2.35
PRKNO60260 MIR617-201ENST00000385030 97 ntBASIC0.4□□□□□ -2.35
PRKNO60260 MIR519E-201ENST00000385075 84 ntBASIC0.4□□□□□ -2.35
PRKNO60260 RNU6-269P-201ENST00000391077 97 ntBASIC0.4□□□□□ -2.35
PRKNO60260 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
PRKNO60260 AC069271.1-201ENST00000445577 156 ntBASIC0.4□□□□□ -2.35
PRKNO60260 MIR519C-201ENST00000385053 87 ntBASIC0.39□□□□□ -2.35
PRKNO60260 MIR1236-201ENST00000408340 102 ntBASIC0.39□□□□□ -2.35
PRKNO60260 RNU7-74P-201ENST00000459104 62 ntBASIC0.39□□□□□ -2.35
PRKNO60260 AC006254.2-201ENST00000603259 279 ntBASIC0.39□□□□□ -2.35
PRKNO60260 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.39□□□□□ -2.35
PRKNO60260 MIR451A-201ENST00000385059 72 ntBASIC0.38□□□□□ -2.35
PRKNO60260 MIR1197-201ENST00000408818 88 ntBASIC0.38□□□□□ -2.35
PRKNO60260 SNORA18.5-201ENST00000516616 101 ntBASIC0.38□□□□□ -2.35
PRKNO60260 RNU6-762P-201ENST00000517107 102 ntBASIC0.38□□□□□ -2.35
PRKNO60260 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.38□□□□□ -2.35
PRKNO60260 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
PRKNO60260 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
PRKNO60260 Y_RNA.73-201ENST00000362910 113 ntBASIC0.37□□□□□ -2.35
PRKNO60260 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.37□□□□□ -2.35
PRKNO60260 RNU7-153P-201ENST00000516455 62 ntBASIC0.37□□□□□ -2.35
PRKNO60260 RNU6-1057P-201ENST00000517162 102 ntBASIC0.37□□□□□ -2.35
PRKNO60260 MIR4752-201ENST00000579672 72 ntBASIC0.37□□□□□ -2.35
PRKNO60260 MIR4796-201ENST00000580742 81 ntBASIC0.37□□□□□ -2.35
PRKNO60260 MIR548BB-201ENST00000626714 66 ntBASIC0.37□□□□□ -2.35
PRKNO60260 MIR103A1-201ENST00000362165 78 ntBASIC0.36□□□□□ -2.35
PRKNO60260 RNA5SP257-201ENST00000363023 116 ntBASIC0.36□□□□□ -2.35
PRKNO60260 SNORD44.1-201ENST00000363202 61 ntBASIC0.36□□□□□ -2.35
PRKNO60260 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
PRKNO60260 SNORD90-201ENST00000391145 111 ntBASIC0.36□□□□□ -2.35
PRKNO60260 RNU2-59P-201ENST00000410482 191 ntBASIC0.36□□□□□ -2.35
PRKNO60260 AC093423.1-201ENST00000440817 142 ntBASIC0.36□□□□□ -2.35
PRKNO60260 RNA5SP484-201ENST00000458857 111 ntBASIC0.36□□□□□ -2.35
PRKNO60260 RNU1-29P-201ENST00000606574 126 ntBASIC0.36□□□□□ -2.35
PRKNO60260 AC073869.9-201ENST00000641610 120 ntBASIC0.36□□□□□ -2.35
PRKNO60260 MIR494-201ENST00000349529 81 ntBASIC0.35□□□□□ -2.35
PRKNO60260 AC090625.1-201ENST00000357130 210 ntBASIC0.35□□□□□ -2.35
PRKNO60260 RNY1P1-201ENST00000364372 112 ntBASIC0.35□□□□□ -2.35
PRKNO60260 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
PRKNO60260 Y_RNA.423-201ENST00000384057 113 ntBASIC0.35□□□□□ -2.35
PRKNO60260 MIR450A2-201ENST00000385022 100 ntBASIC0.35□□□□□ -2.35
PRKNO60260 Y_RNA.611-201ENST00000410682 108 ntBASIC0.35□□□□□ -2.35
PRKNO60260 AC062037.1-201ENST00000605302 128 ntBASIC0.35□□□□□ -2.35
PRKNO60260 SNORA70.25-201ENST00000612741 95 ntBASIC0.35□□□□□ -2.35
PRKNO60260 MIR4679-1-201ENST00000637619 75 ntBASIC0.35□□□□□ -2.35
PRKNO60260 SNORA63.2-201ENST00000362603 126 ntBASIC0.34□□□□□ -2.36
PRKNO60260 SNORD115-37-201ENST00000363768 82 ntBASIC0.34□□□□□ -2.36
PRKNO60260 SNORD73B-201ENST00000364394 72 ntBASIC0.34□□□□□ -2.36
PRKNO60260 RNU1-141P-201ENST00000364623 158 ntBASIC0.34□□□□□ -2.36
PRKNO60260 RNU6-1051P-201ENST00000365471 102 ntBASIC0.34□□□□□ -2.36
PRKNO60260 FGF7P7-201ENST00000514120 227 ntBASIC0.34□□□□□ -2.36
PRKNO60260 NAMPTP3-201ENST00000569273 224 ntBASIC0.34□□□□□ -2.36
PRKNO60260 MIR3140-201ENST00000583685 90 ntBASIC0.34□□□□□ -2.36
PRKNO60260 IGLL4P-201ENST00000614590 133 ntBASIC0.34□□□□□ -2.36
PRKNO60260 RNA5SP62-201ENST00000363457 110 ntBASIC0.33□□□□□ -2.36
PRKNO60260 MIR216B-201ENST00000390186 82 ntBASIC0.33□□□□□ -2.36
PRKNO60260 U3.27-201ENST00000391237 200 ntBASIC0.33□□□□□ -2.36
PRKNO60260 AC022137.1-201ENST00000483735 151 ntBASIC0.33□□□□□ -2.36
PRKNO60260 AC093729.1-201ENST00000513074 128 ntBASIC0.33□□□□□ -2.36
PRKNO60260 SNORA25.13-201ENST00000516395 103 ntBASIC0.33□□□□□ -2.36
PRKNO60260 MIR5588-201ENST00000581890 63 ntBASIC0.33□□□□□ -2.36
PRKNO60260 MIR6755-201ENST00000619993 66 ntBASIC0.33□□□□□ -2.36
PRKNO60260 AC006160.2-201ENST00000637708 154 ntBASIC0.33□□□□□ -2.36
PRKNO60260 RNU5F-1-201ENST00000362507 117 ntBASIC0.32□□□□□ -2.36
PRKNO60260 Y_RNA.68-201ENST00000362881 102 ntBASIC0.32□□□□□ -2.36
PRKNO60260 RNU6-979P-201ENST00000383896 107 ntBASIC0.32□□□□□ -2.36
PRKNO60260 SNORA24B-201ENST00000384176 131 ntBASIC0.32□□□□□ -2.36
PRKNO60260 MT-TY-201ENST00000387409 66 ntBASIC0.32□□□□□ -2.36
PRKNO60260 RNU6-1052P-201ENST00000411398 104 ntBASIC0.32□□□□□ -2.36
PRKNO60260 AC006210.1-201ENST00000424882 111 ntBASIC0.32□□□□□ -2.36
PRKNO60260 Y_RNA.681-201ENST00000516445 113 ntBASIC0.32□□□□□ -2.36
PRKNO60260 RNU6-719P-201ENST00000516671 104 ntBASIC0.32□□□□□ -2.36
PRKNO60260 AC140658.3-201ENST00000567603 271 ntBASIC0.32□□□□□ -2.36
PRKNO60260 MIR4460-201ENST00000577862 86 ntBASIC0.32□□□□□ -2.36
PRKNO60260 MIR4514-201ENST00000581410 57 ntBASIC0.32□□□□□ -2.36
PRKNO60260 MIR548O2-201ENST00000616090 70 ntBASIC0.32□□□□□ -2.36
PRKNO60260 RNY4P3-201ENST00000365254 95 ntBASIC0.31□□□□□ -2.36
PRKNO60260 SNORA50A-201ENST00000384225 134 ntBASIC0.31□□□□□ -2.36
PRKNO60260 RNU6-820P-201ENST00000384273 107 ntBASIC0.31□□□□□ -2.36
PRKNO60260 RNU6-863P-201ENST00000515989 104 ntBASIC0.31□□□□□ -2.36
PRKNO60260 SNORA62.5-201ENST00000516634 120 ntBASIC0.31□□□□□ -2.36
PRKNO60260 MIR5706-201ENST00000579841 80 ntBASIC0.31□□□□□ -2.36
PRKNO60260 AC069503.3-201ENST00000618674 145 ntBASIC0.31□□□□□ -2.36
PRKNO60260 Y_RNA.178-201ENST00000363832 102 ntBASIC0.3□□□□□ -2.36
PRKNO60260 Y_RNA.426-201ENST00000384068 113 ntBASIC0.3□□□□□ -2.36
PRKNO60260 SNORD110-201ENST00000408189 75 ntBASIC0.3□□□□□ -2.36
PRKNO60260 RNY4P29-201ENST00000410801 97 ntBASIC0.3□□□□□ -2.36
PRKNO60260 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 1135.8 ms