Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 MIR548AG2-201ENST00000581228 64 ntBASIC0.99□□□□□ -2.25
SHOXO15266 MIR3140-201ENST00000583685 90 ntBASIC0.99□□□□□ -2.25
SHOXO15266 MIR6828-201ENST00000636181 60 ntBASIC0.99□□□□□ -2.25
SHOXO15266 RNU6-681P-201ENST00000364012 104 ntBASIC0.98□□□□□ -2.25
SHOXO15266 MIR608-201ENST00000384820 100 ntBASIC0.98□□□□□ -2.25
SHOXO15266 MIR519E-201ENST00000385075 84 ntBASIC0.98□□□□□ -2.25
SHOXO15266 AC097510.1-201ENST00000510945 133 ntBASIC0.98□□□□□ -2.25
SHOXO15266 RNA5SP94-201ENST00000516917 108 ntBASIC0.98□□□□□ -2.25
SHOXO15266 MIR3660-201ENST00000584845 100 ntBASIC0.98□□□□□ -2.25
SHOXO15266 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SHOXO15266 Y_RNA.244-201ENST00000364484 109 ntBASIC0.97□□□□□ -2.25
SHOXO15266 Y_RNA.540-201ENST00000384638 111 ntBASIC0.97□□□□□ -2.25
SHOXO15266 YWHAEP2-201ENST00000580066 112 ntBASIC0.97□□□□□ -2.25
SHOXO15266 YWHAEP3-201ENST00000582767 121 ntBASIC0.97□□□□□ -2.25
SHOXO15266 MIR151B-201ENST00000584249 96 ntBASIC0.97□□□□□ -2.25
SHOXO15266 Y_RNA.12-201ENST00000362393 112 ntBASIC0.96□□□□□ -2.26
SHOXO15266 Y_RNA.205-201ENST00000364128 113 ntBASIC0.96□□□□□ -2.26
SHOXO15266 SNORA36.2-201ENST00000384004 127 ntBASIC0.96□□□□□ -2.26
SHOXO15266 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
SHOXO15266 RNU6-1177P-201ENST00000391058 104 ntBASIC0.96□□□□□ -2.26
SHOXO15266 RNU6-1052P-201ENST00000411398 104 ntBASIC0.96□□□□□ -2.26
SHOXO15266 RNU6-719P-201ENST00000516671 104 ntBASIC0.96□□□□□ -2.26
SHOXO15266 RNA5SP268-201ENST00000516828 124 ntBASIC0.96□□□□□ -2.26
SHOXO15266 RNU6-303P-201ENST00000517091 106 ntBASIC0.96□□□□□ -2.26
SHOXO15266 AC022709.1-201ENST00000615967 87 ntBASIC0.96□□□□□ -2.26
SHOXO15266 MIR4662A-201ENST00000637499 67 ntBASIC0.96□□□□□ -2.26
SHOXO15266 SNORA24B-201ENST00000384176 131 ntBASIC0.95□□□□□ -2.26
SHOXO15266 RPL39P28-201ENST00000465655 155 ntBASIC0.95□□□□□ -2.26
SHOXO15266 MIR4295-201ENST00000585286 85 ntBASIC0.95□□□□□ -2.26
SHOXO15266 SNORA8.2-201ENST00000384372 139 ntBASIC0.94□□□□□ -2.26
SHOXO15266 RNU6-110P-201ENST00000384508 104 ntBASIC0.94□□□□□ -2.26
SHOXO15266 MIR140-201ENST00000385282 100 ntBASIC0.94□□□□□ -2.26
SHOXO15266 snoU13.17-201ENST00000458802 104 ntBASIC0.94□□□□□ -2.26
SHOXO15266 AC073869.9-201ENST00000641610 120 ntBASIC0.94□□□□□ -2.26
SHOXO15266 U7.4-201ENST00000614961 63 ntBASIC0.93□□□□□ -2.26
SHOXO15266 MIR6788-201ENST00000618842 66 ntBASIC0.93□□□□□ -2.26
SHOXO15266 Y_RNA.374-201ENST00000365606 101 ntBASIC0.92□□□□□ -2.26
SHOXO15266 Y_RNA.606-201ENST00000410579 103 ntBASIC0.92□□□□□ -2.26
SHOXO15266 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.92□□□□□ -2.26
SHOXO15266 MIR4460-201ENST00000577862 86 ntBASIC0.92□□□□□ -2.26
SHOXO15266 AC211469.2-201ENST00000605461 205 ntBASIC0.92□□□□□ -2.26
SHOXO15266 MIR548O2-201ENST00000616090 70 ntBASIC0.92□□□□□ -2.26
SHOXO15266 Y_RNA.371-201ENST00000365591 113 ntBASIC0.91□□□□□ -2.26
SHOXO15266 RNU6-274P-201ENST00000459566 107 ntBASIC0.91□□□□□ -2.26
SHOXO15266 RPS29P1-201ENST00000465274 159 ntBASIC0.91□□□□□ -2.26
SHOXO15266 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
SHOXO15266 U6.81-201ENST00000612550 106 ntBASIC0.91□□□□□ -2.26
SHOXO15266 AL162376.1-201ENST00000624117 175 ntBASIC0.91□□□□□ -2.26
SHOXO15266 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
SHOXO15266 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
SHOXO15266 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
SHOXO15266 SNORA36.1-201ENST00000363424 132 ntBASIC0.9□□□□□ -2.27
SHOXO15266 RNU6-340P-201ENST00000364005 107 ntBASIC0.9□□□□□ -2.27
SHOXO15266 RNU6-269P-201ENST00000391077 97 ntBASIC0.9□□□□□ -2.27
SHOXO15266 AC087343.1-201ENST00000477341 475 ntBASIC0.9□□□□□ -2.27
SHOXO15266 AC145423.2-201ENST00000610631 239 ntBASIC0.9□□□□□ -2.27
SHOXO15266 PVT1_3.1-201ENST00000620853 95 ntBASIC0.9□□□□□ -2.27
SHOXO15266 AC092634.7-201ENST00000621022 103 ntBASIC0.9□□□□□ -2.27
SHOXO15266 MIR216A-201ENST00000385063 110 ntBASIC0.89□□□□□ -2.27
SHOXO15266 SNORD71-201ENST00000411292 86 ntBASIC0.89□□□□□ -2.27
SHOXO15266 AC093423.1-201ENST00000440817 142 ntBASIC0.89□□□□□ -2.27
SHOXO15266 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SHOXO15266 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SHOXO15266 RNU1-141P-201ENST00000364623 158 ntBASIC0.88□□□□□ -2.27
SHOXO15266 RNU6-1296P-201ENST00000383879 107 ntBASIC0.88□□□□□ -2.27
SHOXO15266 MIR520E-201ENST00000384867 87 ntBASIC0.88□□□□□ -2.27
SHOXO15266 RN7SL793P-201ENST00000583259 296 ntBASIC0.88□□□□□ -2.27
SHOXO15266 MIR7107-201ENST00000611489 80 ntBASIC0.88□□□□□ -2.27
SHOXO15266 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
SHOXO15266 MT-TY-201ENST00000387409 66 ntBASIC0.87□□□□□ -2.27
SHOXO15266 SNORD75.2-201ENST00000408784 58 ntBASIC0.87□□□□□ -2.27
SHOXO15266 MIR548J-201ENST00000408833 112 ntBASIC0.87□□□□□ -2.27
SHOXO15266 RNU6-752P-201ENST00000516376 102 ntBASIC0.87□□□□□ -2.27
SHOXO15266 RNU6-824P-201ENST00000363724 104 ntBASIC0.86□□□□□ -2.27
SHOXO15266 RNU6-776P-201ENST00000364403 104 ntBASIC0.86□□□□□ -2.27
SHOXO15266 RNU6-1022P-201ENST00000365049 104 ntBASIC0.86□□□□□ -2.27
SHOXO15266 AC074348.1-201ENST00000426503 132 ntBASIC0.86□□□□□ -2.27
SHOXO15266 RNU7-24P-201ENST00000458867 62 ntBASIC0.86□□□□□ -2.27
SHOXO15266 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
SHOXO15266 AL590095.2-201ENST00000604136 117 ntBASIC0.86□□□□□ -2.27
SHOXO15266 AC069503.3-201ENST00000618674 145 ntBASIC0.86□□□□□ -2.27
SHOXO15266 MIR4773-1-201ENST00000637203 78 ntBASIC0.86□□□□□ -2.27
SHOXO15266 RNA5SP517-201ENST00000364724 117 ntBASIC0.85□□□□□ -2.27
SHOXO15266 RNU6V-201ENST00000384105 107 ntBASIC0.85□□□□□ -2.27
SHOXO15266 SNORA40.8-201ENST00000411034 126 ntBASIC0.85□□□□□ -2.27
SHOXO15266 RNA5SP484-201ENST00000458857 111 ntBASIC0.85□□□□□ -2.27
SHOXO15266 Y_RNA.681-201ENST00000516445 113 ntBASIC0.85□□□□□ -2.27
SHOXO15266 MIR4484-201ENST00000582855 83 ntBASIC0.85□□□□□ -2.27
SHOXO15266 RNY1P8-201ENST00000383970 114 ntBASIC0.84□□□□□ -2.27
SHOXO15266 AC006210.1-201ENST00000424882 111 ntBASIC0.84□□□□□ -2.27
SHOXO15266 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.84□□□□□ -2.27
SHOXO15266 SNORD114-21-201ENST00000606412 72 ntBASIC0.84□□□□□ -2.27
SHOXO15266 Y_RNA.178-201ENST00000363832 102 ntBASIC0.83□□□□□ -2.28
SHOXO15266 RNU1-93P-201ENST00000364704 169 ntBASIC0.83□□□□□ -2.28
SHOXO15266 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
SHOXO15266 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.83□□□□□ -2.28
SHOXO15266 NAMPTP3-201ENST00000569273 224 ntBASIC0.83□□□□□ -2.28
SHOXO15266 MIR5000-201ENST00000577717 103 ntBASIC0.83□□□□□ -2.28
SHOXO15266 RNU6-495P-201ENST00000362995 107 ntBASIC0.82□□□□□ -2.28
SHOXO15266 SNORD114-27-201ENST00000363766 70 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 639.6 ms