Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-478P-201ENST00000363904 110 ntBASIC-3.45□□□□□ -2.96
CHD1O14646 RNU6-696P-201ENST00000390834 107 ntBASIC-3.45□□□□□ -2.96
CHD1O14646 MTATP6P29-201ENST00000415057 132 ntBASIC-3.45□□□□□ -2.96
CHD1O14646 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.45□□□□□ -2.96
CHD1O14646 MIR548AG1-201ENST00000579932 66 ntBASIC-3.45□□□□□ -2.96
CHD1O14646 RNU6-694P-201ENST00000364071 147 ntBASIC-3.46□□□□□ -2.96
CHD1O14646 RNU6-382P-201ENST00000365181 106 ntBASIC-3.46□□□□□ -2.96
CHD1O14646 RNU6-1042P-201ENST00000384204 107 ntBASIC-3.46□□□□□ -2.96
CHD1O14646 MIR548F5-201ENST00000408421 86 ntBASIC-3.46□□□□□ -2.96
CHD1O14646 Y_RNA.602-201ENST00000410535 92 ntBASIC-3.46□□□□□ -2.96
CHD1O14646 Y_RNA.639-201ENST00000458981 102 ntBASIC-3.46□□□□□ -2.96
CHD1O14646 Y_RNA.144-201ENST00000363521 113 ntBASIC-3.47□□□□□ -2.96
CHD1O14646 RNU7-6P-201ENST00000516845 62 ntBASIC-3.47□□□□□ -2.96
CHD1O14646 AC037487.3-201ENST00000606668 112 ntBASIC-3.47□□□□□ -2.96
CHD1O14646 MTND5P26-201ENST00000426018 1752 ntBASIC-3.47□□□□□ -2.97
CHD1O14646 RNU6-1051P-201ENST00000365471 102 ntBASIC-3.47□□□□□ -2.97
CHD1O14646 MIR548U-201ENST00000390728 81 ntBASIC-3.47□□□□□ -2.97
CHD1O14646 SNORD50.2-201ENST00000365465 70 ntBASIC-3.48□□□□□ -2.97
CHD1O14646 RNU6-132P-201ENST00000383863 107 ntBASIC-3.48□□□□□ -2.97
CHD1O14646 Y_RNA.527-201ENST00000384573 102 ntBASIC-3.48□□□□□ -2.97
CHD1O14646 MIR509-1-201ENST00000385265 94 ntBASIC-3.48□□□□□ -2.97
CHD1O14646 MIR509-2-201ENST00000390724 91 ntBASIC-3.48□□□□□ -2.97
CHD1O14646 SNORA40.14-201ENST00000516543 86 ntBASIC-3.49□□□□□ -2.97
CHD1O14646 Y_RNA.236-201ENST00000364427 111 ntBASIC-3.5□□□□□ -2.97
CHD1O14646 RNU6-1148P-201ENST00000410992 104 ntBASIC-3.5□□□□□ -2.97
CHD1O14646 MIR4744-201ENST00000581563 82 ntBASIC-3.5□□□□□ -2.97
CHD1O14646 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.5□□□□□ -2.97
CHD1O14646 RNU6-326P-201ENST00000365480 107 ntBASIC-3.5□□□□□ -2.97
CHD1O14646 Y_RNA.463-201ENST00000384271 102 ntBASIC-3.5□□□□□ -2.97
CHD1O14646 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-3.5□□□□□ -2.97
CHD1O14646 MTATP6P21-201ENST00000440681 189 ntBASIC-3.5□□□□□ -2.97
CHD1O14646 RNU6-976P-201ENST00000516086 111 ntBASIC-3.5□□□□□ -2.97
CHD1O14646 Y_RNA.51-201ENST00000362725 102 ntBASIC-3.51□□□□□ -2.97
CHD1O14646 SCARNA24.2-201ENST00000516968 130 ntBASIC-3.51□□□□□ -2.97
CHD1O14646 RNU6-1271P-201ENST00000517049 105 ntBASIC-3.51□□□□□ -2.97
CHD1O14646 Y_RNA.88-201ENST00000363029 99 ntBASIC-3.52□□□□□ -2.97
CHD1O14646 AC092794.1-201ENST00000612734 582 ntBASIC-3.52□□□□□ -2.97
CHD1O14646 MIR376A1-201ENST00000616574 68 ntBASIC-3.52□□□□□ -2.97
CHD1O14646 AL365265.1-201ENST00000621045 234 ntBASIC-3.52□□□□□ -2.97
CHD1O14646 U6.106-201ENST00000636360 105 ntBASIC-3.52□□□□□ -2.97
CHD1O14646 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.53□□□□□ -2.97
CHD1O14646 RNU6-259P-201ENST00000383999 107 ntBASIC-3.53□□□□□ -2.97
CHD1O14646 MIR759-201ENST00000390224 91 ntBASIC-3.53□□□□□ -2.97
CHD1O14646 RNU6-584P-201ENST00000410350 95 ntBASIC-3.53□□□□□ -2.97
CHD1O14646 RNU6-861P-201ENST00000516745 106 ntBASIC-3.53□□□□□ -2.97
CHD1O14646 SNORA20.3-201ENST00000516880 132 ntBASIC-3.53□□□□□ -2.97
CHD1O14646 RNU6-699P-201ENST00000517081 110 ntBASIC-3.53□□□□□ -2.97
CHD1O14646 AC009094.1-201ENST00000564443 426 ntBASIC-3.53□□□□□ -2.97
CHD1O14646 MIR520D-201ENST00000385002 87 ntBASIC-3.53□□□□□ -2.98
CHD1O14646 RNU6-651P-201ENST00000411040 105 ntBASIC-3.53□□□□□ -2.98
CHD1O14646 AL442128.1-201ENST00000615151 90 ntBASIC-3.53□□□□□ -2.98
CHD1O14646 AL137067.1-201ENST00000615933 120 ntBASIC-3.53□□□□□ -2.98
CHD1O14646 RNU6-1313P-201ENST00000362622 102 ntBASIC-3.54□□□□□ -2.98
CHD1O14646 RNU6-103P-201ENST00000363686 107 ntBASIC-3.54□□□□□ -2.98
CHD1O14646 SNORD18B-201ENST00000365659 72 ntBASIC-3.54□□□□□ -2.98
CHD1O14646 RNU6-824P-201ENST00000363724 104 ntBASIC-3.55□□□□□ -2.98
CHD1O14646 MIR620-201ENST00000385232 95 ntBASIC-3.55□□□□□ -2.98
CHD1O14646 RNU7-85P-201ENST00000458851 63 ntBASIC-3.55□□□□□ -2.98
CHD1O14646 RNU6-62P-201ENST00000516526 102 ntBASIC-3.55□□□□□ -2.98
CHD1O14646 MIR1255B1-201ENST00000636325 63 ntBASIC-3.55□□□□□ -2.98
CHD1O14646 MIR4773-1-201ENST00000637203 78 ntBASIC-3.55□□□□□ -2.98
CHD1O14646 RNU6-1188P-201ENST00000363795 107 ntBASIC-3.56□□□□□ -2.98
CHD1O14646 SNORD115-46-201ENST00000390982 71 ntBASIC-3.56□□□□□ -2.98
CHD1O14646 Y_RNA.646-201ENST00000410980 101 ntBASIC-3.56□□□□□ -2.98
CHD1O14646 RNU6-1046P-201ENST00000516538 107 ntBASIC-3.56□□□□□ -2.98
CHD1O14646 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-3.56□□□□□ -2.98
CHD1O14646 AC107308.1-201ENST00000615897 301 ntBASIC-3.56□□□□□ -2.98
CHD1O14646 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.57□□□□□ -2.98
CHD1O14646 Y_RNA.394-201ENST00000383942 103 ntBASIC-3.57□□□□□ -2.98
CHD1O14646 SNORA7.5-201ENST00000410672 110 ntBASIC-3.57□□□□□ -2.98
CHD1O14646 Y_RNA.64-201ENST00000362845 102 ntBASIC-3.58□□□□□ -2.98
CHD1O14646 RNU6-832P-201ENST00000363319 107 ntBASIC-3.58□□□□□ -2.98
CHD1O14646 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-3.58□□□□□ -2.98
CHD1O14646 RNY4P20-201ENST00000516678 93 ntBASIC-3.58□□□□□ -2.98
CHD1O14646 RNU6-363P-201ENST00000362895 105 ntBASIC-3.58□□□□□ -2.98
CHD1O14646 Y_RNA.402-201ENST00000383972 102 ntBASIC-3.58□□□□□ -2.98
CHD1O14646 RNU6-458P-201ENST00000384179 107 ntBASIC-3.58□□□□□ -2.98
CHD1O14646 U6.58-201ENST00000613107 107 ntBASIC-3.58□□□□□ -2.98
CHD1O14646 MIR4272-201ENST00000635924 64 ntBASIC-3.58□□□□□ -2.98
CHD1O14646 SNORA25.1-201ENST00000362326 128 ntBASIC-3.59□□□□□ -2.98
CHD1O14646 Y_RNA.445-201ENST00000384168 102 ntBASIC-3.59□□□□□ -2.98
CHD1O14646 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.59□□□□□ -2.98
CHD1O14646 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.59□□□□□ -2.98
CHD1O14646 AC093424.1-201ENST00000604999 338 ntBASIC-3.59□□□□□ -2.98
CHD1O14646 RNU6-818P-201ENST00000364837 108 ntBASIC-3.6□□□□□ -2.99
CHD1O14646 Y_RNA.541-201ENST00000384640 113 ntBASIC-3.6□□□□□ -2.99
CHD1O14646 RNU6-956P-201ENST00000458868 103 ntBASIC-3.6□□□□□ -2.99
CHD1O14646 RNU6-780P-201ENST00000391030 104 ntBASIC-3.61□□□□□ -2.99
CHD1O14646 RNU6-381P-201ENST00000391259 108 ntBASIC-3.61□□□□□ -2.99
CHD1O14646 RNU6-519P-201ENST00000410590 108 ntBASIC-3.61□□□□□ -2.99
CHD1O14646 RNU6-130P-201ENST00000411112 103 ntBASIC-3.61□□□□□ -2.99
CHD1O14646 AC013734.1-201ENST00000619329 111 ntBASIC-3.61□□□□□ -2.99
CHD1O14646 AL603755.1-201ENST00000619504 163 ntBASIC-3.61□□□□□ -2.99
CHD1O14646 AC025521.1-201ENST00000621624 286 ntBASIC-3.61□□□□□ -2.99
CHD1O14646 Y_RNA.41-201ENST00000362646 102 ntBASIC-3.61□□□□□ -2.99
CHD1O14646 AL118496.2-201ENST00000448300 230 ntBASIC-3.61□□□□□ -2.99
CHD1O14646 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-3.61□□□□□ -2.99
CHD1O14646 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-3.61□□□□□ -2.99
CHD1O14646 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.62□□□□□ -2.99
CHD1O14646 SNORD81.2-201ENST00000365153 76 ntBASIC-3.62□□□□□ -2.99
Retrieved 100 of 98,524 protein–RNA pairs in 274.4 ms