Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 MIR1263-201ENST00000408324 86 ntBASIC-1.29□□□□□ -2.62
UBFD1O14562 RNA5SP180-201ENST00000516181 101 ntBASIC-1.29□□□□□ -2.62
UBFD1O14562 AC022559.1-201ENST00000520905 205 ntBASIC-1.29□□□□□ -2.62
UBFD1O14562 AC025521.1-201ENST00000621624 286 ntBASIC-1.29□□□□□ -2.62
UBFD1O14562 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.3□□□□□ -2.62
UBFD1O14562 MIR3140-201ENST00000583685 90 ntBASIC-1.3□□□□□ -2.62
UBFD1O14562 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.3□□□□□ -2.62
UBFD1O14562 AC090617.8-201ENST00000623339 167 ntBASIC-1.3□□□□□ -2.62
UBFD1O14562 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.31□□□□□ -2.62
UBFD1O14562 MTCYBP6-201ENST00000441810 138 ntBASIC-1.31□□□□□ -2.62
UBFD1O14562 MIR4306-201ENST00000583390 91 ntBASIC-1.31□□□□□ -2.62
UBFD1O14562 MIR4536-1-201ENST00000583537 88 ntBASIC-1.31□□□□□ -2.62
UBFD1O14562 RNU6-208P-201ENST00000362431 107 ntBASIC-1.32□□□□□ -2.62
UBFD1O14562 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.32□□□□□ -2.62
UBFD1O14562 RNU6-495P-201ENST00000362995 107 ntBASIC-1.32□□□□□ -2.62
UBFD1O14562 MIR548F4-201ENST00000408515 105 ntBASIC-1.32□□□□□ -2.62
UBFD1O14562 RNU7-85P-201ENST00000458851 63 ntBASIC-1.32□□□□□ -2.62
UBFD1O14562 MIR4464-201ENST00000580818 92 ntBASIC-1.32□□□□□ -2.62
UBFD1O14562 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.33□□□□□ -2.62
UBFD1O14562 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.33□□□□□ -2.62
UBFD1O14562 RNU6-132P-201ENST00000383863 107 ntBASIC-1.33□□□□□ -2.62
UBFD1O14562 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.33□□□□□ -2.62
UBFD1O14562 RNU6-460P-201ENST00000391158 108 ntBASIC-1.33□□□□□ -2.62
UBFD1O14562 MIR1285-2-201ENST00000408311 88 ntBASIC-1.33□□□□□ -2.62
UBFD1O14562 RNU6-65P-201ENST00000516332 98 ntBASIC-1.33□□□□□ -2.62
UBFD1O14562 MIR4441-201ENST00000582623 100 ntBASIC-1.33□□□□□ -2.62
UBFD1O14562 MIR4801-201ENST00000582704 82 ntBASIC-1.33□□□□□ -2.62
UBFD1O14562 YWHAEP3-201ENST00000582767 121 ntBASIC-1.33□□□□□ -2.62
UBFD1O14562 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.33□□□□□ -2.62
UBFD1O14562 SNORD50.2-201ENST00000365465 70 ntBASIC-1.34□□□□□ -2.62
UBFD1O14562 RNU7-197P-201ENST00000458836 62 ntBASIC-1.34□□□□□ -2.62
UBFD1O14562 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.34□□□□□ -2.62
UBFD1O14562 AC130289.1-201ENST00000577321 73 ntBASIC-1.34□□□□□ -2.62
UBFD1O14562 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.35□□□□□ -2.63
UBFD1O14562 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.35□□□□□ -2.63
UBFD1O14562 SNORA62.4-201ENST00000365504 151 ntBASIC-1.35□□□□□ -2.63
UBFD1O14562 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.35□□□□□ -2.63
UBFD1O14562 snoU83B.1-201ENST00000517136 88 ntBASIC-1.35□□□□□ -2.63
UBFD1O14562 AC141273.2-201ENST00000618989 130 ntBASIC-1.35□□□□□ -2.63
UBFD1O14562 U6.96-201ENST00000636425 70 ntBASIC-1.35□□□□□ -2.63
UBFD1O14562 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.35□□□□□ -2.63
UBFD1O14562 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.36□□□□□ -2.63
UBFD1O14562 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.36□□□□□ -2.63
UBFD1O14562 RNU6-915P-201ENST00000364943 103 ntBASIC-1.36□□□□□ -2.63
UBFD1O14562 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.36□□□□□ -2.63
UBFD1O14562 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.36□□□□□ -2.63
UBFD1O14562 RNU6-816P-201ENST00000390914 107 ntBASIC-1.36□□□□□ -2.63
UBFD1O14562 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.36□□□□□ -2.63
UBFD1O14562 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.36□□□□□ -2.63
UBFD1O14562 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.36□□□□□ -2.63
UBFD1O14562 RNA5SP136-201ENST00000410906 107 ntBASIC-1.36□□□□□ -2.63
UBFD1O14562 AC021146.9-201ENST00000512503 156 ntBASIC-1.36□□□□□ -2.63
UBFD1O14562 RNU4-71P-201ENST00000516258 113 ntBASIC-1.36□□□□□ -2.63
UBFD1O14562 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.36□□□□□ -2.63
UBFD1O14562 SNORA63.2-201ENST00000362603 126 ntBASIC-1.37□□□□□ -2.63
UBFD1O14562 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.37□□□□□ -2.63
UBFD1O14562 RNU4-11P-201ENST00000365287 132 ntBASIC-1.37□□□□□ -2.63
UBFD1O14562 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.37□□□□□ -2.63
UBFD1O14562 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.37□□□□□ -2.63
UBFD1O14562 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.37□□□□□ -2.63
UBFD1O14562 RNU6-781P-201ENST00000516377 101 ntBASIC-1.37□□□□□ -2.63
UBFD1O14562 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.37□□□□□ -2.63
UBFD1O14562 RNU6-111P-201ENST00000517179 105 ntBASIC-1.37□□□□□ -2.63
UBFD1O14562 MIR3128-201ENST00000581957 66 ntBASIC-1.37□□□□□ -2.63
UBFD1O14562 AL353803.5-201ENST00000599815 141 ntBASIC-1.37□□□□□ -2.63
UBFD1O14562 MIR6888-201ENST00000621977 67 ntBASIC-1.37□□□□□ -2.63
UBFD1O14562 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.38□□□□□ -2.63
UBFD1O14562 SNORA24B-201ENST00000384176 131 ntBASIC-1.38□□□□□ -2.63
UBFD1O14562 RNU6-158P-201ENST00000517104 100 ntBASIC-1.38□□□□□ -2.63
UBFD1O14562 AL513043.2-201ENST00000573941 143 ntBASIC-1.38□□□□□ -2.63
UBFD1O14562 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.39□□□□□ -2.63
UBFD1O14562 AL445584.3-201ENST00000617173 78 ntBASIC-1.39□□□□□ -2.63
UBFD1O14562 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.39□□□□□ -2.63
UBFD1O14562 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.4□□□□□ -2.63
UBFD1O14562 MIR577-201ENST00000385196 96 ntBASIC-1.4□□□□□ -2.63
UBFD1O14562 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.4□□□□□ -2.63
UBFD1O14562 AC068339.1-201ENST00000526965 141 ntBASIC-1.4□□□□□ -2.63
UBFD1O14562 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.41□□□□□ -2.64
UBFD1O14562 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.41□□□□□ -2.64
UBFD1O14562 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.41□□□□□ -2.64
UBFD1O14562 MIR3064-201ENST00000581130 66 ntBASIC-1.41□□□□□ -2.64
UBFD1O14562 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.42□□□□□ -2.64
UBFD1O14562 SNORD90-201ENST00000391145 111 ntBASIC-1.42□□□□□ -2.64
UBFD1O14562 AL117187.1-201ENST00000555482 181 ntBASIC-1.42□□□□□ -2.64
UBFD1O14562 RNY4P27-201ENST00000363341 96 ntBASIC-1.43□□□□□ -2.64
UBFD1O14562 RNY4P6-201ENST00000363667 96 ntBASIC-1.43□□□□□ -2.64
UBFD1O14562 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.43□□□□□ -2.64
UBFD1O14562 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.43□□□□□ -2.64
UBFD1O14562 MIR548A1-201ENST00000385041 97 ntBASIC-1.43□□□□□ -2.64
UBFD1O14562 SNORD75.2-201ENST00000408784 58 ntBASIC-1.43□□□□□ -2.64
UBFD1O14562 RNU7-24P-201ENST00000458867 62 ntBASIC-1.43□□□□□ -2.64
UBFD1O14562 MIR3613-201ENST00000579844 87 ntBASIC-1.44□□□□□ -2.64
UBFD1O14562 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.45□□□□□ -2.64
UBFD1O14562 AL158147.1-201ENST00000443970 75 ntBASIC-1.45□□□□□ -2.64
UBFD1O14562 snoU13.17-201ENST00000458802 104 ntBASIC-1.45□□□□□ -2.64
UBFD1O14562 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.45□□□□□ -2.64
UBFD1O14562 RNA5SP147-201ENST00000516493 109 ntBASIC-1.45□□□□□ -2.64
UBFD1O14562 AC104996.3-201ENST00000590718 94 ntBASIC-1.45□□□□□ -2.64
UBFD1O14562 AC044792.1-201ENST00000593294 196 ntBASIC-1.45□□□□□ -2.64
UBFD1O14562 RNU6-151P-201ENST00000364158 107 ntBASIC-1.46□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 162 ms