Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RNU6-820P-201ENST00000384273 107 ntBASIC0.65□□□□□ -2.31
FOXN3O00409 RNU6-242P-201ENST00000384359 107 ntBASIC0.65□□□□□ -2.31
FOXN3O00409 MIR1302-4-201ENST00000408701 150 ntBASIC0.65□□□□□ -2.31
FOXN3O00409 AC018659.1-201ENST00000551083 169 ntBASIC0.65□□□□□ -2.31
FOXN3O00409 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
FOXN3O00409 RNU6-726P-201ENST00000364680 107 ntBASIC0.64□□□□□ -2.31
FOXN3O00409 RNU6-1276P-201ENST00000365372 104 ntBASIC0.64□□□□□ -2.31
FOXN3O00409 RNU6-935P-201ENST00000410371 100 ntBASIC0.64□□□□□ -2.31
FOXN3O00409 AC093729.1-201ENST00000513074 128 ntBASIC0.64□□□□□ -2.31
FOXN3O00409 SNORA25.13-201ENST00000516395 103 ntBASIC0.64□□□□□ -2.31
FOXN3O00409 RNA5SP268-201ENST00000516828 124 ntBASIC0.64□□□□□ -2.31
FOXN3O00409 MIR7107-201ENST00000611489 80 ntBASIC0.64□□□□□ -2.31
FOXN3O00409 MIR1245B-201ENST00000636115 69 ntBASIC0.64□□□□□ -2.31
FOXN3O00409 Y_RNA.437-201ENST00000384113 113 ntBASIC0.63□□□□□ -2.31
FOXN3O00409 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
FOXN3O00409 SNORA72.7-201ENST00000516349 94 ntBASIC0.63□□□□□ -2.31
FOXN3O00409 RNU6-1057P-201ENST00000517162 102 ntBASIC0.63□□□□□ -2.31
FOXN3O00409 MIR4752-201ENST00000579672 72 ntBASIC0.63□□□□□ -2.31
FOXN3O00409 MTRNR2L2-201ENST00000604882 87 ntBASIC0.63□□□□□ -2.31
FOXN3O00409 SNORD115-44-201ENST00000365391 82 ntBASIC0.62□□□□□ -2.31
FOXN3O00409 Y_RNA.426-201ENST00000384068 113 ntBASIC0.62□□□□□ -2.31
FOXN3O00409 SNORA8.2-201ENST00000384372 139 ntBASIC0.62□□□□□ -2.31
FOXN3O00409 MIR519E-201ENST00000385075 84 ntBASIC0.62□□□□□ -2.31
FOXN3O00409 MIR6513-201ENST00000621188 64 ntBASIC0.62□□□□□ -2.31
FOXN3O00409 MIR6828-201ENST00000636181 60 ntBASIC0.62□□□□□ -2.31
FOXN3O00409 RNU6-1051P-201ENST00000365471 102 ntBASIC0.61□□□□□ -2.31
FOXN3O00409 RNU6-1152P-201ENST00000384576 107 ntBASIC0.61□□□□□ -2.31
FOXN3O00409 RNU6-269P-201ENST00000391077 97 ntBASIC0.61□□□□□ -2.31
FOXN3O00409 SNORD71-201ENST00000411292 86 ntBASIC0.61□□□□□ -2.31
FOXN3O00409 AL450471.1-201ENST00000447509 127 ntBASIC0.61□□□□□ -2.31
FOXN3O00409 RNU6-1108P-201ENST00000516308 104 ntBASIC0.61□□□□□ -2.31
FOXN3O00409 RNU6-652P-201ENST00000365488 107 ntBASIC0.6□□□□□ -2.31
FOXN3O00409 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
FOXN3O00409 AC140658.3-201ENST00000567603 271 ntBASIC0.6□□□□□ -2.31
FOXN3O00409 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
FOXN3O00409 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.6□□□□□ -2.31
FOXN3O00409 RNU6-161P-201ENST00000363051 106 ntBASIC0.59□□□□□ -2.31
FOXN3O00409 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
FOXN3O00409 Y_RNA.313-201ENST00000365095 103 ntBASIC0.59□□□□□ -2.31
FOXN3O00409 RNU6-787P-201ENST00000384032 107 ntBASIC0.59□□□□□ -2.31
FOXN3O00409 SNORD41.1-201ENST00000391000 69 ntBASIC0.59□□□□□ -2.31
FOXN3O00409 snoU13.17-201ENST00000458802 104 ntBASIC0.59□□□□□ -2.31
FOXN3O00409 RNA5SP484-201ENST00000458857 111 ntBASIC0.59□□□□□ -2.31
FOXN3O00409 Y_RNA.316-201ENST00000365118 111 ntBASIC0.58□□□□□ -2.32
FOXN3O00409 RNU6-1124P-201ENST00000384169 107 ntBASIC0.58□□□□□ -2.32
FOXN3O00409 MIR617-201ENST00000385030 97 ntBASIC0.58□□□□□ -2.32
FOXN3O00409 MIR936-201ENST00000401264 98 ntBASIC0.58□□□□□ -2.32
FOXN3O00409 Y_RNA.607-201ENST00000410597 98 ntBASIC0.58□□□□□ -2.32
FOXN3O00409 SNORA40.8-201ENST00000411034 126 ntBASIC0.58□□□□□ -2.32
FOXN3O00409 AC069271.1-201ENST00000445577 156 ntBASIC0.58□□□□□ -2.32
FOXN3O00409 RNU7-171P-201ENST00000459581 62 ntBASIC0.58□□□□□ -2.32
FOXN3O00409 RNU6-228P-201ENST00000362700 106 ntBASIC0.57□□□□□ -2.32
FOXN3O00409 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
FOXN3O00409 NAMPTP3-201ENST00000569273 224 ntBASIC0.57□□□□□ -2.32
FOXN3O00409 RNU5F-1-201ENST00000362507 117 ntBASIC0.56□□□□□ -2.32
FOXN3O00409 SNORD118-201ENST00000363593 134 ntBASIC0.56□□□□□ -2.32
FOXN3O00409 RNU6-478P-201ENST00000363904 110 ntBASIC0.56□□□□□ -2.32
FOXN3O00409 RNA5SP225-201ENST00000410874 135 ntBASIC0.56□□□□□ -2.32
FOXN3O00409 SNORA68.3-201ENST00000515906 83 ntBASIC0.56□□□□□ -2.32
FOXN3O00409 SNORA70.25-201ENST00000612741 95 ntBASIC0.56□□□□□ -2.32
FOXN3O00409 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
FOXN3O00409 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.55□□□□□ -2.32
FOXN3O00409 SNORA63.2-201ENST00000362603 126 ntBASIC0.55□□□□□ -2.32
FOXN3O00409 MIR518A1-201ENST00000385068 85 ntBASIC0.55□□□□□ -2.32
FOXN3O00409 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
FOXN3O00409 RNU6-54P-201ENST00000365563 107 ntBASIC0.54□□□□□ -2.32
FOXN3O00409 Y_RNA.423-201ENST00000384057 113 ntBASIC0.54□□□□□ -2.32
FOXN3O00409 RNU6V-201ENST00000384105 107 ntBASIC0.54□□□□□ -2.32
FOXN3O00409 MIR193B-201ENST00000384907 83 ntBASIC0.54□□□□□ -2.32
FOXN3O00409 MIR1255A-201ENST00000408338 113 ntBASIC0.54□□□□□ -2.32
FOXN3O00409 RNA5SP193-201ENST00000410353 107 ntBASIC0.54□□□□□ -2.32
FOXN3O00409 RNU5B-6P-201ENST00000516765 68 ntBASIC0.54□□□□□ -2.32
FOXN3O00409 MIR4460-201ENST00000577862 86 ntBASIC0.54□□□□□ -2.32
FOXN3O00409 AL162376.1-201ENST00000624117 175 ntBASIC0.54□□□□□ -2.32
FOXN3O00409 RNU6-208P-201ENST00000362431 107 ntBASIC0.53□□□□□ -2.32
FOXN3O00409 RNU1-141P-201ENST00000364623 158 ntBASIC0.53□□□□□ -2.32
FOXN3O00409 RNY4P3-201ENST00000365254 95 ntBASIC0.53□□□□□ -2.32
FOXN3O00409 AC098934.3-201ENST00000430450 190 ntBASIC0.53□□□□□ -2.32
FOXN3O00409 RNU7-74P-201ENST00000459104 62 ntBASIC0.53□□□□□ -2.32
FOXN3O00409 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.53□□□□□ -2.32
FOXN3O00409 MIR4711-201ENST00000578274 70 ntBASIC0.53□□□□□ -2.32
FOXN3O00409 MIR4473-201ENST00000583731 91 ntBASIC0.53□□□□□ -2.32
FOXN3O00409 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
FOXN3O00409 Y_RNA.219-201ENST00000364232 113 ntBASIC0.52□□□□□ -2.33
FOXN3O00409 Y_RNA.258-201ENST00000364613 105 ntBASIC0.52□□□□□ -2.33
FOXN3O00409 Y_RNA.371-201ENST00000365591 113 ntBASIC0.52□□□□□ -2.33
FOXN3O00409 SNORA24B-201ENST00000384176 131 ntBASIC0.52□□□□□ -2.33
FOXN3O00409 SNORD78.1-201ENST00000390866 65 ntBASIC0.52□□□□□ -2.33
FOXN3O00409 RNU6-129P-201ENST00000391022 107 ntBASIC0.52□□□□□ -2.33
FOXN3O00409 SNORD77.2-201ENST00000391045 68 ntBASIC0.52□□□□□ -2.33
FOXN3O00409 AC006210.1-201ENST00000424882 111 ntBASIC0.52□□□□□ -2.33
FOXN3O00409 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.52□□□□□ -2.33
FOXN3O00409 MIR4666B-201ENST00000578142 81 ntBASIC0.52□□□□□ -2.33
FOXN3O00409 RNU6-624P-201ENST00000363411 107 ntBASIC0.51□□□□□ -2.33
FOXN3O00409 SNORD114-23-201ENST00000363536 72 ntBASIC0.51□□□□□ -2.33
FOXN3O00409 RNU6-824P-201ENST00000363724 104 ntBASIC0.51□□□□□ -2.33
FOXN3O00409 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
FOXN3O00409 AC093423.1-201ENST00000440817 142 ntBASIC0.51□□□□□ -2.33
FOXN3O00409 MIR1273G-201ENST00000577677 100 ntBASIC0.51□□□□□ -2.33
FOXN3O00409 MIR4484-201ENST00000582855 83 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 245.2 ms