Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 Y_RNA.491-201ENST00000384417 107 ntBASIC0.3□□□□□ -2.36
SRRM4A7MD48 MIR193B-201ENST00000384907 83 ntBASIC0.3□□□□□ -2.36
SRRM4A7MD48 MIR451A-201ENST00000385059 72 ntBASIC0.3□□□□□ -2.36
SRRM4A7MD48 Y_RNA.593-201ENST00000410292 98 ntBASIC0.3□□□□□ -2.36
SRRM4A7MD48 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
SRRM4A7MD48 RNA5SP484-201ENST00000458857 111 ntBASIC0.3□□□□□ -2.36
SRRM4A7MD48 RNU7-74P-201ENST00000459104 62 ntBASIC0.3□□□□□ -2.36
SRRM4A7MD48 RNU6-1057P-201ENST00000517162 102 ntBASIC0.3□□□□□ -2.36
SRRM4A7MD48 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.3□□□□□ -2.36
SRRM4A7MD48 AC010487.4-201ENST00000637027 61 ntBASIC0.3□□□□□ -2.36
SRRM4A7MD48 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
SRRM4A7MD48 RNU6-633P-201ENST00000362612 103 ntBASIC0.29□□□□□ -2.36
SRRM4A7MD48 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
SRRM4A7MD48 SNORA18.5-201ENST00000516616 101 ntBASIC0.29□□□□□ -2.36
SRRM4A7MD48 Y_RNA.43-201ENST00000362670 111 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 RNU6-1255P-201ENST00000363434 112 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 RNU6-509P-201ENST00000363519 107 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 RNA5SP325-201ENST00000363756 130 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 VTRNA1-3-201ENST00000365645 89 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 RNU6-675P-201ENST00000384236 104 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 MIR519C-201ENST00000385053 87 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 MIR1236-201ENST00000408340 102 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 RNU2-59P-201ENST00000410482 191 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 RNU7-153P-201ENST00000516455 62 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 NAMPTP3-201ENST00000569273 224 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 MIR1273G-201ENST00000577677 100 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 RNU1-29P-201ENST00000606574 126 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 AC243829.6-201ENST00000612652 106 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 SNORA70.25-201ENST00000612741 95 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 MIR6755-201ENST00000619993 66 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 AC073869.9-201ENST00000641610 120 ntBASIC0.28□□□□□ -2.36
SRRM4A7MD48 SNORD44.1-201ENST00000363202 61 ntBASIC0.27□□□□□ -2.37
SRRM4A7MD48 RNU1-141P-201ENST00000364623 158 ntBASIC0.27□□□□□ -2.37
SRRM4A7MD48 Y_RNA.423-201ENST00000384057 113 ntBASIC0.27□□□□□ -2.37
SRRM4A7MD48 Y_RNA.558-201ENST00000384685 113 ntBASIC0.27□□□□□ -2.37
SRRM4A7MD48 SNORD90-201ENST00000391145 111 ntBASIC0.27□□□□□ -2.37
SRRM4A7MD48 RNU6-1052P-201ENST00000411398 104 ntBASIC0.27□□□□□ -2.37
SRRM4A7MD48 AC093423.1-201ENST00000440817 142 ntBASIC0.27□□□□□ -2.37
SRRM4A7MD48 FGF7P7-201ENST00000514120 227 ntBASIC0.27□□□□□ -2.37
SRRM4A7MD48 RNU6-719P-201ENST00000516671 104 ntBASIC0.27□□□□□ -2.37
SRRM4A7MD48 MIR4796-201ENST00000580742 81 ntBASIC0.27□□□□□ -2.37
SRRM4A7MD48 RNU6-497P-201ENST00000365316 104 ntBASIC0.26□□□□□ -2.37
SRRM4A7MD48 RNU6-1051P-201ENST00000365471 102 ntBASIC0.26□□□□□ -2.37
SRRM4A7MD48 AC006210.1-201ENST00000424882 111 ntBASIC0.26□□□□□ -2.37
SRRM4A7MD48 MIR3140-201ENST00000583685 90 ntBASIC0.26□□□□□ -2.37
SRRM4A7MD48 MIR548BB-201ENST00000626714 66 ntBASIC0.26□□□□□ -2.37
SRRM4A7MD48 MIR494-201ENST00000349529 81 ntBASIC0.25□□□□□ -2.37
SRRM4A7MD48 SNORA63.2-201ENST00000362603 126 ntBASIC0.25□□□□□ -2.37
SRRM4A7MD48 Y_RNA.73-201ENST00000362910 113 ntBASIC0.25□□□□□ -2.37
SRRM4A7MD48 RNY1P1-201ENST00000364372 112 ntBASIC0.25□□□□□ -2.37
SRRM4A7MD48 SNORA2A-201ENST00000383885 135 ntBASIC0.25□□□□□ -2.37
SRRM4A7MD48 SNORD110-201ENST00000408189 75 ntBASIC0.25□□□□□ -2.37
SRRM4A7MD48 Y_RNA.611-201ENST00000410682 108 ntBASIC0.25□□□□□ -2.37
SRRM4A7MD48 RNU6-1232P-201ENST00000516299 86 ntBASIC0.25□□□□□ -2.37
SRRM4A7MD48 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.25□□□□□ -2.37
SRRM4A7MD48 MIR4460-201ENST00000577862 86 ntBASIC0.25□□□□□ -2.37
SRRM4A7MD48 SNORD115-37-201ENST00000363768 82 ntBASIC0.24□□□□□ -2.37
SRRM4A7MD48 MT-TY-201ENST00000387409 66 ntBASIC0.24□□□□□ -2.37
SRRM4A7MD48 MIR760-201ENST00000390220 80 ntBASIC0.24□□□□□ -2.37
SRRM4A7MD48 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
SRRM4A7MD48 U3.27-201ENST00000391237 200 ntBASIC0.24□□□□□ -2.37
SRRM4A7MD48 RNU6-848P-201ENST00000515948 107 ntBASIC0.24□□□□□ -2.37
SRRM4A7MD48 RNU6-617P-201ENST00000516147 107 ntBASIC0.24□□□□□ -2.37
SRRM4A7MD48 RNU6-473P-201ENST00000516164 107 ntBASIC0.24□□□□□ -2.37
SRRM4A7MD48 RNU6-1049P-201ENST00000516414 107 ntBASIC0.24□□□□□ -2.37
SRRM4A7MD48 RNU6-762P-201ENST00000517107 102 ntBASIC0.24□□□□□ -2.37
SRRM4A7MD48 MIR5706-201ENST00000579841 80 ntBASIC0.24□□□□□ -2.37
SRRM4A7MD48 AC006254.2-201ENST00000603259 279 ntBASIC0.24□□□□□ -2.37
SRRM4A7MD48 IGLL4P-201ENST00000614590 133 ntBASIC0.24□□□□□ -2.37
SRRM4A7MD48 MIR450A2-201ENST00000385022 100 ntBASIC0.23□□□□□ -2.37
SRRM4A7MD48 MIR216B-201ENST00000390186 82 ntBASIC0.23□□□□□ -2.37
SRRM4A7MD48 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.23□□□□□ -2.37
SRRM4A7MD48 RNU7-129P-201ENST00000516128 62 ntBASIC0.23□□□□□ -2.37
SRRM4A7MD48 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.23□□□□□ -2.37
SRRM4A7MD48 RNU5B-6P-201ENST00000516765 68 ntBASIC0.23□□□□□ -2.37
SRRM4A7MD48 YWHAEP2-201ENST00000580066 112 ntBASIC0.23□□□□□ -2.37
SRRM4A7MD48 MIR4473-201ENST00000583731 91 ntBASIC0.23□□□□□ -2.37
SRRM4A7MD48 MIR548O2-201ENST00000616090 70 ntBASIC0.23□□□□□ -2.37
SRRM4A7MD48 AC069503.3-201ENST00000618674 145 ntBASIC0.23□□□□□ -2.37
SRRM4A7MD48 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.23□□□□□ -2.37
SRRM4A7MD48 MIR924-201ENST00000638017 53 ntBASIC0.23□□□□□ -2.37
SRRM4A7MD48 MIR330-201ENST00000362196 94 ntBASIC0.22□□□□□ -2.37
SRRM4A7MD48 RNU5F-1-201ENST00000362507 117 ntBASIC0.22□□□□□ -2.37
SRRM4A7MD48 RNY4P3-201ENST00000365254 95 ntBASIC0.22□□□□□ -2.37
SRRM4A7MD48 RNU6V-201ENST00000384105 107 ntBASIC0.22□□□□□ -2.37
SRRM4A7MD48 SNORA24B-201ENST00000384176 131 ntBASIC0.22□□□□□ -2.37
SRRM4A7MD48 HMGN2P22-201ENST00000427588 175 ntBASIC0.22□□□□□ -2.37
SRRM4A7MD48 AC073261.1-201ENST00000429409 121 ntBASIC0.22□□□□□ -2.37
SRRM4A7MD48 AC093729.1-201ENST00000513074 128 ntBASIC0.22□□□□□ -2.37
SRRM4A7MD48 SNORA25.13-201ENST00000516395 103 ntBASIC0.22□□□□□ -2.37
SRRM4A7MD48 AC062037.1-201ENST00000605302 128 ntBASIC0.22□□□□□ -2.37
SRRM4A7MD48 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.21□□□□□ -2.38
SRRM4A7MD48 Y_RNA.115-201ENST00000363272 98 ntBASIC0.21□□□□□ -2.38
SRRM4A7MD48 RNA5SP62-201ENST00000363457 110 ntBASIC0.21□□□□□ -2.38
SRRM4A7MD48 SNORD73B-201ENST00000364394 72 ntBASIC0.21□□□□□ -2.38
SRRM4A7MD48 RNA5SP128-201ENST00000365305 116 ntBASIC0.21□□□□□ -2.38
SRRM4A7MD48 RNU6-54P-201ENST00000365563 107 ntBASIC0.21□□□□□ -2.38
SRRM4A7MD48 RNU6-815P-201ENST00000384080 113 ntBASIC0.21□□□□□ -2.38
SRRM4A7MD48 MIR501-201ENST00000390204 84 ntBASIC0.21□□□□□ -2.38
SRRM4A7MD48 AC022137.1-201ENST00000483735 151 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 271.7 ms