Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RNU2-51P-201ENST00000410708 197 ntBASIC-1.24□□□□□ -2.61
RBFOX3A6NFN3 MIR3171-201ENST00000584270 74 ntBASIC-1.24□□□□□ -2.61
RBFOX3A6NFN3 AL442128.1-201ENST00000615151 90 ntBASIC-1.24□□□□□ -2.61
RBFOX3A6NFN3 RNA5SP26-201ENST00000362406 119 ntBASIC-1.25□□□□□ -2.61
RBFOX3A6NFN3 SNORA63.2-201ENST00000362603 126 ntBASIC-1.25□□□□□ -2.61
RBFOX3A6NFN3 RNU6-409P-201ENST00000384114 104 ntBASIC-1.25□□□□□ -2.61
RBFOX3A6NFN3 SNORA24B-201ENST00000384176 131 ntBASIC-1.25□□□□□ -2.61
RBFOX3A6NFN3 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.25□□□□□ -2.61
RBFOX3A6NFN3 MIR548D2-201ENST00000384955 97 ntBASIC-1.25□□□□□ -2.61
RBFOX3A6NFN3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.25□□□□□ -2.61
RBFOX3A6NFN3 RNU4-61P-201ENST00000411243 107 ntBASIC-1.25□□□□□ -2.61
RBFOX3A6NFN3 RNU7-85P-201ENST00000458851 63 ntBASIC-1.25□□□□□ -2.61
RBFOX3A6NFN3 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.25□□□□□ -2.61
RBFOX3A6NFN3 MIR3658-201ENST00000636291 56 ntBASIC-1.25□□□□□ -2.61
RBFOX3A6NFN3 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.26□□□□□ -2.61
RBFOX3A6NFN3 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.26□□□□□ -2.61
RBFOX3A6NFN3 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.26□□□□□ -2.61
RBFOX3A6NFN3 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.26□□□□□ -2.61
RBFOX3A6NFN3 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.26□□□□□ -2.61
RBFOX3A6NFN3 SNORD50.2-201ENST00000365465 70 ntBASIC-1.26□□□□□ -2.61
RBFOX3A6NFN3 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.26□□□□□ -2.61
RBFOX3A6NFN3 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.26□□□□□ -2.61
RBFOX3A6NFN3 MIR548H3-201ENST00000408771 118 ntBASIC-1.26□□□□□ -2.61
RBFOX3A6NFN3 MIR1468-201ENST00000410600 86 ntBASIC-1.26□□□□□ -2.61
RBFOX3A6NFN3 MIR4520-1-201ENST00000582609 70 ntBASIC-1.26□□□□□ -2.61
RBFOX3A6NFN3 MIR6129-201ENST00000616087 109 ntBASIC-1.26□□□□□ -2.61
RBFOX3A6NFN3 AC091912.2-201ENST00000624798 167 ntBASIC-1.26□□□□□ -2.61
RBFOX3A6NFN3 RNU6-924P-201ENST00000362926 108 ntBASIC-1.27□□□□□ -2.61
RBFOX3A6NFN3 RNY3P14-201ENST00000384309 102 ntBASIC-1.27□□□□□ -2.61
RBFOX3A6NFN3 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.27□□□□□ -2.61
RBFOX3A6NFN3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.27□□□□□ -2.61
RBFOX3A6NFN3 MIR1255B2-201ENST00000408618 67 ntBASIC-1.27□□□□□ -2.61
RBFOX3A6NFN3 SNORD75.2-201ENST00000408784 58 ntBASIC-1.27□□□□□ -2.61
RBFOX3A6NFN3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.27□□□□□ -2.61
RBFOX3A6NFN3 AC020661.2-201ENST00000560114 134 ntBASIC-1.27□□□□□ -2.61
RBFOX3A6NFN3 MIR198-201ENST00000637333 62 ntBASIC-1.27□□□□□ -2.61
RBFOX3A6NFN3 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.28□□□□□ -2.61
RBFOX3A6NFN3 SNORD115-22-201ENST00000364456 82 ntBASIC-1.28□□□□□ -2.61
RBFOX3A6NFN3 SNORA33.1-201ENST00000364957 130 ntBASIC-1.28□□□□□ -2.61
RBFOX3A6NFN3 MIR548A1-201ENST00000385041 97 ntBASIC-1.28□□□□□ -2.61
RBFOX3A6NFN3 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.28□□□□□ -2.61
RBFOX3A6NFN3 snoU13.17-201ENST00000458802 104 ntBASIC-1.28□□□□□ -2.61
RBFOX3A6NFN3 RNU7-24P-201ENST00000458867 62 ntBASIC-1.28□□□□□ -2.61
RBFOX3A6NFN3 RNA5SP147-201ENST00000516493 109 ntBASIC-1.28□□□□□ -2.61
RBFOX3A6NFN3 RNU6-164P-201ENST00000364604 103 ntBASIC-1.29□□□□□ -2.62
RBFOX3A6NFN3 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.29□□□□□ -2.62
RBFOX3A6NFN3 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.29□□□□□ -2.62
RBFOX3A6NFN3 MIR601-201ENST00000385256 79 ntBASIC-1.29□□□□□ -2.62
RBFOX3A6NFN3 SNORD37.2-201ENST00000391075 66 ntBASIC-1.29□□□□□ -2.62
RBFOX3A6NFN3 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.3□□□□□ -2.62
RBFOX3A6NFN3 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.3□□□□□ -2.62
RBFOX3A6NFN3 RNU6-635P-201ENST00000516651 102 ntBASIC-1.3□□□□□ -2.62
RBFOX3A6NFN3 AL513043.2-201ENST00000573941 143 ntBASIC-1.3□□□□□ -2.62
RBFOX3A6NFN3 MIR3064-201ENST00000581130 66 ntBASIC-1.3□□□□□ -2.62
RBFOX3A6NFN3 MIR6874-201ENST00000635894 71 ntBASIC-1.3□□□□□ -2.62
RBFOX3A6NFN3 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.3□□□□□ -2.62
RBFOX3A6NFN3 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.31□□□□□ -2.62
RBFOX3A6NFN3 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.31□□□□□ -2.62
RBFOX3A6NFN3 RNU6-226P-201ENST00000363778 107 ntBASIC-1.31□□□□□ -2.62
RBFOX3A6NFN3 RNU6-382P-201ENST00000365181 106 ntBASIC-1.31□□□□□ -2.62
RBFOX3A6NFN3 SNORA33.2-201ENST00000365413 134 ntBASIC-1.31□□□□□ -2.62
RBFOX3A6NFN3 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.31□□□□□ -2.62
RBFOX3A6NFN3 RNU6-639P-201ENST00000384074 107 ntBASIC-1.31□□□□□ -2.62
RBFOX3A6NFN3 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.31□□□□□ -2.62
RBFOX3A6NFN3 SNORD90-201ENST00000391145 111 ntBASIC-1.31□□□□□ -2.62
RBFOX3A6NFN3 RNU6-918P-201ENST00000391219 106 ntBASIC-1.31□□□□□ -2.62
RBFOX3A6NFN3 MIR1263-201ENST00000408324 86 ntBASIC-1.31□□□□□ -2.62
RBFOX3A6NFN3 MTND2P23-201ENST00000422990 651 ntBASIC-1.31□□□□□ -2.62
RBFOX3A6NFN3 MIR3121-201ENST00000579680 77 ntBASIC-1.31□□□□□ -2.62
RBFOX3A6NFN3 RNU6-312P-201ENST00000364629 107 ntBASIC-1.32□□□□□ -2.62
RBFOX3A6NFN3 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.32□□□□□ -2.62
RBFOX3A6NFN3 RNU6-260P-201ENST00000384092 107 ntBASIC-1.32□□□□□ -2.62
RBFOX3A6NFN3 MIR203A-201ENST00000384836 110 ntBASIC-1.32□□□□□ -2.62
RBFOX3A6NFN3 SNORD58.1-201ENST00000391313 66 ntBASIC-1.32□□□□□ -2.62
RBFOX3A6NFN3 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.32□□□□□ -2.62
RBFOX3A6NFN3 CYP3A54P-201ENST00000566950 75 ntBASIC-1.32□□□□□ -2.62
RBFOX3A6NFN3 AC104996.3-201ENST00000590718 94 ntBASIC-1.32□□□□□ -2.62
RBFOX3A6NFN3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.32□□□□□ -2.62
RBFOX3A6NFN3 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.33□□□□□ -2.62
RBFOX3A6NFN3 SNORA2.1-201ENST00000363089 137 ntBASIC-1.33□□□□□ -2.62
RBFOX3A6NFN3 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.33□□□□□ -2.62
RBFOX3A6NFN3 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.33□□□□□ -2.62
RBFOX3A6NFN3 MIR507-201ENST00000385234 94 ntBASIC-1.33□□□□□ -2.62
RBFOX3A6NFN3 MIR548U-201ENST00000390728 81 ntBASIC-1.33□□□□□ -2.62
RBFOX3A6NFN3 RNA5SP86-201ENST00000390869 98 ntBASIC-1.33□□□□□ -2.62
RBFOX3A6NFN3 RNU6-816P-201ENST00000390914 107 ntBASIC-1.33□□□□□ -2.62
RBFOX3A6NFN3 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.33□□□□□ -2.62
RBFOX3A6NFN3 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.33□□□□□ -2.62
RBFOX3A6NFN3 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.34□□□□□ -2.62
RBFOX3A6NFN3 RNU6-238P-201ENST00000363313 106 ntBASIC-1.34□□□□□ -2.62
RBFOX3A6NFN3 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.34□□□□□ -2.62
RBFOX3A6NFN3 RNU6-239P-201ENST00000390990 99 ntBASIC-1.34□□□□□ -2.62
RBFOX3A6NFN3 RNU2-38P-201ENST00000410856 79 ntBASIC-1.34□□□□□ -2.62
RBFOX3A6NFN3 RNA5SP136-201ENST00000410906 107 ntBASIC-1.34□□□□□ -2.62
RBFOX3A6NFN3 AL353691.2-201ENST00000443795 59 ntBASIC-1.34□□□□□ -2.62
RBFOX3A6NFN3 RNU6-412P-201ENST00000516434 106 ntBASIC-1.34□□□□□ -2.62
RBFOX3A6NFN3 RNA5SP461-201ENST00000516451 104 ntBASIC-1.34□□□□□ -2.62
RBFOX3A6NFN3 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.34□□□□□ -2.62
RBFOX3A6NFN3 RNU6-151P-201ENST00000364158 107 ntBASIC-1.35□□□□□ -2.63
RBFOX3A6NFN3 MIR577-201ENST00000385196 96 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 201.5 ms