Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.57□□□□□ -2.82
HLA-DRB4X5D2U9 FGF7P7-201ENST00000514120 227 ntBASIC-2.57□□□□□ -2.82
HLA-DRB4X5D2U9 RNU7-30P-201ENST00000516835 62 ntBASIC-2.57□□□□□ -2.82
HLA-DRB4X5D2U9 MIR4748-201ENST00000578076 82 ntBASIC-2.57□□□□□ -2.82
HLA-DRB4X5D2U9 SNORD58B-201ENST00000607313 66 ntBASIC-2.57□□□□□ -2.82
HLA-DRB4X5D2U9 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.57□□□□□ -2.82
HLA-DRB4X5D2U9 RNU6-495P-201ENST00000362995 107 ntBASIC-2.58□□□□□ -2.82
HLA-DRB4X5D2U9 RNU6-774P-201ENST00000363238 107 ntBASIC-2.58□□□□□ -2.82
HLA-DRB4X5D2U9 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.58□□□□□ -2.82
HLA-DRB4X5D2U9 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.58□□□□□ -2.82
HLA-DRB4X5D2U9 RNU6-90P-201ENST00000606352 106 ntBASIC-2.58□□□□□ -2.82
HLA-DRB4X5D2U9 Y_RNA.496-201ENST00000384444 101 ntBASIC-2.59□□□□□ -2.82
HLA-DRB4X5D2U9 MIR548G-201ENST00000408442 89 ntBASIC-2.59□□□□□ -2.82
HLA-DRB4X5D2U9 AC113618.1-201ENST00000416747 285 ntBASIC-2.59□□□□□ -2.82
HLA-DRB4X5D2U9 AC025253.1-201ENST00000613623 543 ntBASIC-2.59□□□□□ -2.82
HLA-DRB4X5D2U9 RNU6-103P-201ENST00000363686 107 ntBASIC-2.6□□□□□ -2.83
HLA-DRB4X5D2U9 Y_RNA.183-201ENST00000363882 113 ntBASIC-2.6□□□□□ -2.83
HLA-DRB4X5D2U9 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.6□□□□□ -2.83
HLA-DRB4X5D2U9 AC104985.2-201ENST00000620598 500 ntBASIC-2.6□□□□□ -2.83
HLA-DRB4X5D2U9 RNU1-115P-201ENST00000365329 160 ntBASIC-2.61□□□□□ -2.83
HLA-DRB4X5D2U9 MIR1255B2-201ENST00000408618 67 ntBASIC-2.61□□□□□ -2.83
HLA-DRB4X5D2U9 Y_RNA.80-201ENST00000362996 102 ntBASIC-2.62□□□□□ -2.83
HLA-DRB4X5D2U9 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.62□□□□□ -2.83
HLA-DRB4X5D2U9 Y_RNA.485-201ENST00000384395 102 ntBASIC-2.62□□□□□ -2.83
HLA-DRB4X5D2U9 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.62□□□□□ -2.83
HLA-DRB4X5D2U9 RNU2-16P-201ENST00000410712 136 ntBASIC-2.62□□□□□ -2.83
HLA-DRB4X5D2U9 MTATP6P21-201ENST00000440681 189 ntBASIC-2.62□□□□□ -2.83
HLA-DRB4X5D2U9 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.62□□□□□ -2.83
HLA-DRB4X5D2U9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2.62□□□□□ -2.83
HLA-DRB4X5D2U9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.62□□□□□ -2.83
HLA-DRB4X5D2U9 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.63□□□□□ -2.83
HLA-DRB4X5D2U9 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.63□□□□□ -2.83
HLA-DRB4X5D2U9 SNORD116-6-201ENST00000384711 96 ntBASIC-2.63□□□□□ -2.83
HLA-DRB4X5D2U9 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-2.63□□□□□ -2.83
HLA-DRB4X5D2U9 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.63□□□□□ -2.83
HLA-DRB4X5D2U9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.63□□□□□ -2.83
HLA-DRB4X5D2U9 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.63□□□□□ -2.83
HLA-DRB4X5D2U9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.63□□□□□ -2.83
HLA-DRB4X5D2U9 Y_RNA.154-201ENST00000363624 102 ntBASIC-2.64□□□□□ -2.83
HLA-DRB4X5D2U9 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.64□□□□□ -2.83
HLA-DRB4X5D2U9 Y_RNA.31-201ENST00000362574 102 ntBASIC-2.65□□□□□ -2.83
HLA-DRB4X5D2U9 SNORD38.1-201ENST00000363863 68 ntBASIC-2.65□□□□□ -2.83
HLA-DRB4X5D2U9 RNU6-75P-201ENST00000515944 104 ntBASIC-2.65□□□□□ -2.83
HLA-DRB4X5D2U9 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.65□□□□□ -2.83
HLA-DRB4X5D2U9 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.66□□□□□ -2.84
HLA-DRB4X5D2U9 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.66□□□□□ -2.84
HLA-DRB4X5D2U9 Y_RNA.661-201ENST00000516003 99 ntBASIC-2.66□□□□□ -2.84
HLA-DRB4X5D2U9 RNY4P20-201ENST00000516678 93 ntBASIC-2.66□□□□□ -2.84
HLA-DRB4X5D2U9 RNU7-6P-201ENST00000516845 62 ntBASIC-2.66□□□□□ -2.84
HLA-DRB4X5D2U9 Y_RNA.554-201ENST00000384672 102 ntBASIC-2.67□□□□□ -2.84
HLA-DRB4X5D2U9 Z83846.1-201ENST00000446798 265 ntBASIC-2.67□□□□□ -2.84
HLA-DRB4X5D2U9 MIR4744-201ENST00000581563 82 ntBASIC-2.67□□□□□ -2.84
HLA-DRB4X5D2U9 RNU6-643P-201ENST00000384018 107 ntBASIC-2.68□□□□□ -2.84
HLA-DRB4X5D2U9 MIR548A1-201ENST00000385041 97 ntBASIC-2.68□□□□□ -2.84
HLA-DRB4X5D2U9 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.68□□□□□ -2.84
HLA-DRB4X5D2U9 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.68□□□□□ -2.84
HLA-DRB4X5D2U9 SNORD2.1-201ENST00000458762 69 ntBASIC-2.68□□□□□ -2.84
HLA-DRB4X5D2U9 RNU7-24P-201ENST00000458867 62 ntBASIC-2.68□□□□□ -2.84
HLA-DRB4X5D2U9 AL512310.12-203ENST00000640543 90 ntBASIC-2.68□□□□□ -2.84
HLA-DRB4X5D2U9 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.69□□□□□ -2.84
HLA-DRB4X5D2U9 SNORA63.2-201ENST00000362603 126 ntBASIC-2.69□□□□□ -2.84
HLA-DRB4X5D2U9 SNORA33.1-201ENST00000364957 130 ntBASIC-2.69□□□□□ -2.84
HLA-DRB4X5D2U9 RNU6-258P-201ENST00000390884 101 ntBASIC-2.69□□□□□ -2.84
HLA-DRB4X5D2U9 AL365265.1-201ENST00000621045 234 ntBASIC-2.69□□□□□ -2.84
HLA-DRB4X5D2U9 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.7□□□□□ -2.84
HLA-DRB4X5D2U9 Y_RNA.153-201ENST00000363615 91 ntBASIC-2.7□□□□□ -2.84
HLA-DRB4X5D2U9 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.7□□□□□ -2.84
HLA-DRB4X5D2U9 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.7□□□□□ -2.84
HLA-DRB4X5D2U9 SNORA63.7-201ENST00000365579 123 ntBASIC-2.7□□□□□ -2.84
HLA-DRB4X5D2U9 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.7□□□□□ -2.84
HLA-DRB4X5D2U9 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.7□□□□□ -2.84
HLA-DRB4X5D2U9 RNU6-65P-201ENST00000516332 98 ntBASIC-2.7□□□□□ -2.84
HLA-DRB4X5D2U9 AC090574.1-201ENST00000623186 233 ntBASIC-2.7□□□□□ -2.84
HLA-DRB4X5D2U9 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.71□□□□□ -2.84
HLA-DRB4X5D2U9 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.71□□□□□ -2.84
HLA-DRB4X5D2U9 Y_RNA.259-201ENST00000364619 101 ntBASIC-2.71□□□□□ -2.84
HLA-DRB4X5D2U9 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.71□□□□□ -2.84
HLA-DRB4X5D2U9 RNU6-121P-201ENST00000410525 99 ntBASIC-2.71□□□□□ -2.84
HLA-DRB4X5D2U9 CYP3A54P-201ENST00000566950 75 ntBASIC-2.71□□□□□ -2.84
HLA-DRB4X5D2U9 RNU6-578P-201ENST00000390980 103 ntBASIC-2.72□□□□□ -2.84
HLA-DRB4X5D2U9 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.72□□□□□ -2.84
HLA-DRB4X5D2U9 SNORA7.5-201ENST00000410672 110 ntBASIC-2.72□□□□□ -2.84
HLA-DRB4X5D2U9 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-2.72□□□□□ -2.84
HLA-DRB4X5D2U9 RNU7-154P-201ENST00000516194 62 ntBASIC-2.72□□□□□ -2.84
HLA-DRB4X5D2U9 RNY4-201ENST00000516507 96 ntBASIC-2.72□□□□□ -2.84
HLA-DRB4X5D2U9 MIR3688-2-201ENST00000636963 87 ntBASIC-2.72□□□□□ -2.84
HLA-DRB4X5D2U9 AC078883.4-201ENST00000623218 367 ntBASIC-2.73□□□□□ -2.85
HLA-DRB4X5D2U9 MIR1255B1-201ENST00000636325 63 ntBASIC-2.73□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.74□□□□□ -2.85
HLA-DRB4X5D2U9 RNU6-230P-201ENST00000362457 104 ntBASIC-2.74□□□□□ -2.85
HLA-DRB4X5D2U9 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.74□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.74□□□□□ -2.85
HLA-DRB4X5D2U9 RNU6-415P-201ENST00000516252 97 ntBASIC-2.74□□□□□ -2.85
HLA-DRB4X5D2U9 MIR4536-1-201ENST00000583537 88 ntBASIC-2.74□□□□□ -2.85
HLA-DRB4X5D2U9 AC113139.1-201ENST00000605049 239 ntBASIC-2.74□□□□□ -2.85
HLA-DRB4X5D2U9 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.75□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.630-201ENST00000411370 108 ntBASIC-2.75□□□□□ -2.85
HLA-DRB4X5D2U9 snoU13.17-201ENST00000458802 104 ntBASIC-2.75□□□□□ -2.85
HLA-DRB4X5D2U9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-2.75□□□□□ -2.85
HLA-DRB4X5D2U9 MIR548W-201ENST00000581970 74 ntBASIC-2.75□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms