Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 RNU6-409P-201ENST00000384114 104 ntBASIC-0.07□□□□□ -2.42
SHANK1Q9Y566 RNU6-804P-201ENST00000384286 107 ntBASIC-0.07□□□□□ -2.42
SHANK1Q9Y566 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.07□□□□□ -2.42
SHANK1Q9Y566 MIR599-201ENST00000385069 95 ntBASIC-0.07□□□□□ -2.42
SHANK1Q9Y566 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
SHANK1Q9Y566 RNA5SP300-201ENST00000391197 107 ntBASIC-0.07□□□□□ -2.42
SHANK1Q9Y566 AC069271.1-201ENST00000445577 156 ntBASIC-0.07□□□□□ -2.42
SHANK1Q9Y566 RNU7-195P-201ENST00000458793 62 ntBASIC-0.07□□□□□ -2.42
SHANK1Q9Y566 RNU6-521P-201ENST00000516663 105 ntBASIC-0.07□□□□□ -2.42
SHANK1Q9Y566 MIR4432-201ENST00000581823 84 ntBASIC-0.07□□□□□ -2.42
SHANK1Q9Y566 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.08□□□□□ -2.42
SHANK1Q9Y566 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.08□□□□□ -2.42
SHANK1Q9Y566 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.08□□□□□ -2.42
SHANK1Q9Y566 RNA5SP403-201ENST00000363598 108 ntBASIC-0.08□□□□□ -2.42
SHANK1Q9Y566 RNU1-141P-201ENST00000364623 158 ntBASIC-0.08□□□□□ -2.42
SHANK1Q9Y566 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.08□□□□□ -2.42
SHANK1Q9Y566 MIR593-201ENST00000384856 100 ntBASIC-0.08□□□□□ -2.42
SHANK1Q9Y566 MIR577-201ENST00000385196 96 ntBASIC-0.08□□□□□ -2.42
SHANK1Q9Y566 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.08□□□□□ -2.42
SHANK1Q9Y566 MIR20A-201ENST00000362279 71 ntBASIC-0.09□□□□□ -2.42
SHANK1Q9Y566 RNU6-664P-201ENST00000362381 107 ntBASIC-0.09□□□□□ -2.42
SHANK1Q9Y566 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.09□□□□□ -2.42
SHANK1Q9Y566 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.09□□□□□ -2.42
SHANK1Q9Y566 RNU6-127P-201ENST00000390897 107 ntBASIC-0.09□□□□□ -2.42
SHANK1Q9Y566 MIR548I1-201ENST00000408810 149 ntBASIC-0.09□□□□□ -2.42
SHANK1Q9Y566 RNU4-63P-201ENST00000411313 118 ntBASIC-0.09□□□□□ -2.42
SHANK1Q9Y566 U6.100-201ENST00000636230 99 ntBASIC-0.09□□□□□ -2.42
SHANK1Q9Y566 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.09□□□□□ -2.42
SHANK1Q9Y566 SNORD58C-201ENST00000365223 64 ntBASIC-0.09□□□□□ -2.42
SHANK1Q9Y566 MIR34C-201ENST00000384831 77 ntBASIC-0.09□□□□□ -2.42
SHANK1Q9Y566 MIR1263-201ENST00000408324 86 ntBASIC-0.09□□□□□ -2.42
SHANK1Q9Y566 NAMPTP3-201ENST00000569273 224 ntBASIC-0.09□□□□□ -2.42
SHANK1Q9Y566 uc_338.10-201ENST00000621872 182 ntBASIC-0.09□□□□□ -2.42
SHANK1Q9Y566 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.1□□□□□ -2.43
SHANK1Q9Y566 MIR106A-201ENST00000384870 81 ntBASIC-0.1□□□□□ -2.43
SHANK1Q9Y566 MT-TY-201ENST00000387409 66 ntBASIC-0.1□□□□□ -2.43
SHANK1Q9Y566 MIR3920-201ENST00000581751 86 ntBASIC-0.1□□□□□ -2.43
SHANK1Q9Y566 AC090425.1-201ENST00000610007 140 ntBASIC-0.1□□□□□ -2.43
SHANK1Q9Y566 MIR499B-201ENST00000636498 73 ntBASIC-0.1□□□□□ -2.43
SHANK1Q9Y566 MIR365A-201ENST00000362260 87 ntBASIC-0.11□□□□□ -2.43
SHANK1Q9Y566 SNORA18.1-201ENST00000363418 128 ntBASIC-0.11□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.11□□□□□ -2.43
SHANK1Q9Y566 SNORD4A-201ENST00000459174 72 ntBASIC-0.11□□□□□ -2.43
SHANK1Q9Y566 RNU6-180P-201ENST00000516697 61 ntBASIC-0.11□□□□□ -2.43
SHANK1Q9Y566 SNORD114-14-201ENST00000362723 75 ntBASIC-0.11□□□□□ -2.43
SHANK1Q9Y566 SNORD50.2-201ENST00000365465 70 ntBASIC-0.11□□□□□ -2.43
SHANK1Q9Y566 RNU6-816P-201ENST00000390914 107 ntBASIC-0.11□□□□□ -2.43
SHANK1Q9Y566 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.11□□□□□ -2.43
SHANK1Q9Y566 RNU6-466P-201ENST00000391224 103 ntBASIC-0.11□□□□□ -2.43
SHANK1Q9Y566 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.11□□□□□ -2.43
SHANK1Q9Y566 SNORD33.1-201ENST00000516213 88 ntBASIC-0.11□□□□□ -2.43
SHANK1Q9Y566 MIR4536-1-201ENST00000583537 88 ntBASIC-0.11□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.12□□□□□ -2.43
SHANK1Q9Y566 RNU6-652P-201ENST00000365488 107 ntBASIC-0.12□□□□□ -2.43
SHANK1Q9Y566 AL513043.2-201ENST00000573941 143 ntBASIC-0.12□□□□□ -2.43
SHANK1Q9Y566 RNY3P2-201ENST00000362918 102 ntBASIC-0.12□□□□□ -2.43
SHANK1Q9Y566 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.12□□□□□ -2.43
SHANK1Q9Y566 RNU4-36P-201ENST00000364294 144 ntBASIC-0.12□□□□□ -2.43
SHANK1Q9Y566 RNU6-480P-201ENST00000384332 107 ntBASIC-0.12□□□□□ -2.43
SHANK1Q9Y566 MIR181B2-201ENST00000385004 89 ntBASIC-0.12□□□□□ -2.43
SHANK1Q9Y566 RNA5SP272-201ENST00000516095 111 ntBASIC-0.12□□□□□ -2.43
SHANK1Q9Y566 MIR5009-201ENST00000578736 100 ntBASIC-0.12□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 RNY1P5-201ENST00000383890 115 ntBASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 MIR519E-201ENST00000385075 84 ntBASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 MIR569-201ENST00000385228 96 ntBASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 AC006210.1-201ENST00000424882 111 ntBASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 AC109327.2-201ENST00000448339 378 ntBASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 MIR3666-201ENST00000607845 111 ntBASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 RNU4-32P-201ENST00000363404 141 ntBASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 SNORD114-4-201ENST00000363962 75 ntBASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 MT-TQ-201ENST00000387372 72 ntBASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 RNU6-935P-201ENST00000410371 100 ntBASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.13□□□□□ -2.43
SHANK1Q9Y566 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.14□□□□□ -2.43
SHANK1Q9Y566 SNORD45B-201ENST00000364617 72 ntBASIC-0.14□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.14□□□□□ -2.43
SHANK1Q9Y566 RNU6-815P-201ENST00000384080 113 ntBASIC-0.14□□□□□ -2.43
SHANK1Q9Y566 SNORA51.5-201ENST00000384126 131 ntBASIC-0.14□□□□□ -2.43
SHANK1Q9Y566 MIR876-201ENST00000401147 81 ntBASIC-0.14□□□□□ -2.43
SHANK1Q9Y566 MIR548G-201ENST00000408442 89 ntBASIC-0.14□□□□□ -2.43
SHANK1Q9Y566 RNU6-257P-201ENST00000410238 98 ntBASIC-0.14□□□□□ -2.43
SHANK1Q9Y566 RNA5SP163-201ENST00000410304 99 ntBASIC-0.14□□□□□ -2.43
SHANK1Q9Y566 AC093423.1-201ENST00000440817 142 ntBASIC-0.14□□□□□ -2.43
SHANK1Q9Y566 RNU7-107P-201ENST00000459121 61 ntBASIC-0.14□□□□□ -2.43
SHANK1Q9Y566 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.14□□□□□ -2.43
SHANK1Q9Y566 U6.95-201ENST00000636931 70 ntBASIC-0.14□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.15□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.15□□□□□ -2.43
SHANK1Q9Y566 SNORD101-201ENST00000384027 73 ntBASIC-0.15□□□□□ -2.43
SHANK1Q9Y566 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.15□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.15□□□□□ -2.43
SHANK1Q9Y566 SNORD114-12-201ENST00000365400 75 ntBASIC-0.15□□□□□ -2.43
SHANK1Q9Y566 RNU6-880P-201ENST00000384526 107 ntBASIC-0.15□□□□□ -2.43
SHANK1Q9Y566 MIR548U-201ENST00000390728 81 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms