Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
RTCBQ9Y3I0 Y_RNA.12-201ENST00000362393 112 ntBASIC1.67□□□□□ -2.14
RTCBQ9Y3I0 Y_RNA.207-201ENST00000364142 106 ntBASIC1.67□□□□□ -2.14
RTCBQ9Y3I0 Y_RNA.532-201ENST00000384590 113 ntBASIC1.67□□□□□ -2.14
RTCBQ9Y3I0 MIR222-201ENST00000384992 110 ntBASIC1.67□□□□□ -2.14
RTCBQ9Y3I0 MIR320A-201ENST00000385302 82 ntBASIC1.67□□□□□ -2.14
RTCBQ9Y3I0 snoU13.17-201ENST00000458802 104 ntBASIC1.67□□□□□ -2.14
RTCBQ9Y3I0 YWHAEP2-201ENST00000580066 112 ntBASIC1.67□□□□□ -2.14
RTCBQ9Y3I0 YWHAEP3-201ENST00000582767 121 ntBASIC1.67□□□□□ -2.14
RTCBQ9Y3I0 AC002429.1-201ENST00000437672 148 ntBASIC1.66□□□□□ -2.14
RTCBQ9Y3I0 RNU6-523P-201ENST00000516304 54 ntBASIC1.66□□□□□ -2.14
RTCBQ9Y3I0 MIR4484-201ENST00000582855 83 ntBASIC1.66□□□□□ -2.14
RTCBQ9Y3I0 SNORD114-27-201ENST00000363766 70 ntBASIC1.65□□□□□ -2.15
RTCBQ9Y3I0 Y_RNA.174-201ENST00000363781 105 ntBASIC1.65□□□□□ -2.15
RTCBQ9Y3I0 MIR520E-201ENST00000384867 87 ntBASIC1.65□□□□□ -2.15
RTCBQ9Y3I0 MIR3134-201ENST00000579433 74 ntBASIC1.65□□□□□ -2.15
RTCBQ9Y3I0 MIR6515-201ENST00000619843 57 ntBASIC1.65□□□□□ -2.15
RTCBQ9Y3I0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.65□□□□□ -2.15
RTCBQ9Y3I0 Y_RNA.32-201ENST00000362589 110 ntBASIC1.64□□□□□ -2.15
RTCBQ9Y3I0 RNU6-411P-201ENST00000384451 107 ntBASIC1.64□□□□□ -2.15
RTCBQ9Y3I0 AC074348.1-201ENST00000426503 132 ntBASIC1.64□□□□□ -2.15
RTCBQ9Y3I0 SNORA31.14-201ENST00000516728 116 ntBASIC1.64□□□□□ -2.15
RTCBQ9Y3I0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.64□□□□□ -2.15
RTCBQ9Y3I0 MIR3140-201ENST00000583685 90 ntBASIC1.64□□□□□ -2.15
RTCBQ9Y3I0 uc_338.16-201ENST00000621804 95 ntBASIC1.64□□□□□ -2.15
RTCBQ9Y3I0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RTCBQ9Y3I0 SNORD115-44-201ENST00000365391 82 ntBASIC1.63□□□□□ -2.15
RTCBQ9Y3I0 SNORA25-201ENST00000384384 134 ntBASIC1.63□□□□□ -2.15
RTCBQ9Y3I0 RPS29P1-201ENST00000465274 159 ntBASIC1.63□□□□□ -2.15
RTCBQ9Y3I0 MIR451A-201ENST00000385059 72 ntBASIC1.62□□□□□ -2.15
RTCBQ9Y3I0 RNU6-1057P-201ENST00000517162 102 ntBASIC1.62□□□□□ -2.15
RTCBQ9Y3I0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.62□□□□□ -2.15
RTCBQ9Y3I0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RTCBQ9Y3I0 Y_RNA.681-201ENST00000516445 113 ntBASIC1.61□□□□□ -2.15
RTCBQ9Y3I0 RNA5SP327-201ENST00000362494 101 ntBASIC1.6□□□□□ -2.15
RTCBQ9Y3I0 SNORD115-24-201ENST00000363528 82 ntBASIC1.6□□□□□ -2.15
RTCBQ9Y3I0 RNU6-287P-201ENST00000516230 98 ntBASIC1.6□□□□□ -2.15
RTCBQ9Y3I0 RNU7-13P-201ENST00000516413 62 ntBASIC1.6□□□□□ -2.15
RTCBQ9Y3I0 RNU6-70P-201ENST00000516438 60 ntBASIC1.6□□□□□ -2.15
RTCBQ9Y3I0 AL136317.1-201ENST00000612653 226 ntBASIC1.6□□□□□ -2.15
RTCBQ9Y3I0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.6□□□□□ -2.15
RTCBQ9Y3I0 RNU6-340P-201ENST00000364005 107 ntBASIC1.59□□□□□ -2.15
RTCBQ9Y3I0 Y_RNA.371-201ENST00000365591 113 ntBASIC1.59□□□□□ -2.15
RTCBQ9Y3I0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RTCBQ9Y3I0 RNU6-1052P-201ENST00000411398 104 ntBASIC1.59□□□□□ -2.15
RTCBQ9Y3I0 RNU6-719P-201ENST00000516671 104 ntBASIC1.59□□□□□ -2.15
RTCBQ9Y3I0 RNU6-1223P-201ENST00000517124 104 ntBASIC1.59□□□□□ -2.15
RTCBQ9Y3I0 SNORD114-26-201ENST00000363543 72 ntBASIC1.58□□□□□ -2.16
RTCBQ9Y3I0 RNA5SP403-201ENST00000363598 108 ntBASIC1.58□□□□□ -2.16
RTCBQ9Y3I0 RNU2-59P-201ENST00000410482 191 ntBASIC1.58□□□□□ -2.16
RTCBQ9Y3I0 AC097510.1-201ENST00000510945 133 ntBASIC1.58□□□□□ -2.16
RTCBQ9Y3I0 RNA5SP61-201ENST00000516453 100 ntBASIC1.58□□□□□ -2.16
RTCBQ9Y3I0 RNU6-1110P-201ENST00000516462 101 ntBASIC1.58□□□□□ -2.16
RTCBQ9Y3I0 MIR6788-201ENST00000618842 66 ntBASIC1.58□□□□□ -2.16
RTCBQ9Y3I0 MIR6767-201ENST00000637302 66 ntBASIC1.58□□□□□ -2.16
RTCBQ9Y3I0 RNU6-681P-201ENST00000364012 104 ntBASIC1.57□□□□□ -2.16
RTCBQ9Y3I0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
RTCBQ9Y3I0 U3.27-201ENST00000391237 200 ntBASIC1.57□□□□□ -2.16
RTCBQ9Y3I0 MIR151B-201ENST00000584249 96 ntBASIC1.57□□□□□ -2.16
RTCBQ9Y3I0 PVT1_3.1-201ENST00000620853 95 ntBASIC1.57□□□□□ -2.16
RTCBQ9Y3I0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
RTCBQ9Y3I0 Y_RNA.36-201ENST00000362602 112 ntBASIC1.56□□□□□ -2.16
RTCBQ9Y3I0 RNA5SP117-201ENST00000365294 118 ntBASIC1.56□□□□□ -2.16
RTCBQ9Y3I0 SNORA24B-201ENST00000384176 131 ntBASIC1.56□□□□□ -2.16
RTCBQ9Y3I0 SNORD89-201ENST00000390981 114 ntBASIC1.56□□□□□ -2.16
RTCBQ9Y3I0 Y_RNA.606-201ENST00000410579 103 ntBASIC1.56□□□□□ -2.16
RTCBQ9Y3I0 FABP5P4-201ENST00000437203 171 ntBASIC1.56□□□□□ -2.16
RTCBQ9Y3I0 AC002350.1-201ENST00000490759 375 ntBASIC1.56□□□□□ -2.16
RTCBQ9Y3I0 RNU6-871P-201ENST00000516122 100 ntBASIC1.56□□□□□ -2.16
RTCBQ9Y3I0 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.56□□□□□ -2.16
RTCBQ9Y3I0 RPS29P23-201ENST00000458635 123 ntBASIC1.55□□□□□ -2.16
RTCBQ9Y3I0 RNU6-1015P-201ENST00000517121 99 ntBASIC1.55□□□□□ -2.16
RTCBQ9Y3I0 RNU7-161P-201ENST00000517289 62 ntBASIC1.55□□□□□ -2.16
RTCBQ9Y3I0 SNORA8.1-201ENST00000384250 140 ntBASIC1.54□□□□□ -2.16
RTCBQ9Y3I0 RNU6-154P-201ENST00000384306 106 ntBASIC1.54□□□□□ -2.16
RTCBQ9Y3I0 MIR758-201ENST00000390227 88 ntBASIC1.54□□□□□ -2.16
RTCBQ9Y3I0 MIR942-201ENST00000401111 86 ntBASIC1.54□□□□□ -2.16
RTCBQ9Y3I0 MIR548J-201ENST00000408833 112 ntBASIC1.54□□□□□ -2.16
RTCBQ9Y3I0 U7.7-201ENST00000459276 60 ntBASIC1.54□□□□□ -2.16
RTCBQ9Y3I0 AC114801.3-201ENST00000510231 177 ntBASIC1.54□□□□□ -2.16
RTCBQ9Y3I0 MIR664A-201ENST00000626086 82 ntBASIC1.54□□□□□ -2.16
RTCBQ9Y3I0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RTCBQ9Y3I0 MIR19B1-201ENST00000384829 87 ntBASIC1.53□□□□□ -2.16
RTCBQ9Y3I0 RNU6-788P-201ENST00000390967 104 ntBASIC1.53□□□□□ -2.16
RTCBQ9Y3I0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.53□□□□□ -2.16
RTCBQ9Y3I0 MIR2113-201ENST00000459007 91 ntBASIC1.53□□□□□ -2.16
RTCBQ9Y3I0 RNU7-104P-201ENST00000459398 79 ntBASIC1.53□□□□□ -2.16
RTCBQ9Y3I0 RNU6-135P-201ENST00000516769 101 ntBASIC1.53□□□□□ -2.16
RTCBQ9Y3I0 MIR3920-201ENST00000581751 86 ntBASIC1.53□□□□□ -2.16
RTCBQ9Y3I0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RTCBQ9Y3I0 RNU6-1126P-201ENST00000384002 107 ntBASIC1.52□□□□□ -2.17
RTCBQ9Y3I0 SNORD105-201ENST00000386910 85 ntBASIC1.52□□□□□ -2.17
RTCBQ9Y3I0 RNU6-687P-201ENST00000516443 89 ntBASIC1.52□□□□□ -2.17
RTCBQ9Y3I0 MIR4295-201ENST00000585286 85 ntBASIC1.52□□□□□ -2.17
RTCBQ9Y3I0 U6.81-201ENST00000612550 106 ntBASIC1.52□□□□□ -2.17
RTCBQ9Y3I0 MIR6779-201ENST00000617283 64 ntBASIC1.52□□□□□ -2.17
RTCBQ9Y3I0 RNU6-824P-201ENST00000363724 104 ntBASIC1.51□□□□□ -2.17
RTCBQ9Y3I0 MIR598-201ENST00000384868 97 ntBASIC1.51□□□□□ -2.17
RTCBQ9Y3I0 RNU6-1177P-201ENST00000391058 104 ntBASIC1.51□□□□□ -2.17
RTCBQ9Y3I0 RNU6-587P-201ENST00000391282 106 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms