Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RNA5SP275-201ENST00000363936 118 ntBASIC-0.39□□□□□ -2.47
SHROOM4Q9ULL8 SNORA25.13-201ENST00000516395 103 ntBASIC-0.39□□□□□ -2.47
SHROOM4Q9ULL8 RN7SL660P-201ENST00000614852 299 ntBASIC-0.39□□□□□ -2.47
SHROOM4Q9ULL8 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.4□□□□□ -2.47
SHROOM4Q9ULL8 RNA5SP300-201ENST00000391197 107 ntBASIC-0.4□□□□□ -2.47
SHROOM4Q9ULL8 MIR548G-201ENST00000408442 89 ntBASIC-0.4□□□□□ -2.47
SHROOM4Q9ULL8 AC096531.1-201ENST00000419107 107 ntBASIC-0.4□□□□□ -2.47
SHROOM4Q9ULL8 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.4□□□□□ -2.47
SHROOM4Q9ULL8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.4□□□□□ -2.47
SHROOM4Q9ULL8 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.41□□□□□ -2.47
SHROOM4Q9ULL8 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.41□□□□□ -2.47
SHROOM4Q9ULL8 MIR516B1-201ENST00000385211 90 ntBASIC-0.41□□□□□ -2.47
SHROOM4Q9ULL8 RNU6-781P-201ENST00000516377 101 ntBASIC-0.41□□□□□ -2.47
SHROOM4Q9ULL8 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.41□□□□□ -2.47
SHROOM4Q9ULL8 SNORD36A-201ENST00000362874 73 ntBASIC-0.41□□□□□ -2.48
SHROOM4Q9ULL8 MTND5P41-201ENST00000517498 206 ntBASIC-0.41□□□□□ -2.48
SHROOM4Q9ULL8 RNU6-235P-201ENST00000362644 107 ntBASIC-0.42□□□□□ -2.48
SHROOM4Q9ULL8 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.42□□□□□ -2.48
SHROOM4Q9ULL8 MIR3681-201ENST00000580089 72 ntBASIC-0.42□□□□□ -2.48
SHROOM4Q9ULL8 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.43□□□□□ -2.48
SHROOM4Q9ULL8 MIR1207-201ENST00000408249 87 ntBASIC-0.43□□□□□ -2.48
SHROOM4Q9ULL8 SNORD126-201ENST00000459475 77 ntBASIC-0.43□□□□□ -2.48
SHROOM4Q9ULL8 RNU6-794P-201ENST00000517261 64 ntBASIC-0.43□□□□□ -2.48
SHROOM4Q9ULL8 MIR3666-201ENST00000607845 111 ntBASIC-0.43□□□□□ -2.48
SHROOM4Q9ULL8 AC069503.3-201ENST00000618674 145 ntBASIC-0.43□□□□□ -2.48
SHROOM4Q9ULL8 MIR6514-201ENST00000622549 70 ntBASIC-0.43□□□□□ -2.48
SHROOM4Q9ULL8 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.43□□□□□ -2.48
SHROOM4Q9ULL8 MIR655-201ENST00000362159 97 ntBASIC-0.44□□□□□ -2.48
SHROOM4Q9ULL8 MIR519E-201ENST00000385075 84 ntBASIC-0.44□□□□□ -2.48
SHROOM4Q9ULL8 MTND5P18-201ENST00000445624 1801 ntBASIC-0.44□□□□□ -2.48
SHROOM4Q9ULL8 RNA5SP272-201ENST00000516095 111 ntBASIC-0.44□□□□□ -2.48
SHROOM4Q9ULL8 RNU6-426P-201ENST00000516464 97 ntBASIC-0.44□□□□□ -2.48
SHROOM4Q9ULL8 CR383656.4-201ENST00000546909 122 ntBASIC-0.44□□□□□ -2.48
SHROOM4Q9ULL8 MIR4788-201ENST00000639104 80 ntBASIC-0.44□□□□□ -2.48
SHROOM4Q9ULL8 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.45□□□□□ -2.48
SHROOM4Q9ULL8 AC114755.3-201ENST00000481111 251 ntBASIC-0.45□□□□□ -2.48
SHROOM4Q9ULL8 RNU6-287P-201ENST00000516230 98 ntBASIC-0.45□□□□□ -2.48
SHROOM4Q9ULL8 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.45□□□□□ -2.48
SHROOM4Q9ULL8 AL162726.3-218ENST00000636401 95 ntBASIC-0.45□□□□□ -2.48
SHROOM4Q9ULL8 SNORD114-11-201ENST00000363738 75 ntBASIC-0.46□□□□□ -2.48
SHROOM4Q9ULL8 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.46□□□□□ -2.48
SHROOM4Q9ULL8 RNU6-480P-201ENST00000384332 107 ntBASIC-0.46□□□□□ -2.48
SHROOM4Q9ULL8 SNORA40-201ENST00000388090 126 ntBASIC-0.46□□□□□ -2.48
SHROOM4Q9ULL8 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.46□□□□□ -2.48
SHROOM4Q9ULL8 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.46□□□□□ -2.48
SHROOM4Q9ULL8 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.46□□□□□ -2.48
SHROOM4Q9ULL8 AL442128.1-201ENST00000615151 90 ntBASIC-0.46□□□□□ -2.48
SHROOM4Q9ULL8 MIR548AZ-201ENST00000616567 95 ntBASIC-0.46□□□□□ -2.48
SHROOM4Q9ULL8 uc_338.36-201ENST00000622331 158 ntBASIC-0.46□□□□□ -2.48
SHROOM4Q9ULL8 SNORD75.1-201ENST00000408373 60 ntBASIC-0.47□□□□□ -2.48
SHROOM4Q9ULL8 MIR6507-201ENST00000613630 70 ntBASIC-0.47□□□□□ -2.48
SHROOM4Q9ULL8 MIR4263-201ENST00000584745 83 ntBASIC-0.48□□□□□ -2.49
SHROOM4Q9ULL8 AC090425.1-201ENST00000610007 140 ntBASIC-0.48□□□□□ -2.49
SHROOM4Q9ULL8 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.48□□□□□ -2.49
SHROOM4Q9ULL8 SNORD58C-201ENST00000365223 64 ntBASIC-0.48□□□□□ -2.49
SHROOM4Q9ULL8 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.48□□□□□ -2.49
SHROOM4Q9ULL8 MIR2113-201ENST00000459007 91 ntBASIC-0.48□□□□□ -2.49
SHROOM4Q9ULL8 MIR4460-201ENST00000577862 86 ntBASIC-0.48□□□□□ -2.49
SHROOM4Q9ULL8 YWHAEP2-201ENST00000580066 112 ntBASIC-0.48□□□□□ -2.49
SHROOM4Q9ULL8 SNORD114-3-201ENST00000364969 75 ntBASIC-0.49□□□□□ -2.49
SHROOM4Q9ULL8 RNU6-816P-201ENST00000390914 107 ntBASIC-0.49□□□□□ -2.49
SHROOM4Q9ULL8 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.49□□□□□ -2.49
SHROOM4Q9ULL8 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.49□□□□□ -2.49
SHROOM4Q9ULL8 RNU6-284P-201ENST00000411105 106 ntBASIC-0.49□□□□□ -2.49
SHROOM4Q9ULL8 MTND4LP9-201ENST00000427694 174 ntBASIC-0.49□□□□□ -2.49
SHROOM4Q9ULL8 MIR4436A-201ENST00000585278 85 ntBASIC-0.49□□□□□ -2.49
SHROOM4Q9ULL8 TRDV1-202ENST00000621643 102 ntBASIC-0.49□□□□□ -2.49
SHROOM4Q9ULL8 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.5□□□□□ -2.49
SHROOM4Q9ULL8 AC244250.2-201ENST00000418731 148 ntBASIC-0.5□□□□□ -2.49
SHROOM4Q9ULL8 AC093423.1-201ENST00000440817 142 ntBASIC-0.5□□□□□ -2.49
SHROOM4Q9ULL8 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.5□□□□□ -2.49
SHROOM4Q9ULL8 RNU7-200P-201ENST00000516105 62 ntBASIC-0.5□□□□□ -2.49
SHROOM4Q9ULL8 AL590491.3-201ENST00000610731 82 ntBASIC-0.5□□□□□ -2.49
SHROOM4Q9ULL8 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.5□□□□□ -2.49
SHROOM4Q9ULL8 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.5□□□□□ -2.49
SHROOM4Q9ULL8 RNU6-811P-201ENST00000384069 107 ntBASIC-0.51□□□□□ -2.49
SHROOM4Q9ULL8 MIR876-201ENST00000401147 81 ntBASIC-0.51□□□□□ -2.49
SHROOM4Q9ULL8 MIR548AG2-201ENST00000581228 64 ntBASIC-0.51□□□□□ -2.49
SHROOM4Q9ULL8 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.52□□□□□ -2.49
SHROOM4Q9ULL8 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.52□□□□□ -2.49
SHROOM4Q9ULL8 MIR539-201ENST00000365690 78 ntBASIC-0.52□□□□□ -2.49
SHROOM4Q9ULL8 AL391099.1-201ENST00000624635 187 ntBASIC-0.52□□□□□ -2.49
SHROOM4Q9ULL8 MIR181B2-201ENST00000385004 89 ntBASIC-0.53□□□□□ -2.49
SHROOM4Q9ULL8 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.54□□□□□ -2.5
SHROOM4Q9ULL8 U8.6-201ENST00000364939 135 ntBASIC-0.54□□□□□ -2.5
SHROOM4Q9ULL8 MIR4320-201ENST00000636981 65 ntBASIC-0.54□□□□□ -2.5
SHROOM4Q9ULL8 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.55□□□□□ -2.5
SHROOM4Q9ULL8 AC109327.2-201ENST00000448339 378 ntBASIC-0.55□□□□□ -2.5
SHROOM4Q9ULL8 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.55□□□□□ -2.5
SHROOM4Q9ULL8 MIR216B-201ENST00000390186 82 ntBASIC-0.56□□□□□ -2.5
SHROOM4Q9ULL8 RNA5SP169-201ENST00000517268 117 ntBASIC-0.56□□□□□ -2.5
SHROOM4Q9ULL8 MIR4432-201ENST00000581823 84 ntBASIC-0.56□□□□□ -2.5
SHROOM4Q9ULL8 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
SHROOM4Q9ULL8 MIR4473-201ENST00000583731 91 ntBASIC-0.57□□□□□ -2.5
SHROOM4Q9ULL8 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.57□□□□□ -2.5
SHROOM4Q9ULL8 MIR148A-201ENST00000362215 68 ntBASIC-0.58□□□□□ -2.5
SHROOM4Q9ULL8 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.58□□□□□ -2.5
SHROOM4Q9ULL8 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.58□□□□□ -2.5
SHROOM4Q9ULL8 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.58□□□□□ -2.5
SHROOM4Q9ULL8 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 500.5 ms