Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.31□□□□□ -2.62
HPF1Q9NWY4 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.31□□□□□ -2.62
HPF1Q9NWY4 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.31□□□□□ -2.62
HPF1Q9NWY4 RNU6-476P-201ENST00000384726 107 ntBASIC-1.31□□□□□ -2.62
HPF1Q9NWY4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.31□□□□□ -2.62
HPF1Q9NWY4 AC097510.1-201ENST00000510945 133 ntBASIC-1.31□□□□□ -2.62
HPF1Q9NWY4 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.31□□□□□ -2.62
HPF1Q9NWY4 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.32□□□□□ -2.62
HPF1Q9NWY4 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.32□□□□□ -2.62
HPF1Q9NWY4 MIR451A-201ENST00000385059 72 ntBASIC-1.32□□□□□ -2.62
HPF1Q9NWY4 SNORD83B-201ENST00000386745 93 ntBASIC-1.32□□□□□ -2.62
HPF1Q9NWY4 MIR548E-201ENST00000408287 88 ntBASIC-1.32□□□□□ -2.62
HPF1Q9NWY4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.32□□□□□ -2.62
HPF1Q9NWY4 RNY1P9-201ENST00000532431 109 ntBASIC-1.32□□□□□ -2.62
HPF1Q9NWY4 AP002392.1-201ENST00000537692 208 ntBASIC-1.32□□□□□ -2.62
HPF1Q9NWY4 AL117187.1-201ENST00000555482 181 ntBASIC-1.32□□□□□ -2.62
HPF1Q9NWY4 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.33□□□□□ -2.62
HPF1Q9NWY4 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.33□□□□□ -2.62
HPF1Q9NWY4 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.33□□□□□ -2.62
HPF1Q9NWY4 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.33□□□□□ -2.62
HPF1Q9NWY4 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.34□□□□□ -2.62
HPF1Q9NWY4 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.34□□□□□ -2.62
HPF1Q9NWY4 RNU7-121P-201ENST00000516604 62 ntBASIC-1.34□□□□□ -2.62
HPF1Q9NWY4 MIR3128-201ENST00000581957 66 ntBASIC-1.34□□□□□ -2.62
HPF1Q9NWY4 AC008737.2-201ENST00000599446 118 ntBASIC-1.34□□□□□ -2.62
HPF1Q9NWY4 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.35□□□□□ -2.63
HPF1Q9NWY4 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.35□□□□□ -2.63
HPF1Q9NWY4 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.35□□□□□ -2.63
HPF1Q9NWY4 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.35□□□□□ -2.63
HPF1Q9NWY4 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.35□□□□□ -2.63
HPF1Q9NWY4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.35□□□□□ -2.63
HPF1Q9NWY4 AC022559.1-201ENST00000520905 205 ntBASIC-1.35□□□□□ -2.63
HPF1Q9NWY4 MIR8068-201ENST00000618032 68 ntBASIC-1.35□□□□□ -2.63
HPF1Q9NWY4 MIR1263-201ENST00000408324 86 ntBASIC-1.36□□□□□ -2.63
HPF1Q9NWY4 RNA5SP266-201ENST00000410273 108 ntBASIC-1.36□□□□□ -2.63
HPF1Q9NWY4 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.36□□□□□ -2.63
HPF1Q9NWY4 RNU6-719P-201ENST00000516671 104 ntBASIC-1.36□□□□□ -2.63
HPF1Q9NWY4 MIR3121-201ENST00000579680 77 ntBASIC-1.36□□□□□ -2.63
HPF1Q9NWY4 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.37□□□□□ -2.63
HPF1Q9NWY4 RNU6-235P-201ENST00000362644 107 ntBASIC-1.37□□□□□ -2.63
HPF1Q9NWY4 RNU6-363P-201ENST00000362895 105 ntBASIC-1.37□□□□□ -2.63
HPF1Q9NWY4 AL117351.2-201ENST00000513571 157 ntBASIC-1.37□□□□□ -2.63
HPF1Q9NWY4 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.37□□□□□ -2.63
HPF1Q9NWY4 RNU6-111P-201ENST00000517179 105 ntBASIC-1.37□□□□□ -2.63
HPF1Q9NWY4 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.38□□□□□ -2.63
HPF1Q9NWY4 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.38□□□□□ -2.63
HPF1Q9NWY4 RNU6-409P-201ENST00000384114 104 ntBASIC-1.38□□□□□ -2.63
HPF1Q9NWY4 MIR587-201ENST00000384845 96 ntBASIC-1.38□□□□□ -2.63
HPF1Q9NWY4 SNORD57-201ENST00000448188 72 ntBASIC-1.38□□□□□ -2.63
HPF1Q9NWY4 RNU6-797P-201ENST00000363101 109 ntBASIC-1.39□□□□□ -2.63
HPF1Q9NWY4 SNORD74.6-201ENST00000364796 70 ntBASIC-1.39□□□□□ -2.63
HPF1Q9NWY4 MIR548D2-201ENST00000384955 97 ntBASIC-1.39□□□□□ -2.63
HPF1Q9NWY4 U3.27-201ENST00000391237 200 ntBASIC-1.39□□□□□ -2.63
HPF1Q9NWY4 SNORD18.2-201ENST00000459604 70 ntBASIC-1.39□□□□□ -2.63
HPF1Q9NWY4 FGF7P7-201ENST00000514120 227 ntBASIC-1.39□□□□□ -2.63
HPF1Q9NWY4 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.39□□□□□ -2.63
HPF1Q9NWY4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.39□□□□□ -2.63
HPF1Q9NWY4 AC130289.1-201ENST00000577321 73 ntBASIC-1.39□□□□□ -2.63
HPF1Q9NWY4 AL627230.5-201ENST00000619807 58 ntBASIC-1.39□□□□□ -2.63
HPF1Q9NWY4 SNORA20.1-201ENST00000364790 130 ntBASIC-1.4□□□□□ -2.63
HPF1Q9NWY4 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.4□□□□□ -2.63
HPF1Q9NWY4 MIR606-201ENST00000384851 96 ntBASIC-1.4□□□□□ -2.63
HPF1Q9NWY4 SNORD42B-201ENST00000458893 67 ntBASIC-1.4□□□□□ -2.63
HPF1Q9NWY4 RN7SKP19-201ENST00000516016 252 ntBASIC-1.4□□□□□ -2.63
HPF1Q9NWY4 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.41□□□□□ -2.64
HPF1Q9NWY4 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.41□□□□□ -2.64
HPF1Q9NWY4 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.41□□□□□ -2.64
HPF1Q9NWY4 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.41□□□□□ -2.64
HPF1Q9NWY4 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.41□□□□□ -2.64
HPF1Q9NWY4 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.41□□□□□ -2.64
HPF1Q9NWY4 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.41□□□□□ -2.64
HPF1Q9NWY4 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.42□□□□□ -2.64
HPF1Q9NWY4 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.42□□□□□ -2.64
HPF1Q9NWY4 RNU6-915P-201ENST00000364943 103 ntBASIC-1.42□□□□□ -2.64
HPF1Q9NWY4 RNU4-11P-201ENST00000365287 132 ntBASIC-1.42□□□□□ -2.64
HPF1Q9NWY4 RNA5SP136-201ENST00000410906 107 ntBASIC-1.42□□□□□ -2.64
HPF1Q9NWY4 AL353813.1-201ENST00000440700 253 ntBASIC-1.42□□□□□ -2.64
HPF1Q9NWY4 SCARNA17-201ENST00000516183 144 ntBASIC-1.42□□□□□ -2.64
HPF1Q9NWY4 RNU6-65P-201ENST00000516332 98 ntBASIC-1.42□□□□□ -2.64
HPF1Q9NWY4 AL442128.1-201ENST00000615151 90 ntBASIC-1.42□□□□□ -2.64
HPF1Q9NWY4 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.42□□□□□ -2.64
HPF1Q9NWY4 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.43□□□□□ -2.64
HPF1Q9NWY4 RNA5SP331-201ENST00000364986 107 ntBASIC-1.43□□□□□ -2.64
HPF1Q9NWY4 RNU6-905P-201ENST00000384434 107 ntBASIC-1.43□□□□□ -2.64
HPF1Q9NWY4 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.43□□□□□ -2.64
HPF1Q9NWY4 RNU6-460P-201ENST00000391158 108 ntBASIC-1.43□□□□□ -2.64
HPF1Q9NWY4 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.43□□□□□ -2.64
HPF1Q9NWY4 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.43□□□□□ -2.64
HPF1Q9NWY4 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.43□□□□□ -2.64
HPF1Q9NWY4 MIR4536-1-201ENST00000583537 88 ntBASIC-1.43□□□□□ -2.64
HPF1Q9NWY4 MIR6773-201ENST00000612812 74 ntBASIC-1.43□□□□□ -2.64
HPF1Q9NWY4 MIR6738-201ENST00000619620 64 ntBASIC-1.44□□□□□ -2.64
HPF1Q9NWY4 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.45□□□□□ -2.64
HPF1Q9NWY4 MIR1302-3-201ENST00000408128 138 ntBASIC-1.45□□□□□ -2.64
HPF1Q9NWY4 AC062037.2-201ENST00000610137 73 ntBASIC-1.45□□□□□ -2.64
HPF1Q9NWY4 uc_338.19-201ENST00000616808 99 ntBASIC-1.45□□□□□ -2.64
HPF1Q9NWY4 RNU6-647P-201ENST00000364243 107 ntBASIC-1.46□□□□□ -2.64
HPF1Q9NWY4 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.46□□□□□ -2.64
HPF1Q9NWY4 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.46□□□□□ -2.64
HPF1Q9NWY4 AC072026.1-201ENST00000605023 201 ntBASIC-1.46□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 253.9 ms