Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 SNORD113.3-201ENST00000364630 78 ntBASIC1.66□□□□□ -2.14
RC3H2Q9HBD1 MIR517C-201ENST00000385103 95 ntBASIC1.66□□□□□ -2.14
RC3H2Q9HBD1 SNORA67.6-201ENST00000391093 99 ntBASIC1.66□□□□□ -2.14
RC3H2Q9HBD1 SNORA75.2-201ENST00000391138 150 ntBASIC1.66□□□□□ -2.14
RC3H2Q9HBD1 SNORA75.3-201ENST00000391231 150 ntBASIC1.66□□□□□ -2.14
RC3H2Q9HBD1 MIR8053-201ENST00000613344 75 ntBASIC1.66□□□□□ -2.14
RC3H2Q9HBD1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RC3H2Q9HBD1 SNORD113.1-201ENST00000363280 73 ntBASIC1.65□□□□□ -2.15
RC3H2Q9HBD1 SNORA7.1-201ENST00000363750 139 ntBASIC1.65□□□□□ -2.15
RC3H2Q9HBD1 MIR489-201ENST00000384923 84 ntBASIC1.65□□□□□ -2.15
RC3H2Q9HBD1 RNU6-1177P-201ENST00000391058 104 ntBASIC1.65□□□□□ -2.15
RC3H2Q9HBD1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.65□□□□□ -2.15
RC3H2Q9HBD1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.65□□□□□ -2.15
RC3H2Q9HBD1 RNU7-40P-201ENST00000516397 64 ntBASIC1.65□□□□□ -2.15
RC3H2Q9HBD1 RNU6-902P-201ENST00000517212 91 ntBASIC1.65□□□□□ -2.15
RC3H2Q9HBD1 RNU6-369P-201ENST00000362515 102 ntBASIC1.64□□□□□ -2.15
RC3H2Q9HBD1 RNU6-382P-201ENST00000365181 106 ntBASIC1.64□□□□□ -2.15
RC3H2Q9HBD1 Y_RNA.330-201ENST00000365230 109 ntBASIC1.64□□□□□ -2.15
RC3H2Q9HBD1 RNU6-535P-201ENST00000384722 107 ntBASIC1.64□□□□□ -2.15
RC3H2Q9HBD1 RNU4-37P-201ENST00000410214 84 ntBASIC1.64□□□□□ -2.15
RC3H2Q9HBD1 AC244505.6-201ENST00000452829 130 ntBASIC1.64□□□□□ -2.15
RC3H2Q9HBD1 AC048334.1-201ENST00000477975 159 ntBASIC1.64□□□□□ -2.15
RC3H2Q9HBD1 RNU6-287P-201ENST00000516230 98 ntBASIC1.64□□□□□ -2.15
RC3H2Q9HBD1 SNORA31.24-201ENST00000517232 57 ntBASIC1.64□□□□□ -2.15
RC3H2Q9HBD1 MIR6504-201ENST00000613520 61 ntBASIC1.64□□□□□ -2.15
RC3H2Q9HBD1 MIR4676-201ENST00000583078 72 ntBASIC1.63□□□□□ -2.15
RC3H2Q9HBD1 AL109933.3-201ENST00000619095 188 ntBASIC1.63□□□□□ -2.15
RC3H2Q9HBD1 MIR4773-1-201ENST00000637203 78 ntBASIC1.63□□□□□ -2.15
RC3H2Q9HBD1 RNU6-1216P-201ENST00000362590 107 ntBASIC1.62□□□□□ -2.15
RC3H2Q9HBD1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.62□□□□□ -2.15
RC3H2Q9HBD1 RNU6-499P-201ENST00000365615 107 ntBASIC1.62□□□□□ -2.15
RC3H2Q9HBD1 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
RC3H2Q9HBD1 RPS26P5-201ENST00000418544 335 ntBASIC1.62□□□□□ -2.15
RC3H2Q9HBD1 RNU1-123P-201ENST00000458950 160 ntBASIC1.62□□□□□ -2.15
RC3H2Q9HBD1 MIR4511-201ENST00000582784 87 ntBASIC1.62□□□□□ -2.15
RC3H2Q9HBD1 AC008608.1-201ENST00000603910 127 ntBASIC1.62□□□□□ -2.15
RC3H2Q9HBD1 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.62□□□□□ -2.15
RC3H2Q9HBD1 AC106800.4-201ENST00000614905 153 ntBASIC1.61□□□□□ -2.15
RC3H2Q9HBD1 U3.27-201ENST00000391237 200 ntBASIC1.6□□□□□ -2.15
RC3H2Q9HBD1 RNU7-102P-201ENST00000458948 62 ntBASIC1.6□□□□□ -2.15
RC3H2Q9HBD1 RNU6-274P-201ENST00000459566 107 ntBASIC1.6□□□□□ -2.15
RC3H2Q9HBD1 RNU6-752P-201ENST00000516376 102 ntBASIC1.6□□□□□ -2.15
RC3H2Q9HBD1 AC023827.1-201ENST00000569247 97 ntBASIC1.6□□□□□ -2.15
RC3H2Q9HBD1 MIR548AG2-201ENST00000581228 64 ntBASIC1.6□□□□□ -2.15
RC3H2Q9HBD1 AC244098.3-201ENST00000424803 96 ntBASIC1.59□□□□□ -2.15
RC3H2Q9HBD1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.59□□□□□ -2.15
RC3H2Q9HBD1 AC103706.3-201ENST00000636297 85 ntBASIC1.59□□□□□ -2.15
RC3H2Q9HBD1 Y_RNA.224-201ENST00000364308 111 ntBASIC1.58□□□□□ -2.16
RC3H2Q9HBD1 RNU6-669P-201ENST00000365575 107 ntBASIC1.58□□□□□ -2.16
RC3H2Q9HBD1 SNORD111-201ENST00000408139 94 ntBASIC1.58□□□□□ -2.16
RC3H2Q9HBD1 AC110620.1-201ENST00000416042 228 ntBASIC1.58□□□□□ -2.16
RC3H2Q9HBD1 AL354695.1-201ENST00000427935 228 ntBASIC1.58□□□□□ -2.16
RC3H2Q9HBD1 SNORA31.2-201ENST00000516019 134 ntBASIC1.58□□□□□ -2.16
RC3H2Q9HBD1 RNU6-982P-201ENST00000516216 102 ntBASIC1.58□□□□□ -2.16
RC3H2Q9HBD1 RNA5SP102-201ENST00000516865 106 ntBASIC1.58□□□□□ -2.16
RC3H2Q9HBD1 RNU6-1057P-201ENST00000517162 102 ntBASIC1.58□□□□□ -2.16
RC3H2Q9HBD1 AL078603.1-201ENST00000603824 313 ntBASIC1.58□□□□□ -2.16
RC3H2Q9HBD1 AC027335.2-201ENST00000624030 375 ntBASIC1.58□□□□□ -2.16
RC3H2Q9HBD1 Y_RNA.32-201ENST00000362589 110 ntBASIC1.57□□□□□ -2.16
RC3H2Q9HBD1 SNORD115-44-201ENST00000365391 82 ntBASIC1.57□□□□□ -2.16
RC3H2Q9HBD1 RNU6-364P-201ENST00000384387 107 ntBASIC1.57□□□□□ -2.16
RC3H2Q9HBD1 MIR938-201ENST00000401216 83 ntBASIC1.57□□□□□ -2.16
RC3H2Q9HBD1 MIR4804-201ENST00000581683 73 ntBASIC1.57□□□□□ -2.16
RC3H2Q9HBD1 AL157834.3-201ENST00000615543 103 ntBASIC1.57□□□□□ -2.16
RC3H2Q9HBD1 AL353770.2-201ENST00000620024 78 ntBASIC1.57□□□□□ -2.16
RC3H2Q9HBD1 RNU6-1187P-201ENST00000364771 110 ntBASIC1.56□□□□□ -2.16
RC3H2Q9HBD1 RNU6-1126P-201ENST00000384002 107 ntBASIC1.56□□□□□ -2.16
RC3H2Q9HBD1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.56□□□□□ -2.16
RC3H2Q9HBD1 SNORA40.6-201ENST00000391153 128 ntBASIC1.56□□□□□ -2.16
RC3H2Q9HBD1 SNORD75.2-201ENST00000408784 58 ntBASIC1.56□□□□□ -2.16
RC3H2Q9HBD1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.56□□□□□ -2.16
RC3H2Q9HBD1 RNU1-92P-201ENST00000517017 135 ntBASIC1.56□□□□□ -2.16
RC3H2Q9HBD1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
RC3H2Q9HBD1 RNA5SP403-201ENST00000363598 108 ntBASIC1.55□□□□□ -2.16
RC3H2Q9HBD1 RNA5SP363-201ENST00000365072 115 ntBASIC1.55□□□□□ -2.16
RC3H2Q9HBD1 RNU7-56P-201ENST00000458744 62 ntBASIC1.55□□□□□ -2.16
RC3H2Q9HBD1 RNU7-21P-201ENST00000459430 62 ntBASIC1.55□□□□□ -2.16
RC3H2Q9HBD1 snoU13.18-201ENST00000459483 104 ntBASIC1.55□□□□□ -2.16
RC3H2Q9HBD1 uc_338.16-201ENST00000621804 95 ntBASIC1.55□□□□□ -2.16
RC3H2Q9HBD1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RC3H2Q9HBD1 MIR633-201ENST00000384821 98 ntBASIC1.54□□□□□ -2.16
RC3H2Q9HBD1 RNU7-13P-201ENST00000516413 62 ntBASIC1.54□□□□□ -2.16
RC3H2Q9HBD1 SNORA31.14-201ENST00000516728 116 ntBASIC1.54□□□□□ -2.16
RC3H2Q9HBD1 RNU7-161P-201ENST00000517289 62 ntBASIC1.54□□□□□ -2.16
RC3H2Q9HBD1 MIR3920-201ENST00000581751 86 ntBASIC1.54□□□□□ -2.16
RC3H2Q9HBD1 RNU6-495P-201ENST00000362995 107 ntBASIC1.53□□□□□ -2.16
RC3H2Q9HBD1 AL691482.2-201ENST00000457453 84 ntBASIC1.53□□□□□ -2.16
RC3H2Q9HBD1 RNU7-24P-201ENST00000458867 62 ntBASIC1.53□□□□□ -2.16
RC3H2Q9HBD1 NAMPTP3-201ENST00000569273 224 ntBASIC1.53□□□□□ -2.16
RC3H2Q9HBD1 AL591704.2-201ENST00000421658 181 ntBASIC1.52□□□□□ -2.17
RC3H2Q9HBD1 MIR3660-201ENST00000584845 100 ntBASIC1.52□□□□□ -2.17
RC3H2Q9HBD1 SNORD115-24-201ENST00000363528 82 ntBASIC1.51□□□□□ -2.17
RC3H2Q9HBD1 RNU6-1039P-201ENST00000383931 107 ntBASIC1.51□□□□□ -2.17
RC3H2Q9HBD1 RNU6-910P-201ENST00000390844 107 ntBASIC1.51□□□□□ -2.17
RC3H2Q9HBD1 MIR1304-201ENST00000408243 91 ntBASIC1.51□□□□□ -2.17
RC3H2Q9HBD1 AC079150.2-201ENST00000443733 78 ntBASIC1.51□□□□□ -2.17
RC3H2Q9HBD1 MIR4452-201ENST00000583004 71 ntBASIC1.51□□□□□ -2.17
RC3H2Q9HBD1 AC069503.3-201ENST00000618674 145 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 220.6 ms