Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 MTND3P22-201ENST00000510932 243 ntBASIC-3.21□□□□□ -2.92
SCAPERQ9BY12 RNU6-1174P-201ENST00000517278 101 ntBASIC-3.21□□□□□ -2.92
SCAPERQ9BY12 UBE2WP1-201ENST00000362030 340 ntBASIC-3.22□□□□□ -2.93
SCAPERQ9BY12 RNU4-90P-201ENST00000362773 141 ntBASIC-3.22□□□□□ -2.93
SCAPERQ9BY12 RNU6-1152P-201ENST00000384576 107 ntBASIC-3.22□□□□□ -2.93
SCAPERQ9BY12 RNU6-780P-201ENST00000391030 104 ntBASIC-3.22□□□□□ -2.93
SCAPERQ9BY12 Y_RNA.584-201ENST00000391090 114 ntBASIC-3.22□□□□□ -2.93
SCAPERQ9BY12 RNU6-101P-201ENST00000410323 104 ntBASIC-3.22□□□□□ -2.93
SCAPERQ9BY12 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-3.22□□□□□ -2.93
SCAPERQ9BY12 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.22□□□□□ -2.93
SCAPERQ9BY12 Y_RNA.83-201ENST00000363005 113 ntBASIC-3.23□□□□□ -2.93
SCAPERQ9BY12 Y_RNA.344-201ENST00000365381 112 ntBASIC-3.23□□□□□ -2.93
SCAPERQ9BY12 Y_RNA.396-201ENST00000383949 103 ntBASIC-3.23□□□□□ -2.93
SCAPERQ9BY12 Y_RNA.419-201ENST00000384041 102 ntBASIC-3.23□□□□□ -2.93
SCAPERQ9BY12 RNU6-211P-201ENST00000384047 107 ntBASIC-3.23□□□□□ -2.93
SCAPERQ9BY12 SNORD19B.1-201ENST00000630615 80 ntBASIC-3.23□□□□□ -2.93
SCAPERQ9BY12 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-3.24□□□□□ -2.93
SCAPERQ9BY12 SNORD38.1-201ENST00000363863 68 ntBASIC-3.25□□□□□ -2.93
SCAPERQ9BY12 Y_RNA.793-201ENST00000411222 111 ntBASIC-3.25□□□□□ -2.93
SCAPERQ9BY12 RNU6-518P-201ENST00000516056 96 ntBASIC-3.25□□□□□ -2.93
SCAPERQ9BY12 MIRLET7F1-201ENST00000362202 87 ntBASIC-3.26□□□□□ -2.93
SCAPERQ9BY12 RNU6-1109P-201ENST00000391187 107 ntBASIC-3.26□□□□□ -2.93
SCAPERQ9BY12 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-3.26□□□□□ -2.93
SCAPERQ9BY12 RNU6-65P-201ENST00000516332 98 ntBASIC-3.26□□□□□ -2.93
SCAPERQ9BY12 Y_RNA.701-201ENST00000516812 110 ntBASIC-3.26□□□□□ -2.93
SCAPERQ9BY12 MIR4536-1-201ENST00000583537 88 ntBASIC-3.26□□□□□ -2.93
SCAPERQ9BY12 AL138825.1-201ENST00000618587 192 ntBASIC-3.26□□□□□ -2.93
SCAPERQ9BY12 MTND5P26-201ENST00000426018 1752 ntBASIC-3.26□□□□□ -2.93
SCAPERQ9BY12 Y_RNA.64-201ENST00000362845 102 ntBASIC-3.27□□□□□ -2.93
SCAPERQ9BY12 Y_RNA.602-201ENST00000410535 92 ntBASIC-3.27□□□□□ -2.93
SCAPERQ9BY12 MIR3140-201ENST00000583685 90 ntBASIC-3.27□□□□□ -2.93
SCAPERQ9BY12 AC015540.1-201ENST00000615828 501 ntBASIC-3.27□□□□□ -2.93
SCAPERQ9BY12 Y_RNA.781-201ENST00000620301 103 ntBASIC-3.27□□□□□ -2.93
SCAPERQ9BY12 RNU6-246P-201ENST00000384702 107 ntBASIC-3.27□□□□□ -2.93
SCAPERQ9BY12 RNU6-1267P-201ENST00000410747 107 ntBASIC-3.27□□□□□ -2.93
SCAPERQ9BY12 AC119751.7-201ENST00000600494 245 ntBASIC-3.27□□□□□ -2.93
SCAPERQ9BY12 MIR4272-201ENST00000635924 64 ntBASIC-3.27□□□□□ -2.93
SCAPERQ9BY12 SNORA25.1-201ENST00000362326 128 ntBASIC-3.28□□□□□ -2.94
SCAPERQ9BY12 Y_RNA.646-201ENST00000410980 101 ntBASIC-3.28□□□□□ -2.94
SCAPERQ9BY12 RNU6-956P-201ENST00000458868 103 ntBASIC-3.28□□□□□ -2.94
SCAPERQ9BY12 SNORA24B-201ENST00000384176 131 ntBASIC-3.29□□□□□ -2.94
SCAPERQ9BY12 Y_RNA.773-201ENST00000607168 90 ntBASIC-3.29□□□□□ -2.94
SCAPERQ9BY12 DLEU2_1.1-201ENST00000612089 120 ntBASIC-3.29□□□□□ -2.94
SCAPERQ9BY12 DLEU2_1.2-201ENST00000614667 120 ntBASIC-3.29□□□□□ -2.94
SCAPERQ9BY12 AL512310.12-203ENST00000640543 90 ntBASIC-3.29□□□□□ -2.94
SCAPERQ9BY12 Y_RNA.82-201ENST00000363000 102 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 Y_RNA.92-201ENST00000363043 102 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 Y_RNA.235-201ENST00000364412 102 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 Y_RNA.306-201ENST00000365015 102 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 Y_RNA.308-201ENST00000365043 101 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 Y_RNA.312-201ENST00000365089 102 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 Y_RNA.322-201ENST00000365151 102 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 RNU6-1283P-201ENST00000365314 105 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 Y_RNA.394-201ENST00000383942 103 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 MIR203A-201ENST00000384836 110 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 RNU6-630P-201ENST00000391258 106 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 Y_RNA.650-201ENST00000459002 102 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 Y_RNA.777-201ENST00000516982 102 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 Y_RNA.771-201ENST00000598668 102 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 AL603755.1-201ENST00000619504 163 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 Y_RNA.789-201ENST00000622480 102 ntBASIC-3.3□□□□□ -2.94
SCAPERQ9BY12 RNU6-326P-201ENST00000365480 107 ntBASIC-3.31□□□□□ -2.94
SCAPERQ9BY12 RNU6-132P-201ENST00000383863 107 ntBASIC-3.31□□□□□ -2.94
SCAPERQ9BY12 Y_RNA.463-201ENST00000384271 102 ntBASIC-3.31□□□□□ -2.94
SCAPERQ9BY12 RNU2-38P-201ENST00000410856 79 ntBASIC-3.31□□□□□ -2.94
SCAPERQ9BY12 AC097484.2-201ENST00000509147 251 ntBASIC-3.31□□□□□ -2.94
SCAPERQ9BY12 RNU6-803P-201ENST00000516034 102 ntBASIC-3.31□□□□□ -2.94
SCAPERQ9BY12 RNU6-415P-201ENST00000516252 97 ntBASIC-3.31□□□□□ -2.94
SCAPERQ9BY12 Y_RNA.695-201ENST00000516715 107 ntBASIC-3.31□□□□□ -2.94
SCAPERQ9BY12 RNU7-6P-201ENST00000516845 62 ntBASIC-3.31□□□□□ -2.94
SCAPERQ9BY12 AC006254.2-201ENST00000603259 279 ntBASIC-3.31□□□□□ -2.94
SCAPERQ9BY12 RNU6-890P-201ENST00000384121 107 ntBASIC-3.32□□□□□ -2.94
SCAPERQ9BY12 RNU6-310P-201ENST00000384655 107 ntBASIC-3.32□□□□□ -2.94
SCAPERQ9BY12 MIR521-2-201ENST00000384818 87 ntBASIC-3.32□□□□□ -2.94
SCAPERQ9BY12 RNU6-510P-201ENST00000391239 108 ntBASIC-3.32□□□□□ -2.94
SCAPERQ9BY12 AL021921.1-201ENST00000442774 93 ntBASIC-3.32□□□□□ -2.94
SCAPERQ9BY12 AL121914.1-201ENST00000450188 156 ntBASIC-3.32□□□□□ -2.94
SCAPERQ9BY12 AC037487.3-201ENST00000606668 112 ntBASIC-3.32□□□□□ -2.94
SCAPERQ9BY12 RNU6-861P-201ENST00000516745 106 ntBASIC-3.33□□□□□ -2.94
SCAPERQ9BY12 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-3.33□□□□□ -2.94
SCAPERQ9BY12 AL132765.2-201ENST00000610812 351 ntBASIC-3.33□□□□□ -2.94
SCAPERQ9BY12 MIR6509-201ENST00000614603 85 ntBASIC-3.33□□□□□ -2.94
SCAPERQ9BY12 AL606534.2-204ENST00000635008 178 ntBASIC-3.33□□□□□ -2.94
SCAPERQ9BY12 RNU6-130P-201ENST00000411112 103 ntBASIC-3.34□□□□□ -2.94
SCAPERQ9BY12 MTATP6P21-201ENST00000440681 189 ntBASIC-3.34□□□□□ -2.94
SCAPERQ9BY12 RNU6-1313P-201ENST00000362622 102 ntBASIC-3.35□□□□□ -2.95
SCAPERQ9BY12 Y_RNA.527-201ENST00000384573 102 ntBASIC-3.35□□□□□ -2.95
SCAPERQ9BY12 RNU6-976P-201ENST00000516086 111 ntBASIC-3.35□□□□□ -2.95
SCAPERQ9BY12 RNU6-1046P-201ENST00000516538 107 ntBASIC-3.35□□□□□ -2.95
SCAPERQ9BY12 Y_RNA.721-201ENST00000517207 102 ntBASIC-3.35□□□□□ -2.95
SCAPERQ9BY12 MIR376A1-201ENST00000616574 68 ntBASIC-3.35□□□□□ -2.95
SCAPERQ9BY12 RNU6-1039P-201ENST00000383931 107 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 RNU6-141P-201ENST00000410499 105 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 RNU6-259P-201ENST00000383999 107 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 RNU6-1042P-201ENST00000384204 107 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 Y_RNA.483-201ENST00000384380 101 ntBASIC-3.36□□□□□ -2.95
Retrieved 100 of 98,524 protein–RNA pairs in 1481.7 ms