Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 SNORD38.1-201ENST00000363863 68 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 Y_RNA.190-201ENST00000363964 101 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 RNU6-726P-201ENST00000364680 107 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 Y_RNA.309-201ENST00000365046 111 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 Y_RNA.342-201ENST00000365352 113 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 RNU6-1056P-201ENST00000383996 107 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 MIR635-201ENST00000384830 98 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 SNORD90-201ENST00000391145 111 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 RNU7-85P-201ENST00000458851 63 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.22□□□□□ -2.37
CDX2Q99626 Y_RNA.809-201ENST00000516058 95 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 RNU6-1018P-201ENST00000516577 106 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 MIR4694-201ENST00000578534 80 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 MIR3920-201ENST00000581751 86 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 RNU6-90P-201ENST00000606352 106 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 AC103810.7-201ENST00000607821 91 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 AC092634.7-201ENST00000621022 103 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 MIR6828-201ENST00000636181 60 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 Y_RNA.57-201ENST00000362806 113 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 RNU6-1327P-201ENST00000365302 105 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 Y_RNA.377-201ENST00000365644 108 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 RNU6-815P-201ENST00000384080 113 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 MIR518A1-201ENST00000385068 85 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 RNU6-269P-201ENST00000391077 97 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.21□□□□□ -2.38
CDX2Q99626 RNU7-61P-201ENST00000515897 61 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 RNU6-75P-201ENST00000515944 104 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 SCARNA16.5-201ENST00000517114 183 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 AL513043.2-201ENST00000573941 143 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 Y_RNA.95-201ENST00000363079 95 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 Y_RNA.273-201ENST00000364703 102 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 MIR488-201ENST00000365739 83 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 RNU6-132P-201ENST00000383863 107 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 RNU6-147P-201ENST00000383983 107 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 Y_RNA.423-201ENST00000384057 113 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 SNORA51.5-201ENST00000384126 131 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 RNU6-571P-201ENST00000384128 107 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.2□□□□□ -2.38
CDX2Q99626 AL035461.1-201ENST00000421490 332 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 RNA5SP227-201ENST00000516184 113 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 RNU6-1265P-201ENST00000516342 103 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 AC138869.1-201ENST00000568623 124 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 MIR548H5-201ENST00000580314 60 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 AP001180.6-201ENST00000584918 159 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 MTRNR2L2-201ENST00000604882 87 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.2□□□□□ -2.38
CDX2Q99626 MIRLET7F1-201ENST00000362202 87 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 RNU6-1260P-201ENST00000362944 107 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 Y_RNA.78-201ENST00000362970 110 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 Y_RNA.174-201ENST00000363781 105 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 RNU6-756P-201ENST00000383997 107 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 RNY1P7-201ENST00000384743 110 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 MIR604-201ENST00000384880 94 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 MIR519A1-201ENST00000385257 85 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 Y_RNA.629-201ENST00000411368 105 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 RNA5SP484-201ENST00000458857 111 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 AC026421.1-201ENST00000519101 163 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 MIR4639-201ENST00000584938 69 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 MIR4768-201ENST00000585270 74 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 TRDV1-202ENST00000621643 102 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 SNORD114-31-201ENST00000363219 75 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 RNU6-640P-201ENST00000363693 105 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 Y_RNA.290-201ENST00000364879 114 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 Y_RNA.348-201ENST00000365403 103 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 RNU6-1254P-201ENST00000391266 104 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 Y_RNA.601-201ENST00000410500 113 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 SNORA40.8-201ENST00000411034 126 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 AC097635.1-201ENST00000450678 155 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 SCARNA23-201ENST00000516060 130 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 RNU6-287P-201ENST00000516230 98 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 AC108676.2-201ENST00000605225 163 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 AL162376.1-201ENST00000624117 175 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 MIR499B-201ENST00000636498 73 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 Y_RNA.207-201ENST00000364142 106 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNU6-755P-201ENST00000364400 103 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 Y_RNA.283-201ENST00000364798 112 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNU6-905P-201ENST00000384434 107 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNU6-813P-201ENST00000384691 107 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 MIR519E-201ENST00000385075 84 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNA5SP292-201ENST00000390974 118 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 SNORD41.1-201ENST00000391000 69 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNU6-1052P-201ENST00000411398 104 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNU6-469P-201ENST00000516253 101 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNU6-719P-201ENST00000516671 104 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNU6-919P-201ENST00000516731 104 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 MIR4696-201ENST00000581431 70 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 U7.3-201ENST00000616123 62 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNU6-834P-201ENST00000362367 110 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 RNU6-766P-201ENST00000362478 107 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 SNORD95.1-201ENST00000364099 68 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 RNU6-1229P-201ENST00000364295 107 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 SNORD115-27-201ENST00000364430 82 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 SNORD58A-201ENST00000383875 65 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 RNU6-1126P-201ENST00000384002 107 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 RNU6-1081P-201ENST00000384537 107 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 RNU6-243P-201ENST00000391140 107 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 MIR1302-5-201ENST00000408164 150 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 HMGN2P22-201ENST00000427588 175 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 224.6 ms