Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MIR5007-201ENST00000583098 95 ntBASIC2.09□□□□□ -2.07
CNTNAP3BQ96NU0 AC008608.1-201ENST00000603910 127 ntBASIC2.09□□□□□ -2.07
CNTNAP3BQ96NU0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CNTNAP3BQ96NU0 RNU6-302P-201ENST00000365249 107 ntBASIC2.08□□□□□ -2.08
CNTNAP3BQ96NU0 MIR6739-201ENST00000622461 75 ntBASIC2.08□□□□□ -2.08
CNTNAP3BQ96NU0 RNU6-934P-201ENST00000365154 107 ntBASIC2.07□□□□□ -2.08
CNTNAP3BQ96NU0 Y_RNA.327-201ENST00000365201 102 ntBASIC2.07□□□□□ -2.08
CNTNAP3BQ96NU0 SNORD42B-201ENST00000458893 67 ntBASIC2.07□□□□□ -2.08
CNTNAP3BQ96NU0 AC079140.2-201ENST00000506193 142 ntBASIC2.07□□□□□ -2.08
CNTNAP3BQ96NU0 RNU7-13P-201ENST00000516413 62 ntBASIC2.07□□□□□ -2.08
CNTNAP3BQ96NU0 MIR6840-201ENST00000611937 71 ntBASIC2.07□□□□□ -2.08
CNTNAP3BQ96NU0 AC022709.1-201ENST00000615967 87 ntBASIC2.07□□□□□ -2.08
CNTNAP3BQ96NU0 uc_338.10-201ENST00000621872 182 ntBASIC2.07□□□□□ -2.08
CNTNAP3BQ96NU0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.06□□□□□ -2.08
CNTNAP3BQ96NU0 SNORA2.1-201ENST00000363089 137 ntBASIC2.06□□□□□ -2.08
CNTNAP3BQ96NU0 RNU6-54P-201ENST00000365563 107 ntBASIC2.06□□□□□ -2.08
CNTNAP3BQ96NU0 MIR548AD-201ENST00000584780 82 ntBASIC2.06□□□□□ -2.08
CNTNAP3BQ96NU0 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.06□□□□□ -2.08
CNTNAP3BQ96NU0 RNA5SP403-201ENST00000363598 108 ntBASIC2.05□□□□□ -2.08
CNTNAP3BQ96NU0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.05□□□□□ -2.08
CNTNAP3BQ96NU0 RNA5SP233-201ENST00000459153 113 ntBASIC2.05□□□□□ -2.08
CNTNAP3BQ96NU0 RNA5SP182-201ENST00000516064 82 ntBASIC2.05□□□□□ -2.08
CNTNAP3BQ96NU0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CNTNAP3BQ96NU0 MIR302D-201ENST00000362275 68 ntBASIC2.04□□□□□ -2.08
CNTNAP3BQ96NU0 RNA5SP37-201ENST00000365420 130 ntBASIC2.04□□□□□ -2.08
CNTNAP3BQ96NU0 RNU6-520P-201ENST00000384717 104 ntBASIC2.04□□□□□ -2.08
CNTNAP3BQ96NU0 AC079804.2-201ENST00000490376 200 ntBASIC2.04□□□□□ -2.08
CNTNAP3BQ96NU0 SNORA25.15-201ENST00000516487 89 ntBASIC2.04□□□□□ -2.08
CNTNAP3BQ96NU0 RNU6-980P-201ENST00000516925 103 ntBASIC2.04□□□□□ -2.08
CNTNAP3BQ96NU0 MIR3198-2-201ENST00000577868 80 ntBASIC2.04□□□□□ -2.08
CNTNAP3BQ96NU0 MIR3937-201ENST00000580135 106 ntBASIC2.04□□□□□ -2.08
CNTNAP3BQ96NU0 MIR548V-201ENST00000584165 80 ntBASIC2.04□□□□□ -2.08
CNTNAP3BQ96NU0 MIR21-201ENST00000362134 72 ntBASIC2.03□□□□□ -2.08
CNTNAP3BQ96NU0 RNU6-392P-201ENST00000364926 101 ntBASIC2.03□□□□□ -2.08
CNTNAP3BQ96NU0 SNORD1A-201ENST00000364968 72 ntBASIC2.03□□□□□ -2.08
CNTNAP3BQ96NU0 MIR617-201ENST00000385030 97 ntBASIC2.03□□□□□ -2.08
CNTNAP3BQ96NU0 AC025033.1-201ENST00000463883 194 ntBASIC2.03□□□□□ -2.08
CNTNAP3BQ96NU0 MIR4771-2-201ENST00000577758 74 ntBASIC2.03□□□□□ -2.08
CNTNAP3BQ96NU0 MIR4285-201ENST00000581001 85 ntBASIC2.03□□□□□ -2.08
CNTNAP3BQ96NU0 MIR4771-1-201ENST00000582617 74 ntBASIC2.03□□□□□ -2.08
CNTNAP3BQ96NU0 SNORD113.3-201ENST00000364630 78 ntBASIC2.02□□□□□ -2.09
CNTNAP3BQ96NU0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.02□□□□□ -2.09
CNTNAP3BQ96NU0 RNU6-902P-201ENST00000517212 91 ntBASIC2.02□□□□□ -2.09
CNTNAP3BQ96NU0 MIR4303-201ENST00000581299 66 ntBASIC2.02□□□□□ -2.09
CNTNAP3BQ96NU0 AC106800.4-201ENST00000614905 153 ntBASIC2.02□□□□□ -2.09
CNTNAP3BQ96NU0 RNU4-52P-201ENST00000384209 138 ntBASIC2.01□□□□□ -2.09
CNTNAP3BQ96NU0 MIR630-201ENST00000384957 97 ntBASIC2.01□□□□□ -2.09
CNTNAP3BQ96NU0 MIR519E-201ENST00000385075 84 ntBASIC2.01□□□□□ -2.09
CNTNAP3BQ96NU0 AC067940.1-201ENST00000458411 300 ntBASIC2.01□□□□□ -2.09
CNTNAP3BQ96NU0 AC019176.1-201ENST00000518519 225 ntBASIC2.01□□□□□ -2.09
CNTNAP3BQ96NU0 AC036111.3-201ENST00000526389 112 ntBASIC2.01□□□□□ -2.09
CNTNAP3BQ96NU0 MIR6132-201ENST00000622083 109 ntBASIC2.01□□□□□ -2.09
CNTNAP3BQ96NU0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.01□□□□□ -2.09
CNTNAP3BQ96NU0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CNTNAP3BQ96NU0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CNTNAP3BQ96NU0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2□□□□□ -2.09
CNTNAP3BQ96NU0 SNORD114-22-201ENST00000365423 72 ntBASIC2□□□□□ -2.09
CNTNAP3BQ96NU0 RPS26P5-201ENST00000418544 335 ntBASIC2□□□□□ -2.09
CNTNAP3BQ96NU0 RNU7-95P-201ENST00000459222 64 ntBASIC2□□□□□ -2.09
CNTNAP3BQ96NU0 RNA5SP102-201ENST00000516865 106 ntBASIC2□□□□□ -2.09
CNTNAP3BQ96NU0 RNU7-161P-201ENST00000517289 62 ntBASIC2□□□□□ -2.09
CNTNAP3BQ96NU0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2□□□□□ -2.09
CNTNAP3BQ96NU0 RNU6-990P-201ENST00000364385 104 ntBASIC1.99□□□□□ -2.09
CNTNAP3BQ96NU0 RNU6-35P-201ENST00000384530 107 ntBASIC1.99□□□□□ -2.09
CNTNAP3BQ96NU0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CNTNAP3BQ96NU0 AC104435.1-201ENST00000483483 166 ntBASIC1.99□□□□□ -2.09
CNTNAP3BQ96NU0 RNA5SP147-201ENST00000516493 109 ntBASIC1.99□□□□□ -2.09
CNTNAP3BQ96NU0 MIR4676-201ENST00000583078 72 ntBASIC1.99□□□□□ -2.09
CNTNAP3BQ96NU0 MIR598-201ENST00000384868 97 ntBASIC1.98□□□□□ -2.09
CNTNAP3BQ96NU0 AL157398.1-201ENST00000452981 186 ntBASIC1.98□□□□□ -2.09
CNTNAP3BQ96NU0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.98□□□□□ -2.09
CNTNAP3BQ96NU0 MIR3664-201ENST00000579074 99 ntBASIC1.98□□□□□ -2.09
CNTNAP3BQ96NU0 ZNF355P-201ENST00000427301 3216 ntBASIC1.97□□□□□ -2.09
CNTNAP3BQ96NU0 RNU6V-201ENST00000384105 107 ntBASIC1.97□□□□□ -2.09
CNTNAP3BQ96NU0 HMGN2P38-201ENST00000423806 265 ntBASIC1.97□□□□□ -2.09
CNTNAP3BQ96NU0 RNU7-102P-201ENST00000458948 62 ntBASIC1.97□□□□□ -2.09
CNTNAP3BQ96NU0 RNA5SP200-201ENST00000516360 103 ntBASIC1.97□□□□□ -2.09
CNTNAP3BQ96NU0 uc_338.16-201ENST00000621804 95 ntBASIC1.97□□□□□ -2.09
CNTNAP3BQ96NU0 AC027335.2-201ENST00000624030 375 ntBASIC1.97□□□□□ -2.09
CNTNAP3BQ96NU0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CNTNAP3BQ96NU0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CNTNAP3BQ96NU0 SNORD115-24-201ENST00000363528 82 ntBASIC1.96□□□□□ -2.1
CNTNAP3BQ96NU0 RNU6-364P-201ENST00000384387 107 ntBASIC1.96□□□□□ -2.1
CNTNAP3BQ96NU0 MIR938-201ENST00000401216 83 ntBASIC1.96□□□□□ -2.1
CNTNAP3BQ96NU0 HMGN2P19-201ENST00000425149 265 ntBASIC1.96□□□□□ -2.1
CNTNAP3BQ96NU0 RNU7-40P-201ENST00000516397 64 ntBASIC1.96□□□□□ -2.1
CNTNAP3BQ96NU0 SNORA31.14-201ENST00000516728 116 ntBASIC1.96□□□□□ -2.1
CNTNAP3BQ96NU0 Y_RNA.783-201ENST00000613546 102 ntBASIC1.96□□□□□ -2.1
CNTNAP3BQ96NU0 AP000553.5-201ENST00000641933 54 ntBASIC1.96□□□□□ -2.1
CNTNAP3BQ96NU0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CNTNAP3BQ96NU0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
CNTNAP3BQ96NU0 Y_RNA.32-201ENST00000362589 110 ntBASIC1.95□□□□□ -2.1
CNTNAP3BQ96NU0 Y_RNA.250-201ENST00000364542 110 ntBASIC1.95□□□□□ -2.1
CNTNAP3BQ96NU0 AL356379.1-201ENST00000414105 126 ntBASIC1.95□□□□□ -2.1
CNTNAP3BQ96NU0 RNU7-174P-201ENST00000516248 59 ntBASIC1.95□□□□□ -2.1
CNTNAP3BQ96NU0 RNU6-165P-201ENST00000517170 99 ntBASIC1.95□□□□□ -2.1
CNTNAP3BQ96NU0 AL512310.8-201ENST00000550183 120 ntBASIC1.95□□□□□ -2.1
CNTNAP3BQ96NU0 U4.4-201ENST00000620626 117 ntBASIC1.95□□□□□ -2.1
CNTNAP3BQ96NU0 MIR6766-201ENST00000622641 72 ntBASIC1.95□□□□□ -2.1
CNTNAP3BQ96NU0 RNU6-698P-201ENST00000363523 107 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms