Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 RNU1-78P-201ENST00000391248 165 ntBASIC2.41□□□□□ -2.02
MS4A4AQ96JQ5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.41□□□□□ -2.02
MS4A4AQ96JQ5 RNU6-1089P-201ENST00000516473 104 ntBASIC2.41□□□□□ -2.02
MS4A4AQ96JQ5 SNORD114-4-201ENST00000363962 75 ntBASIC2.4□□□□□ -2.03
MS4A4AQ96JQ5 Y_RNA.783-201ENST00000613546 102 ntBASIC2.4□□□□□ -2.03
MS4A4AQ96JQ5 MIR6739-201ENST00000622461 75 ntBASIC2.4□□□□□ -2.03
MS4A4AQ96JQ5 Y_RNA.363-201ENST00000365529 113 ntBASIC2.39□□□□□ -2.03
MS4A4AQ96JQ5 MIR934-201ENST00000401241 83 ntBASIC2.39□□□□□ -2.03
MS4A4AQ96JQ5 MIR1287-201ENST00000408492 90 ntBASIC2.39□□□□□ -2.03
MS4A4AQ96JQ5 RNU1-123P-201ENST00000458950 160 ntBASIC2.39□□□□□ -2.03
MS4A4AQ96JQ5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MS4A4AQ96JQ5 RNA5SP393-201ENST00000363423 117 ntBASIC2.38□□□□□ -2.03
MS4A4AQ96JQ5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
MS4A4AQ96JQ5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
MS4A4AQ96JQ5 RNA5SP117-201ENST00000365294 118 ntBASIC2.37□□□□□ -2.03
MS4A4AQ96JQ5 RNU6-1162P-201ENST00000384443 104 ntBASIC2.37□□□□□ -2.03
MS4A4AQ96JQ5 RNU6-910P-201ENST00000390844 107 ntBASIC2.37□□□□□ -2.03
MS4A4AQ96JQ5 RNU6-656P-201ENST00000516785 107 ntBASIC2.37□□□□□ -2.03
MS4A4AQ96JQ5 snoU13.31-201ENST00000607291 104 ntBASIC2.37□□□□□ -2.03
MS4A4AQ96JQ5 MIR1827-201ENST00000408549 66 ntBASIC2.36□□□□□ -2.03
MS4A4AQ96JQ5 SNORD42B-201ENST00000458893 67 ntBASIC2.36□□□□□ -2.03
MS4A4AQ96JQ5 RNU6-469P-201ENST00000516253 101 ntBASIC2.36□□□□□ -2.03
MS4A4AQ96JQ5 AC018659.1-201ENST00000551083 169 ntBASIC2.36□□□□□ -2.03
MS4A4AQ96JQ5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MS4A4AQ96JQ5 MT-TY-201ENST00000387409 66 ntBASIC2.35□□□□□ -2.03
MS4A4AQ96JQ5 RNA5SP233-201ENST00000459153 113 ntBASIC2.35□□□□□ -2.03
MS4A4AQ96JQ5 SNORD79.1-201ENST00000516069 84 ntBASIC2.35□□□□□ -2.03
MS4A4AQ96JQ5 MIR4460-201ENST00000577862 86 ntBASIC2.35□□□□□ -2.03
MS4A4AQ96JQ5 MIR4639-201ENST00000584938 69 ntBASIC2.35□□□□□ -2.03
MS4A4AQ96JQ5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MS4A4AQ96JQ5 SNORD41.1-201ENST00000391000 69 ntBASIC2.34□□□□□ -2.03
MS4A4AQ96JQ5 MIR548L-201ENST00000408303 86 ntBASIC2.34□□□□□ -2.03
MS4A4AQ96JQ5 MIR4446-201ENST00000578505 67 ntBASIC2.34□□□□□ -2.03
MS4A4AQ96JQ5 AL136317.1-201ENST00000612653 226 ntBASIC2.34□□□□□ -2.03
MS4A4AQ96JQ5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
MS4A4AQ96JQ5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MS4A4AQ96JQ5 RNU6-446P-201ENST00000362827 106 ntBASIC2.33□□□□□ -2.04
MS4A4AQ96JQ5 RMST_2.1-201ENST00000617263 136 ntBASIC2.33□□□□□ -2.04
MS4A4AQ96JQ5 MIR7978-201ENST00000636158 59 ntBASIC2.33□□□□□ -2.04
MS4A4AQ96JQ5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
MS4A4AQ96JQ5 Z82195.2-201ENST00000612348 18351 ntBASIC2.32□□□□□ -2.04
MS4A4AQ96JQ5 RNA5SP147-201ENST00000516493 109 ntBASIC2.32□□□□□ -2.04
MS4A4AQ96JQ5 MIR5002-201ENST00000584713 97 ntBASIC2.32□□□□□ -2.04
MS4A4AQ96JQ5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
MS4A4AQ96JQ5 RNU6-936P-201ENST00000384005 107 ntBASIC2.31□□□□□ -2.04
MS4A4AQ96JQ5 SNORD12-201ENST00000391002 90 ntBASIC2.31□□□□□ -2.04
MS4A4AQ96JQ5 MIR378A-201ENST00000362177 66 ntBASIC2.3□□□□□ -2.04
MS4A4AQ96JQ5 RNU6-321P-201ENST00000410912 106 ntBASIC2.3□□□□□ -2.04
MS4A4AQ96JQ5 AC008834.1-201ENST00000511612 175 ntBASIC2.3□□□□□ -2.04
MS4A4AQ96JQ5 RNU6-902P-201ENST00000517212 91 ntBASIC2.3□□□□□ -2.04
MS4A4AQ96JQ5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.3□□□□□ -2.04
MS4A4AQ96JQ5 MIR548V-201ENST00000584165 80 ntBASIC2.3□□□□□ -2.04
MS4A4AQ96JQ5 FO624990.1-201ENST00000636373 85 ntBASIC2.3□□□□□ -2.04
MS4A4AQ96JQ5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
MS4A4AQ96JQ5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
MS4A4AQ96JQ5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
MS4A4AQ96JQ5 SNORA7.1-201ENST00000363750 139 ntBASIC2.29□□□□□ -2.04
MS4A4AQ96JQ5 AC002350.1-201ENST00000490759 375 ntBASIC2.29□□□□□ -2.04
MS4A4AQ96JQ5 MIR3670-2-201ENST00000582974 65 ntBASIC2.29□□□□□ -2.04
MS4A4AQ96JQ5 MIR3670-1-201ENST00000584160 65 ntBASIC2.29□□□□□ -2.04
MS4A4AQ96JQ5 MIR3670-3-201ENST00000584855 65 ntBASIC2.29□□□□□ -2.04
MS4A4AQ96JQ5 MIR3670-4-201ENST00000612260 65 ntBASIC2.29□□□□□ -2.04
MS4A4AQ96JQ5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MS4A4AQ96JQ5 SNORD60.1-201ENST00000362451 73 ntBASIC2.28□□□□□ -2.04
MS4A4AQ96JQ5 RNA5SP190-201ENST00000365222 118 ntBASIC2.28□□□□□ -2.04
MS4A4AQ96JQ5 DEFA7P-201ENST00000382676 285 ntBASIC2.28□□□□□ -2.04
MS4A4AQ96JQ5 RNU6-1184P-201ENST00000384588 108 ntBASIC2.28□□□□□ -2.04
MS4A4AQ96JQ5 MIR521-2-201ENST00000384818 87 ntBASIC2.28□□□□□ -2.04
MS4A4AQ96JQ5 SNORD113-2-201ENST00000391082 72 ntBASIC2.28□□□□□ -2.04
MS4A4AQ96JQ5 HMGN2P19-201ENST00000425149 265 ntBASIC2.28□□□□□ -2.04
MS4A4AQ96JQ5 AC025033.1-201ENST00000463883 194 ntBASIC2.28□□□□□ -2.04
MS4A4AQ96JQ5 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.28□□□□□ -2.04
MS4A4AQ96JQ5 SNORA70.22-201ENST00000517160 124 ntBASIC2.28□□□□□ -2.04
MS4A4AQ96JQ5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
MS4A4AQ96JQ5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
MS4A4AQ96JQ5 RNU6-990P-201ENST00000364385 104 ntBASIC2.27□□□□□ -2.05
MS4A4AQ96JQ5 MIR548C-201ENST00000384815 97 ntBASIC2.27□□□□□ -2.05
MS4A4AQ96JQ5 AC003989.2-201ENST00000440224 169 ntBASIC2.27□□□□□ -2.05
MS4A4AQ96JQ5 SNORD13-201ENST00000459299 104 ntBASIC2.27□□□□□ -2.05
MS4A4AQ96JQ5 AL137847.3-201ENST00000611521 109 ntBASIC2.27□□□□□ -2.05
MS4A4AQ96JQ5 AC244669.1-204ENST00000621564 178 ntBASIC2.27□□□□□ -2.05
MS4A4AQ96JQ5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
MS4A4AQ96JQ5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
MS4A4AQ96JQ5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
MS4A4AQ96JQ5 MIR6073-201ENST00000352083 89 ntBASIC2.26□□□□□ -2.05
MS4A4AQ96JQ5 SNORD28-201ENST00000384706 75 ntBASIC2.26□□□□□ -2.05
MS4A4AQ96JQ5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.26□□□□□ -2.05
MS4A4AQ96JQ5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.26□□□□□ -2.05
MS4A4AQ96JQ5 RNA5SP181-201ENST00000410246 98 ntBASIC2.26□□□□□ -2.05
MS4A4AQ96JQ5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.26□□□□□ -2.05
MS4A4AQ96JQ5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.25□□□□□ -2.05
MS4A4AQ96JQ5 AP1B1P2-201ENST00000416196 106 ntBASIC2.25□□□□□ -2.05
MS4A4AQ96JQ5 AC010297.1-201ENST00000623948 149 ntBASIC2.25□□□□□ -2.05
MS4A4AQ96JQ5 MIR644A-201ENST00000385262 94 ntBASIC2.24□□□□□ -2.05
MS4A4AQ96JQ5 RNU4-62P-201ENST00000410125 130 ntBASIC2.24□□□□□ -2.05
MS4A4AQ96JQ5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.24□□□□□ -2.05
MS4A4AQ96JQ5 MIR8070-201ENST00000616510 88 ntBASIC2.24□□□□□ -2.05
MS4A4AQ96JQ5 RNU1-141P-201ENST00000364623 158 ntBASIC2.23□□□□□ -2.05
MS4A4AQ96JQ5 SNORA15B-2-201ENST00000384058 135 ntBASIC2.23□□□□□ -2.05
MS4A4AQ96JQ5 SNORA15B-1-201ENST00000384334 135 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 686.9 ms