Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RNU6-1265P-201ENST00000516342 103 ntBASIC1.17□□□□□ -2.22
CHAMP1Q96JM3 CYP3A137P-201ENST00000562436 69 ntBASIC1.17□□□□□ -2.22
CHAMP1Q96JM3 MIR4536-1-201ENST00000583537 88 ntBASIC1.17□□□□□ -2.22
CHAMP1Q96JM3 TRDV1-202ENST00000621643 102 ntBASIC1.17□□□□□ -2.22
CHAMP1Q96JM3 AC010487.4-201ENST00000637027 61 ntBASIC1.17□□□□□ -2.22
CHAMP1Q96JM3 MIR573-201ENST00000384964 99 ntBASIC1.16□□□□□ -2.22
CHAMP1Q96JM3 RNU6-466P-201ENST00000391224 103 ntBASIC1.16□□□□□ -2.22
CHAMP1Q96JM3 AC025627.3-201ENST00000582078 182 ntBASIC1.16□□□□□ -2.22
CHAMP1Q96JM3 AC006160.2-201ENST00000637708 154 ntBASIC1.16□□□□□ -2.22
CHAMP1Q96JM3 RNU4-38P-201ENST00000364472 129 ntBASIC1.15□□□□□ -2.23
CHAMP1Q96JM3 RNU6-132P-201ENST00000383863 107 ntBASIC1.15□□□□□ -2.23
CHAMP1Q96JM3 RNU6-939P-201ENST00000384634 107 ntBASIC1.15□□□□□ -2.23
CHAMP1Q96JM3 MIR519C-201ENST00000385053 87 ntBASIC1.15□□□□□ -2.23
CHAMP1Q96JM3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CHAMP1Q96JM3 MTRNR2L2-201ENST00000604882 87 ntBASIC1.15□□□□□ -2.23
CHAMP1Q96JM3 MIR8087-201ENST00000612745 78 ntBASIC1.15□□□□□ -2.23
CHAMP1Q96JM3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
CHAMP1Q96JM3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CHAMP1Q96JM3 RNU7-171P-201ENST00000459581 62 ntBASIC1.14□□□□□ -2.23
CHAMP1Q96JM3 RNU6-65P-201ENST00000516332 98 ntBASIC1.14□□□□□ -2.23
CHAMP1Q96JM3 U6.100-201ENST00000636230 99 ntBASIC1.14□□□□□ -2.23
CHAMP1Q96JM3 RNA5SP403-201ENST00000363598 108 ntBASIC1.13□□□□□ -2.23
CHAMP1Q96JM3 Y_RNA.221-201ENST00000364248 96 ntBASIC1.13□□□□□ -2.23
CHAMP1Q96JM3 MIR644A-201ENST00000385262 94 ntBASIC1.13□□□□□ -2.23
CHAMP1Q96JM3 RNA5SP292-201ENST00000390974 118 ntBASIC1.13□□□□□ -2.23
CHAMP1Q96JM3 Y_RNA.611-201ENST00000410682 108 ntBASIC1.13□□□□□ -2.23
CHAMP1Q96JM3 RNU7-153P-201ENST00000516455 62 ntBASIC1.13□□□□□ -2.23
CHAMP1Q96JM3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.13□□□□□ -2.23
CHAMP1Q96JM3 RNU4-32P-201ENST00000363404 141 ntBASIC1.12□□□□□ -2.23
CHAMP1Q96JM3 RNA5SP117-201ENST00000365294 118 ntBASIC1.12□□□□□ -2.23
CHAMP1Q96JM3 MIR1236-201ENST00000408340 102 ntBASIC1.12□□□□□ -2.23
CHAMP1Q96JM3 RNU7-161P-201ENST00000517289 62 ntBASIC1.12□□□□□ -2.23
CHAMP1Q96JM3 MIR3612-201ENST00000579753 87 ntBASIC1.12□□□□□ -2.23
CHAMP1Q96JM3 MIR3064-201ENST00000581130 66 ntBASIC1.12□□□□□ -2.23
CHAMP1Q96JM3 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
CHAMP1Q96JM3 Y_RNA.258-201ENST00000364613 105 ntBASIC1.11□□□□□ -2.23
CHAMP1Q96JM3 RNU6-1276P-201ENST00000365372 104 ntBASIC1.11□□□□□ -2.23
CHAMP1Q96JM3 RNU6-787P-201ENST00000384032 107 ntBASIC1.11□□□□□ -2.23
CHAMP1Q96JM3 RNU6-811P-201ENST00000384069 107 ntBASIC1.11□□□□□ -2.23
CHAMP1Q96JM3 SNORD99-201ENST00000408612 74 ntBASIC1.11□□□□□ -2.23
CHAMP1Q96JM3 AC244098.3-201ENST00000424803 96 ntBASIC1.11□□□□□ -2.23
CHAMP1Q96JM3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
CHAMP1Q96JM3 MIRLET7F1-201ENST00000362202 87 ntBASIC1.1□□□□□ -2.23
CHAMP1Q96JM3 SNORD115-24-201ENST00000363528 82 ntBASIC1.1□□□□□ -2.23
CHAMP1Q96JM3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CHAMP1Q96JM3 MIR4696-201ENST00000581431 70 ntBASIC1.1□□□□□ -2.23
CHAMP1Q96JM3 AC104996.3-201ENST00000590718 94 ntBASIC1.1□□□□□ -2.23
CHAMP1Q96JM3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.09□□□□□ -2.23
CHAMP1Q96JM3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.09□□□□□ -2.23
CHAMP1Q96JM3 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
CHAMP1Q96JM3 AC093729.1-201ENST00000513074 128 ntBASIC1.09□□□□□ -2.23
CHAMP1Q96JM3 AC140658.3-201ENST00000567603 271 ntBASIC1.09□□□□□ -2.23
CHAMP1Q96JM3 AL627230.5-201ENST00000619807 58 ntBASIC1.09□□□□□ -2.23
CHAMP1Q96JM3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CHAMP1Q96JM3 RNU6-664P-201ENST00000362381 107 ntBASIC1.08□□□□□ -2.24
CHAMP1Q96JM3 SNORD18A-201ENST00000363753 72 ntBASIC1.08□□□□□ -2.24
CHAMP1Q96JM3 Y_RNA.426-201ENST00000384068 113 ntBASIC1.08□□□□□ -2.24
CHAMP1Q96JM3 Y_RNA.596-201ENST00000410462 109 ntBASIC1.08□□□□□ -2.24
CHAMP1Q96JM3 SNORA18.5-201ENST00000516616 101 ntBASIC1.08□□□□□ -2.24
CHAMP1Q96JM3 MIR3678-201ENST00000578455 94 ntBASIC1.08□□□□□ -2.24
CHAMP1Q96JM3 MIR1245B-201ENST00000636115 69 ntBASIC1.08□□□□□ -2.24
CHAMP1Q96JM3 RNU6-1187P-201ENST00000364771 110 ntBASIC1.07□□□□□ -2.24
CHAMP1Q96JM3 SNORD28-201ENST00000384706 75 ntBASIC1.07□□□□□ -2.24
CHAMP1Q96JM3 MIR1197-201ENST00000408818 88 ntBASIC1.07□□□□□ -2.24
CHAMP1Q96JM3 Y_RNA.607-201ENST00000410597 98 ntBASIC1.07□□□□□ -2.24
CHAMP1Q96JM3 MIR4698-201ENST00000577795 80 ntBASIC1.07□□□□□ -2.24
CHAMP1Q96JM3 MIR4666B-201ENST00000578142 81 ntBASIC1.07□□□□□ -2.24
CHAMP1Q96JM3 AC011195.1-201ENST00000578177 177 ntBASIC1.07□□□□□ -2.24
CHAMP1Q96JM3 AL353765.1-201ENST00000605514 183 ntBASIC1.07□□□□□ -2.24
CHAMP1Q96JM3 SNORD101-201ENST00000384027 73 ntBASIC1.06□□□□□ -2.24
CHAMP1Q96JM3 RNU6-242P-201ENST00000384359 107 ntBASIC1.06□□□□□ -2.24
CHAMP1Q96JM3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.06□□□□□ -2.24
CHAMP1Q96JM3 SNORA25.13-201ENST00000516395 103 ntBASIC1.06□□□□□ -2.24
CHAMP1Q96JM3 RNU6-135P-201ENST00000516769 101 ntBASIC1.06□□□□□ -2.24
CHAMP1Q96JM3 MIR4639-201ENST00000584938 69 ntBASIC1.06□□□□□ -2.24
CHAMP1Q96JM3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.06□□□□□ -2.24
CHAMP1Q96JM3 MIR6513-201ENST00000621188 64 ntBASIC1.06□□□□□ -2.24
CHAMP1Q96JM3 MIR18A-201ENST00000362310 71 ntBASIC1.05□□□□□ -2.24
CHAMP1Q96JM3 Y_RNA.219-201ENST00000364232 113 ntBASIC1.05□□□□□ -2.24
CHAMP1Q96JM3 Y_RNA.491-201ENST00000384417 107 ntBASIC1.05□□□□□ -2.24
CHAMP1Q96JM3 MIR548U-201ENST00000390728 81 ntBASIC1.05□□□□□ -2.24
CHAMP1Q96JM3 RNA5SP47-201ENST00000517230 109 ntBASIC1.05□□□□□ -2.24
CHAMP1Q96JM3 MIR4796-201ENST00000580742 81 ntBASIC1.05□□□□□ -2.24
CHAMP1Q96JM3 MIR3920-201ENST00000581751 86 ntBASIC1.05□□□□□ -2.24
CHAMP1Q96JM3 AC244669.1-204ENST00000621564 178 ntBASIC1.05□□□□□ -2.24
CHAMP1Q96JM3 MIR373-201ENST00000362273 69 ntBASIC1.04□□□□□ -2.24
CHAMP1Q96JM3 Y_RNA.207-201ENST00000364142 106 ntBASIC1.04□□□□□ -2.24
CHAMP1Q96JM3 SNORD90-201ENST00000391145 111 ntBASIC1.04□□□□□ -2.24
CHAMP1Q96JM3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CHAMP1Q96JM3 MIR936-201ENST00000401264 98 ntBASIC1.04□□□□□ -2.24
CHAMP1Q96JM3 MIR3973-201ENST00000579824 107 ntBASIC1.04□□□□□ -2.24
CHAMP1Q96JM3 MIR548AG2-201ENST00000581228 64 ntBASIC1.04□□□□□ -2.24
CHAMP1Q96JM3 RNU6-228P-201ENST00000362700 106 ntBASIC1.03□□□□□ -2.24
CHAMP1Q96JM3 RNU6-624P-201ENST00000363411 107 ntBASIC1.03□□□□□ -2.24
CHAMP1Q96JM3 RNU6-287P-201ENST00000516230 98 ntBASIC1.03□□□□□ -2.24
CHAMP1Q96JM3 MIR4714-201ENST00000580728 77 ntBASIC1.03□□□□□ -2.24
CHAMP1Q96JM3 MIR4661-201ENST00000582720 75 ntBASIC1.03□□□□□ -2.24
CHAMP1Q96JM3 MIR6857-201ENST00000613267 93 ntBASIC1.03□□□□□ -2.24
CHAMP1Q96JM3 SNORD115-37-201ENST00000363768 82 ntBASIC1.02□□□□□ -2.25
CHAMP1Q96JM3 Y_RNA.239-201ENST00000364444 113 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 357 ms