Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU6-1113P-201ENST00000384348 107 ntBASIC0.32□□□□□ -2.36
CHMP4CQ96CF2 AL161932.1-201ENST00000437408 146 ntBASIC0.32□□□□□ -2.36
CHMP4CQ96CF2 AC108740.1-201ENST00000498629 225 ntBASIC0.32□□□□□ -2.36
CHMP4CQ96CF2 RNU6-815P-201ENST00000384080 113 ntBASIC0.31□□□□□ -2.36
CHMP4CQ96CF2 RNU6-813P-201ENST00000384691 107 ntBASIC0.31□□□□□ -2.36
CHMP4CQ96CF2 Y_RNA.629-201ENST00000411368 105 ntBASIC0.31□□□□□ -2.36
CHMP4CQ96CF2 SCARNA23-201ENST00000516060 130 ntBASIC0.31□□□□□ -2.36
CHMP4CQ96CF2 RNU6-904P-201ENST00000516206 101 ntBASIC0.31□□□□□ -2.36
CHMP4CQ96CF2 AC069113.3-201ENST00000521019 150 ntBASIC0.31□□□□□ -2.36
CHMP4CQ96CF2 AC025521.1-201ENST00000621624 286 ntBASIC0.31□□□□□ -2.36
CHMP4CQ96CF2 Y_RNA.596-201ENST00000410462 109 ntBASIC0.3□□□□□ -2.36
CHMP4CQ96CF2 SNORA19.1-201ENST00000410656 129 ntBASIC0.3□□□□□ -2.36
CHMP4CQ96CF2 RNU6-795P-201ENST00000516323 103 ntBASIC0.3□□□□□ -2.36
CHMP4CQ96CF2 Y_RNA.709-201ENST00000516952 92 ntBASIC0.3□□□□□ -2.36
CHMP4CQ96CF2 MIR5706-201ENST00000579841 80 ntBASIC0.3□□□□□ -2.36
CHMP4CQ96CF2 MIR5093-201ENST00000583199 100 ntBASIC0.3□□□□□ -2.36
CHMP4CQ96CF2 U7.6-201ENST00000610841 64 ntBASIC0.3□□□□□ -2.36
CHMP4CQ96CF2 snoU13.11-201ENST00000459219 104 ntBASIC0.29□□□□□ -2.36
CHMP4CQ96CF2 Y_RNA.648-201ENST00000459455 110 ntBASIC0.29□□□□□ -2.36
CHMP4CQ96CF2 MIR548AI-201ENST00000579940 88 ntBASIC0.29□□□□□ -2.36
CHMP4CQ96CF2 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.29□□□□□ -2.36
CHMP4CQ96CF2 U6.100-201ENST00000636230 99 ntBASIC0.29□□□□□ -2.36
CHMP4CQ96CF2 U2.22-201ENST00000636441 106 ntBASIC0.29□□□□□ -2.36
CHMP4CQ96CF2 Y_RNA.96-201ENST00000363092 109 ntBASIC0.28□□□□□ -2.36
CHMP4CQ96CF2 RNA5SP128-201ENST00000365305 116 ntBASIC0.28□□□□□ -2.36
CHMP4CQ96CF2 Y_RNA.467-201ENST00000384297 102 ntBASIC0.28□□□□□ -2.36
CHMP4CQ96CF2 MIR617-201ENST00000385030 97 ntBASIC0.28□□□□□ -2.36
CHMP4CQ96CF2 RNU6-554P-201ENST00000410466 106 ntBASIC0.28□□□□□ -2.36
CHMP4CQ96CF2 AC006210.1-201ENST00000424882 111 ntBASIC0.28□□□□□ -2.36
CHMP4CQ96CF2 AC103810.7-201ENST00000607821 91 ntBASIC0.28□□□□□ -2.36
CHMP4CQ96CF2 uc_338.28-201ENST00000612082 187 ntBASIC0.28□□□□□ -2.36
CHMP4CQ96CF2 SNORA70.25-201ENST00000612741 95 ntBASIC0.28□□□□□ -2.36
CHMP4CQ96CF2 MIR4315-1-201ENST00000636800 73 ntBASIC0.28□□□□□ -2.36
CHMP4CQ96CF2 MIR4315-2-201ENST00000640925 73 ntBASIC0.28□□□□□ -2.36
CHMP4CQ96CF2 Y_RNA.283-201ENST00000364798 112 ntBASIC0.27□□□□□ -2.37
CHMP4CQ96CF2 SNORA51.5-201ENST00000384126 131 ntBASIC0.27□□□□□ -2.37
CHMP4CQ96CF2 RNU6-106P-201ENST00000384405 107 ntBASIC0.27□□□□□ -2.37
CHMP4CQ96CF2 AL513043.2-201ENST00000573941 143 ntBASIC0.27□□□□□ -2.37
CHMP4CQ96CF2 RNU1-29P-201ENST00000606574 126 ntBASIC0.27□□□□□ -2.37
CHMP4CQ96CF2 AC012531.4-201ENST00000616509 177 ntBASIC0.27□□□□□ -2.37
CHMP4CQ96CF2 RNA5SP257-201ENST00000363023 116 ntBASIC0.26□□□□□ -2.37
CHMP4CQ96CF2 RNA5SP63-201ENST00000391225 112 ntBASIC0.26□□□□□ -2.37
CHMP4CQ96CF2 SNORD110-201ENST00000408189 75 ntBASIC0.26□□□□□ -2.37
CHMP4CQ96CF2 RNA5SP484-201ENST00000458857 111 ntBASIC0.26□□□□□ -2.37
CHMP4CQ96CF2 MIR2113-201ENST00000459007 91 ntBASIC0.26□□□□□ -2.37
CHMP4CQ96CF2 NAMPTP3-201ENST00000569273 224 ntBASIC0.26□□□□□ -2.37
CHMP4CQ96CF2 MIR4777-201ENST00000583710 86 ntBASIC0.26□□□□□ -2.37
CHMP4CQ96CF2 RNU6-1325P-201ENST00000364905 105 ntBASIC0.25□□□□□ -2.37
CHMP4CQ96CF2 Y_RNA.374-201ENST00000365606 101 ntBASIC0.25□□□□□ -2.37
CHMP4CQ96CF2 RNU6-644P-201ENST00000391155 98 ntBASIC0.25□□□□□ -2.37
CHMP4CQ96CF2 RNU6-287P-201ENST00000516230 98 ntBASIC0.25□□□□□ -2.37
CHMP4CQ96CF2 RNU6-65P-201ENST00000516332 98 ntBASIC0.25□□□□□ -2.37
CHMP4CQ96CF2 Y_RNA.705-201ENST00000516862 110 ntBASIC0.25□□□□□ -2.37
CHMP4CQ96CF2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.25□□□□□ -2.37
CHMP4CQ96CF2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.25□□□□□ -2.37
CHMP4CQ96CF2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.25□□□□□ -2.37
CHMP4CQ96CF2 RNU6-756P-201ENST00000383997 107 ntBASIC0.24□□□□□ -2.37
CHMP4CQ96CF2 SNORD101-201ENST00000384027 73 ntBASIC0.24□□□□□ -2.37
CHMP4CQ96CF2 MIR590-201ENST00000385008 97 ntBASIC0.24□□□□□ -2.37
CHMP4CQ96CF2 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.24□□□□□ -2.37
CHMP4CQ96CF2 Y_RNA.681-201ENST00000516445 113 ntBASIC0.24□□□□□ -2.37
CHMP4CQ96CF2 RNU6-1057P-201ENST00000517162 102 ntBASIC0.24□□□□□ -2.37
CHMP4CQ96CF2 MIR548AG2-201ENST00000581228 64 ntBASIC0.24□□□□□ -2.37
CHMP4CQ96CF2 MIR548Z-201ENST00000584743 97 ntBASIC0.24□□□□□ -2.37
CHMP4CQ96CF2 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
CHMP4CQ96CF2 MIR6718-201ENST00000616153 80 ntBASIC0.24□□□□□ -2.37
CHMP4CQ96CF2 Y_RNA.30-201ENST00000362572 97 ntBASIC0.23□□□□□ -2.37
CHMP4CQ96CF2 MIR519E-201ENST00000385075 84 ntBASIC0.23□□□□□ -2.37
CHMP4CQ96CF2 RNU6-1290P-201ENST00000362957 109 ntBASIC0.22□□□□□ -2.37
CHMP4CQ96CF2 Y_RNA.207-201ENST00000364142 106 ntBASIC0.22□□□□□ -2.37
CHMP4CQ96CF2 RNU6-972P-201ENST00000391208 107 ntBASIC0.22□□□□□ -2.37
CHMP4CQ96CF2 MIR4536-1-201ENST00000583537 88 ntBASIC0.22□□□□□ -2.37
CHMP4CQ96CF2 MIR2909-201ENST00000617113 69 ntBASIC0.22□□□□□ -2.37
CHMP4CQ96CF2 Y_RNA.818-201ENST00000618813 71 ntBASIC0.22□□□□□ -2.37
CHMP4CQ96CF2 Y_RNA.107-201ENST00000363190 121 ntBASIC0.21□□□□□ -2.38
CHMP4CQ96CF2 RNU1-141P-201ENST00000364623 158 ntBASIC0.21□□□□□ -2.38
CHMP4CQ96CF2 RNU6-1232P-201ENST00000516299 86 ntBASIC0.21□□□□□ -2.38
CHMP4CQ96CF2 MIR499B-201ENST00000636498 73 ntBASIC0.21□□□□□ -2.38
CHMP4CQ96CF2 RNU6-664P-201ENST00000362381 107 ntBASIC0.2□□□□□ -2.38
CHMP4CQ96CF2 RNU6-766P-201ENST00000362478 107 ntBASIC0.2□□□□□ -2.38
CHMP4CQ96CF2 RNU6-127P-201ENST00000390897 107 ntBASIC0.2□□□□□ -2.38
CHMP4CQ96CF2 AL031737.1-201ENST00000450125 223 ntBASIC0.2□□□□□ -2.38
CHMP4CQ96CF2 MTRNR2L2-201ENST00000604882 87 ntBASIC0.2□□□□□ -2.38
CHMP4CQ96CF2 RNU6-887P-201ENST00000410660 100 ntBASIC0.19□□□□□ -2.38
CHMP4CQ96CF2 MIR4696-201ENST00000581431 70 ntBASIC0.19□□□□□ -2.38
CHMP4CQ96CF2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.19□□□□□ -2.38
CHMP4CQ96CF2 Y_RNA.291-201ENST00000364886 113 ntBASIC0.18□□□□□ -2.38
CHMP4CQ96CF2 MIR501-201ENST00000390204 84 ntBASIC0.18□□□□□ -2.38
CHMP4CQ96CF2 RNY4P18-201ENST00000391107 89 ntBASIC0.18□□□□□ -2.38
CHMP4CQ96CF2 MIR1295A-201ENST00000408463 79 ntBASIC0.18□□□□□ -2.38
CHMP4CQ96CF2 MIR4460-201ENST00000577862 86 ntBASIC0.18□□□□□ -2.38
CHMP4CQ96CF2 Y_RNA.239-201ENST00000364444 113 ntBASIC0.17□□□□□ -2.38
CHMP4CQ96CF2 RNU6-935P-201ENST00000410371 100 ntBASIC0.17□□□□□ -2.38
CHMP4CQ96CF2 RNU6-537P-201ENST00000517277 103 ntBASIC0.17□□□□□ -2.38
CHMP4CQ96CF2 Y_RNA.93-201ENST00000363066 109 ntBASIC0.16□□□□□ -2.38
CHMP4CQ96CF2 SNORA42.1-201ENST00000363515 137 ntBASIC0.16□□□□□ -2.38
CHMP4CQ96CF2 RNU6-652P-201ENST00000365488 107 ntBASIC0.16□□□□□ -2.38
CHMP4CQ96CF2 Y_RNA.544-201ENST00000384650 113 ntBASIC0.16□□□□□ -2.38
CHMP4CQ96CF2 MIR610-201ENST00000385139 96 ntBASIC0.16□□□□□ -2.38
CHMP4CQ96CF2 MIR643-201ENST00000385267 97 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms