Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 Y_RNA.697-201ENST00000516776 113 ntBASIC1.48□□□□□ -2.17
DDX1Q92499 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.48□□□□□ -2.17
DDX1Q92499 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
DDX1Q92499 Y_RNA.207-201ENST00000364142 106 ntBASIC1.47□□□□□ -2.17
DDX1Q92499 SNORA24B-201ENST00000384176 131 ntBASIC1.47□□□□□ -2.17
DDX1Q92499 MIR942-201ENST00000401111 86 ntBASIC1.47□□□□□ -2.17
DDX1Q92499 AC002429.1-201ENST00000437672 148 ntBASIC1.47□□□□□ -2.17
DDX1Q92499 AC097635.1-201ENST00000450678 155 ntBASIC1.47□□□□□ -2.17
DDX1Q92499 MIR2113-201ENST00000459007 91 ntBASIC1.47□□□□□ -2.17
DDX1Q92499 AC023827.1-201ENST00000569247 97 ntBASIC1.47□□□□□ -2.17
DDX1Q92499 AC106800.4-201ENST00000614905 153 ntBASIC1.47□□□□□ -2.17
DDX1Q92499 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
DDX1Q92499 RNU6-330P-201ENST00000363015 107 ntBASIC1.46□□□□□ -2.18
DDX1Q92499 RNU6-340P-201ENST00000364005 107 ntBASIC1.46□□□□□ -2.18
DDX1Q92499 Y_RNA.205-201ENST00000364128 113 ntBASIC1.46□□□□□ -2.18
DDX1Q92499 RNA5SP245-201ENST00000364239 121 ntBASIC1.46□□□□□ -2.18
DDX1Q92499 Y_RNA.606-201ENST00000410579 103 ntBASIC1.46□□□□□ -2.18
DDX1Q92499 Y_RNA.681-201ENST00000516445 113 ntBASIC1.46□□□□□ -2.18
DDX1Q92499 AC068338.1-201ENST00000565567 176 ntBASIC1.46□□□□□ -2.18
DDX1Q92499 MIR3140-201ENST00000583685 90 ntBASIC1.46□□□□□ -2.18
DDX1Q92499 MIR6788-201ENST00000618842 66 ntBASIC1.46□□□□□ -2.18
DDX1Q92499 Y_RNA.239-201ENST00000364444 113 ntBASIC1.45□□□□□ -2.18
DDX1Q92499 RNU1-93P-201ENST00000364704 169 ntBASIC1.45□□□□□ -2.18
DDX1Q92499 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
DDX1Q92499 SNORD101-201ENST00000384027 73 ntBASIC1.45□□□□□ -2.18
DDX1Q92499 RNU6-540P-201ENST00000384622 101 ntBASIC1.45□□□□□ -2.18
DDX1Q92499 RNU6-291P-201ENST00000384720 107 ntBASIC1.45□□□□□ -2.18
DDX1Q92499 RNU6-587P-201ENST00000391282 106 ntBASIC1.45□□□□□ -2.18
DDX1Q92499 MIR1265-201ENST00000408444 86 ntBASIC1.45□□□□□ -2.18
DDX1Q92499 RPS26P5-201ENST00000418544 335 ntBASIC1.45□□□□□ -2.18
DDX1Q92499 RNU6-871P-201ENST00000516122 100 ntBASIC1.45□□□□□ -2.18
DDX1Q92499 AC027335.2-201ENST00000624030 375 ntBASIC1.45□□□□□ -2.18
DDX1Q92499 RNU6-154P-201ENST00000384306 106 ntBASIC1.44□□□□□ -2.18
DDX1Q92499 RNU7-156P-201ENST00000517214 74 ntBASIC1.44□□□□□ -2.18
DDX1Q92499 AC138907.6-201ENST00000568401 126 ntBASIC1.44□□□□□ -2.18
DDX1Q92499 AC138869.1-201ENST00000568623 124 ntBASIC1.44□□□□□ -2.18
DDX1Q92499 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
DDX1Q92499 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.44□□□□□ -2.18
DDX1Q92499 MIR758-201ENST00000390227 88 ntBASIC1.43□□□□□ -2.18
DDX1Q92499 Y_RNA.596-201ENST00000410462 109 ntBASIC1.43□□□□□ -2.18
DDX1Q92499 RNU6-994P-201ENST00000410507 111 ntBASIC1.43□□□□□ -2.18
DDX1Q92499 RNU7-40P-201ENST00000516397 64 ntBASIC1.43□□□□□ -2.18
DDX1Q92499 MIR4676-201ENST00000583078 72 ntBASIC1.43□□□□□ -2.18
DDX1Q92499 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.43□□□□□ -2.18
DDX1Q92499 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
DDX1Q92499 SNORD115-31-201ENST00000365318 82 ntBASIC1.42□□□□□ -2.18
DDX1Q92499 MIR599-201ENST00000385069 95 ntBASIC1.42□□□□□ -2.18
DDX1Q92499 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
DDX1Q92499 RNU2-59P-201ENST00000410482 191 ntBASIC1.42□□□□□ -2.18
DDX1Q92499 AC244505.6-201ENST00000452829 130 ntBASIC1.42□□□□□ -2.18
DDX1Q92499 MIR4771-2-201ENST00000577758 74 ntBASIC1.42□□□□□ -2.18
DDX1Q92499 MIR4771-1-201ENST00000582617 74 ntBASIC1.42□□□□□ -2.18
DDX1Q92499 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
DDX1Q92499 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
DDX1Q92499 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
DDX1Q92499 MIR96-201ENST00000362288 78 ntBASIC1.41□□□□□ -2.18
DDX1Q92499 RNU6-1241P-201ENST00000384536 107 ntBASIC1.41□□□□□ -2.18
DDX1Q92499 RNY4P3-201ENST00000365254 95 ntBASIC1.4□□□□□ -2.19
DDX1Q92499 MIR520E-201ENST00000384867 87 ntBASIC1.4□□□□□ -2.19
DDX1Q92499 MIR618-201ENST00000385287 98 ntBASIC1.4□□□□□ -2.19
DDX1Q92499 RNU6-935P-201ENST00000410371 100 ntBASIC1.4□□□□□ -2.19
DDX1Q92499 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
DDX1Q92499 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.4□□□□□ -2.19
DDX1Q92499 AC067940.1-201ENST00000458411 300 ntBASIC1.4□□□□□ -2.19
DDX1Q92499 RNU7-56P-201ENST00000458744 62 ntBASIC1.4□□□□□ -2.19
DDX1Q92499 RPS29P1-201ENST00000465274 159 ntBASIC1.4□□□□□ -2.19
DDX1Q92499 AC097510.1-201ENST00000510945 133 ntBASIC1.4□□□□□ -2.19
DDX1Q92499 AC008608.1-201ENST00000603910 127 ntBASIC1.4□□□□□ -2.19
DDX1Q92499 U6.81-201ENST00000612550 106 ntBASIC1.4□□□□□ -2.19
DDX1Q92499 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
DDX1Q92499 RNU6-824P-201ENST00000363724 104 ntBASIC1.39□□□□□ -2.19
DDX1Q92499 MIR19B1-201ENST00000384829 87 ntBASIC1.39□□□□□ -2.19
DDX1Q92499 RNA5SP404-201ENST00000517118 132 ntBASIC1.39□□□□□ -2.19
DDX1Q92499 MIR4804-201ENST00000581683 73 ntBASIC1.39□□□□□ -2.19
DDX1Q92499 MIR3660-201ENST00000584845 100 ntBASIC1.39□□□□□ -2.19
DDX1Q92499 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
DDX1Q92499 Y_RNA.371-201ENST00000365591 113 ntBASIC1.38□□□□□ -2.19
DDX1Q92499 RNU6-535P-201ENST00000384722 107 ntBASIC1.38□□□□□ -2.19
DDX1Q92499 RNU7-102P-201ENST00000458948 62 ntBASIC1.38□□□□□ -2.19
DDX1Q92499 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
DDX1Q92499 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
DDX1Q92499 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
DDX1Q92499 RNU6-649P-201ENST00000384463 107 ntBASIC1.37□□□□□ -2.19
DDX1Q92499 MIR200A-201ENST00000384875 90 ntBASIC1.37□□□□□ -2.19
DDX1Q92499 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
DDX1Q92499 MIR938-201ENST00000401216 83 ntBASIC1.37□□□□□ -2.19
DDX1Q92499 MIR548J-201ENST00000408833 112 ntBASIC1.37□□□□□ -2.19
DDX1Q92499 FABP5P4-201ENST00000437203 171 ntBASIC1.37□□□□□ -2.19
DDX1Q92499 MIR1-1-201ENST00000362147 71 ntBASIC1.36□□□□□ -2.19
DDX1Q92499 SNORA8.1-201ENST00000384250 140 ntBASIC1.36□□□□□ -2.19
DDX1Q92499 MIR451A-201ENST00000385059 72 ntBASIC1.36□□□□□ -2.19
DDX1Q92499 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
DDX1Q92499 SNORA40.6-201ENST00000391153 128 ntBASIC1.36□□□□□ -2.19
DDX1Q92499 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.36□□□□□ -2.19
DDX1Q92499 RNU6-287P-201ENST00000516230 98 ntBASIC1.36□□□□□ -2.19
DDX1Q92499 U6.111-201ENST00000636093 83 ntBASIC1.36□□□□□ -2.19
DDX1Q92499 RNU1-124P-201ENST00000363861 145 ntBASIC1.35□□□□□ -2.19
DDX1Q92499 Y_RNA.258-201ENST00000364613 105 ntBASIC1.35□□□□□ -2.19
DDX1Q92499 RNU6-800P-201ENST00000384473 103 ntBASIC1.35□□□□□ -2.19
DDX1Q92499 RNU6-939P-201ENST00000384634 107 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 245.8 ms