Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
PTCD2Q8WV60 RNU6-910P-201ENST00000390844 107 ntBASIC2.28□□□□□ -2.04
PTCD2Q8WV60 MIR548L-201ENST00000408303 86 ntBASIC2.28□□□□□ -2.04
PTCD2Q8WV60 snoU13.23-201ENST00000458863 104 ntBASIC2.28□□□□□ -2.04
PTCD2Q8WV60 MIR4460-201ENST00000577862 86 ntBASIC2.28□□□□□ -2.04
PTCD2Q8WV60 AP000553.5-201ENST00000641933 54 ntBASIC2.28□□□□□ -2.04
PTCD2Q8WV60 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.27□□□□□ -2.05
PTCD2Q8WV60 SNORD60.1-201ENST00000362451 73 ntBASIC2.27□□□□□ -2.05
PTCD2Q8WV60 RNU6-482P-201ENST00000391068 107 ntBASIC2.27□□□□□ -2.05
PTCD2Q8WV60 SNORA75.1-201ENST00000391130 148 ntBASIC2.27□□□□□ -2.05
PTCD2Q8WV60 RN7SKP223-201ENST00000410582 62 ntBASIC2.27□□□□□ -2.05
PTCD2Q8WV60 AC018659.1-201ENST00000551083 169 ntBASIC2.27□□□□□ -2.05
PTCD2Q8WV60 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PTCD2Q8WV60 SNORD114-4-201ENST00000363962 75 ntBASIC2.26□□□□□ -2.05
PTCD2Q8WV60 MIR630-201ENST00000384957 97 ntBASIC2.26□□□□□ -2.05
PTCD2Q8WV60 SNORA48.3-201ENST00000391081 134 ntBASIC2.26□□□□□ -2.05
PTCD2Q8WV60 AL356320.1-201ENST00000429616 163 ntBASIC2.26□□□□□ -2.05
PTCD2Q8WV60 AC025033.1-201ENST00000463883 194 ntBASIC2.26□□□□□ -2.05
PTCD2Q8WV60 AC104435.1-201ENST00000483483 166 ntBASIC2.25□□□□□ -2.05
PTCD2Q8WV60 RNA5SP200-201ENST00000516360 103 ntBASIC2.25□□□□□ -2.05
PTCD2Q8WV60 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PTCD2Q8WV60 Y_RNA.250-201ENST00000364542 110 ntBASIC2.24□□□□□ -2.05
PTCD2Q8WV60 MIR221-201ENST00000385135 110 ntBASIC2.24□□□□□ -2.05
PTCD2Q8WV60 MT-TY-201ENST00000387409 66 ntBASIC2.24□□□□□ -2.05
PTCD2Q8WV60 RNU6-135P-201ENST00000516769 101 ntBASIC2.24□□□□□ -2.05
PTCD2Q8WV60 RNU1-40P-201ENST00000516816 164 ntBASIC2.24□□□□□ -2.05
PTCD2Q8WV60 RNU1-97P-201ENST00000516872 164 ntBASIC2.24□□□□□ -2.05
PTCD2Q8WV60 MIR6132-201ENST00000622083 109 ntBASIC2.24□□□□□ -2.05
PTCD2Q8WV60 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
PTCD2Q8WV60 MIR17-201ENST00000385012 84 ntBASIC2.23□□□□□ -2.05
PTCD2Q8WV60 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PTCD2Q8WV60 RNU6-469P-201ENST00000516253 101 ntBASIC2.23□□□□□ -2.05
PTCD2Q8WV60 SNORA40.17-201ENST00000517256 115 ntBASIC2.23□□□□□ -2.05
PTCD2Q8WV60 MIR4648-201ENST00000580107 72 ntBASIC2.23□□□□□ -2.05
PTCD2Q8WV60 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.23□□□□□ -2.05
PTCD2Q8WV60 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.23□□□□□ -2.05
PTCD2Q8WV60 MIR4448-201ENST00000584360 86 ntBASIC2.23□□□□□ -2.05
PTCD2Q8WV60 MIR644A-201ENST00000385262 94 ntBASIC2.22□□□□□ -2.05
PTCD2Q8WV60 SNORD113-2-201ENST00000391082 72 ntBASIC2.22□□□□□ -2.05
PTCD2Q8WV60 RNU1-78P-201ENST00000391248 165 ntBASIC2.22□□□□□ -2.05
PTCD2Q8WV60 AL157398.1-201ENST00000452981 186 ntBASIC2.22□□□□□ -2.05
PTCD2Q8WV60 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PTCD2Q8WV60 SNORA7.1-201ENST00000363750 139 ntBASIC2.21□□□□□ -2.06
PTCD2Q8WV60 MIR1827-201ENST00000408549 66 ntBASIC2.21□□□□□ -2.06
PTCD2Q8WV60 AC108210.2-201ENST00000503681 201 ntBASIC2.21□□□□□ -2.06
PTCD2Q8WV60 SNORD79.1-201ENST00000516069 84 ntBASIC2.21□□□□□ -2.06
PTCD2Q8WV60 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.21□□□□□ -2.06
PTCD2Q8WV60 MIR3198-2-201ENST00000577868 80 ntBASIC2.21□□□□□ -2.06
PTCD2Q8WV60 RMST_2.1-201ENST00000617263 136 ntBASIC2.21□□□□□ -2.06
PTCD2Q8WV60 RNU6-1312P-201ENST00000362425 108 ntBASIC2.2□□□□□ -2.06
PTCD2Q8WV60 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
PTCD2Q8WV60 RNU4-52P-201ENST00000384209 138 ntBASIC2.2□□□□□ -2.06
PTCD2Q8WV60 SNORA64-201ENST00000384674 134 ntBASIC2.2□□□□□ -2.06
PTCD2Q8WV60 MIR521-2-201ENST00000384818 87 ntBASIC2.2□□□□□ -2.06
PTCD2Q8WV60 SNORD41.1-201ENST00000391000 69 ntBASIC2.2□□□□□ -2.06
PTCD2Q8WV60 MIR4422-201ENST00000581938 83 ntBASIC2.2□□□□□ -2.06
PTCD2Q8WV60 MIR4639-201ENST00000584938 69 ntBASIC2.2□□□□□ -2.06
PTCD2Q8WV60 AC244669.1-204ENST00000621564 178 ntBASIC2.2□□□□□ -2.06
PTCD2Q8WV60 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PTCD2Q8WV60 MIR517B-201ENST00000385102 67 ntBASIC2.19□□□□□ -2.06
PTCD2Q8WV60 AC002350.1-201ENST00000490759 375 ntBASIC2.19□□□□□ -2.06
PTCD2Q8WV60 AC015712.3-201ENST00000559380 164 ntBASIC2.19□□□□□ -2.06
PTCD2Q8WV60 MIR1273D-201ENST00000577266 86 ntBASIC2.19□□□□□ -2.06
PTCD2Q8WV60 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.19□□□□□ -2.06
PTCD2Q8WV60 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.18□□□□□ -2.06
PTCD2Q8WV60 HMGN2P19-201ENST00000425149 265 ntBASIC2.18□□□□□ -2.06
PTCD2Q8WV60 snoU13.13-201ENST00000458842 104 ntBASIC2.18□□□□□ -2.06
PTCD2Q8WV60 RNU6-902P-201ENST00000517212 91 ntBASIC2.18□□□□□ -2.06
PTCD2Q8WV60 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.18□□□□□ -2.06
PTCD2Q8WV60 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PTCD2Q8WV60 SNORD28-201ENST00000384706 75 ntBASIC2.17□□□□□ -2.06
PTCD2Q8WV60 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PTCD2Q8WV60 Y_RNA.676-201ENST00000516393 96 ntBASIC2.17□□□□□ -2.06
PTCD2Q8WV60 MIR5002-201ENST00000584713 97 ntBASIC2.17□□□□□ -2.06
PTCD2Q8WV60 MIR4781-201ENST00000585250 76 ntBASIC2.17□□□□□ -2.06
PTCD2Q8WV60 MIR6873-201ENST00000622788 63 ntBASIC2.17□□□□□ -2.06
PTCD2Q8WV60 SNORA70.22-201ENST00000517160 124 ntBASIC2.16□□□□□ -2.06
PTCD2Q8WV60 RNU1-141P-201ENST00000364623 158 ntBASIC2.15□□□□□ -2.07
PTCD2Q8WV60 RNA5SP338-201ENST00000410495 85 ntBASIC2.15□□□□□ -2.07
PTCD2Q8WV60 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.15□□□□□ -2.07
PTCD2Q8WV60 RNU6-520P-201ENST00000384717 104 ntBASIC2.14□□□□□ -2.07
PTCD2Q8WV60 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.14□□□□□ -2.07
PTCD2Q8WV60 RNU5B-6P-201ENST00000516765 68 ntBASIC2.14□□□□□ -2.07
PTCD2Q8WV60 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PTCD2Q8WV60 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PTCD2Q8WV60 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PTCD2Q8WV60 RNU6-698P-201ENST00000363523 107 ntBASIC2.13□□□□□ -2.07
PTCD2Q8WV60 RNU6-34P-201ENST00000364874 107 ntBASIC2.13□□□□□ -2.07
PTCD2Q8WV60 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.13□□□□□ -2.07
PTCD2Q8WV60 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PTCD2Q8WV60 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PTCD2Q8WV60 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PTCD2Q8WV60 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PTCD2Q8WV60 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PTCD2Q8WV60 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.12□□□□□ -2.07
PTCD2Q8WV60 AL591806.2-201ENST00000433122 173 ntBASIC2.12□□□□□ -2.07
PTCD2Q8WV60 AC021146.9-201ENST00000512503 156 ntBASIC2.12□□□□□ -2.07
PTCD2Q8WV60 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.12□□□□□ -2.07
PTCD2Q8WV60 uc_338.10-201ENST00000621872 182 ntBASIC2.12□□□□□ -2.07
PTCD2Q8WV60 RNU6-726P-201ENST00000364680 107 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms