Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 AC015712.3-201ENST00000559380 164 ntBASIC2.36□□□□□ -2.03
EFCAB3Q8N7B9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
EFCAB3Q8N7B9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
EFCAB3Q8N7B9 RNU6-1162P-201ENST00000384443 104 ntBASIC2.35□□□□□ -2.03
EFCAB3Q8N7B9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.35□□□□□ -2.03
EFCAB3Q8N7B9 AL591806.2-201ENST00000433122 173 ntBASIC2.35□□□□□ -2.03
EFCAB3Q8N7B9 AC002350.1-201ENST00000490759 375 ntBASIC2.35□□□□□ -2.03
EFCAB3Q8N7B9 AC018659.1-201ENST00000551083 169 ntBASIC2.35□□□□□ -2.03
EFCAB3Q8N7B9 MIR4460-201ENST00000577862 86 ntBASIC2.35□□□□□ -2.03
EFCAB3Q8N7B9 RNA5SP289-201ENST00000362332 137 ntBASIC2.34□□□□□ -2.03
EFCAB3Q8N7B9 RNU6-990P-201ENST00000364385 104 ntBASIC2.34□□□□□ -2.03
EFCAB3Q8N7B9 RNU6-902P-201ENST00000517212 91 ntBASIC2.34□□□□□ -2.03
EFCAB3Q8N7B9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
EFCAB3Q8N7B9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
EFCAB3Q8N7B9 RNA5SP456-201ENST00000364002 114 ntBASIC2.33□□□□□ -2.04
EFCAB3Q8N7B9 SNORD114-30-201ENST00000364448 72 ntBASIC2.33□□□□□ -2.04
EFCAB3Q8N7B9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
EFCAB3Q8N7B9 AC008834.1-201ENST00000511612 175 ntBASIC2.33□□□□□ -2.04
EFCAB3Q8N7B9 RNU6-469P-201ENST00000516253 101 ntBASIC2.33□□□□□ -2.04
EFCAB3Q8N7B9 SNORA7.1-201ENST00000363750 139 ntBASIC2.32□□□□□ -2.04
EFCAB3Q8N7B9 RNU6-936P-201ENST00000384005 107 ntBASIC2.32□□□□□ -2.04
EFCAB3Q8N7B9 SNORD12-201ENST00000391002 90 ntBASIC2.32□□□□□ -2.04
EFCAB3Q8N7B9 RN7SKP223-201ENST00000410582 62 ntBASIC2.32□□□□□ -2.04
EFCAB3Q8N7B9 HMGN2P19-201ENST00000425149 265 ntBASIC2.32□□□□□ -2.04
EFCAB3Q8N7B9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.32□□□□□ -2.04
EFCAB3Q8N7B9 RNU6-548P-201ENST00000517083 115 ntBASIC2.32□□□□□ -2.04
EFCAB3Q8N7B9 MIR4781-201ENST00000585250 76 ntBASIC2.32□□□□□ -2.04
EFCAB3Q8N7B9 AC244669.1-204ENST00000621564 178 ntBASIC2.32□□□□□ -2.04
EFCAB3Q8N7B9 SNORD28-201ENST00000384706 75 ntBASIC2.31□□□□□ -2.04
EFCAB3Q8N7B9 MIR644A-201ENST00000385262 94 ntBASIC2.31□□□□□ -2.04
EFCAB3Q8N7B9 MIR548L-201ENST00000408303 86 ntBASIC2.31□□□□□ -2.04
EFCAB3Q8N7B9 AC025033.1-201ENST00000463883 194 ntBASIC2.31□□□□□ -2.04
EFCAB3Q8N7B9 RNU1-40P-201ENST00000516816 164 ntBASIC2.31□□□□□ -2.04
EFCAB3Q8N7B9 RNU1-97P-201ENST00000516872 164 ntBASIC2.31□□□□□ -2.04
EFCAB3Q8N7B9 MIR548V-201ENST00000584165 80 ntBASIC2.31□□□□□ -2.04
EFCAB3Q8N7B9 MIR6873-201ENST00000622788 63 ntBASIC2.31□□□□□ -2.04
EFCAB3Q8N7B9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
EFCAB3Q8N7B9 SNORD60.1-201ENST00000362451 73 ntBASIC2.3□□□□□ -2.04
EFCAB3Q8N7B9 MIR521-2-201ENST00000384818 87 ntBASIC2.3□□□□□ -2.04
EFCAB3Q8N7B9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.3□□□□□ -2.04
EFCAB3Q8N7B9 SNORA70.22-201ENST00000517160 124 ntBASIC2.3□□□□□ -2.04
EFCAB3Q8N7B9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
EFCAB3Q8N7B9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
EFCAB3Q8N7B9 RNU6-1184P-201ENST00000384588 108 ntBASIC2.29□□□□□ -2.04
EFCAB3Q8N7B9 MIR1289-2-201ENST00000408360 111 ntBASIC2.29□□□□□ -2.04
EFCAB3Q8N7B9 MIR1273D-201ENST00000577266 86 ntBASIC2.29□□□□□ -2.04
EFCAB3Q8N7B9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
EFCAB3Q8N7B9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
EFCAB3Q8N7B9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
EFCAB3Q8N7B9 SNORD113-4-201ENST00000364802 75 ntBASIC2.28□□□□□ -2.04
EFCAB3Q8N7B9 AL356379.1-201ENST00000414105 126 ntBASIC2.28□□□□□ -2.04
EFCAB3Q8N7B9 AC079804.2-201ENST00000490376 200 ntBASIC2.28□□□□□ -2.04
EFCAB3Q8N7B9 RNA5SP458-201ENST00000516188 119 ntBASIC2.28□□□□□ -2.04
EFCAB3Q8N7B9 RNA5SP82-201ENST00000516707 92 ntBASIC2.28□□□□□ -2.04
EFCAB3Q8N7B9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.28□□□□□ -2.04
EFCAB3Q8N7B9 RNU1-141P-201ENST00000364623 158 ntBASIC2.27□□□□□ -2.05
EFCAB3Q8N7B9 AL157398.1-201ENST00000452981 186 ntBASIC2.27□□□□□ -2.05
EFCAB3Q8N7B9 AL353997.5-201ENST00000618886 171 ntBASIC2.27□□□□□ -2.05
EFCAB3Q8N7B9 SNORA75.1-201ENST00000391130 148 ntBASIC2.26□□□□□ -2.05
EFCAB3Q8N7B9 AC026436.1-201ENST00000510537 270 ntBASIC2.26□□□□□ -2.05
EFCAB3Q8N7B9 MIR1291-201ENST00000627649 87 ntBASIC2.26□□□□□ -2.05
EFCAB3Q8N7B9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
EFCAB3Q8N7B9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.25□□□□□ -2.05
EFCAB3Q8N7B9 RNA5SP99-201ENST00000364020 114 ntBASIC2.25□□□□□ -2.05
EFCAB3Q8N7B9 RNU6-726P-201ENST00000364680 107 ntBASIC2.25□□□□□ -2.05
EFCAB3Q8N7B9 MIR548C-201ENST00000384815 97 ntBASIC2.25□□□□□ -2.05
EFCAB3Q8N7B9 MIR764-201ENST00000390811 85 ntBASIC2.25□□□□□ -2.05
EFCAB3Q8N7B9 AL096840.1-201ENST00000603287 93 ntBASIC2.25□□□□□ -2.05
EFCAB3Q8N7B9 SNORD114-1-201ENST00000362705 72 ntBASIC2.24□□□□□ -2.05
EFCAB3Q8N7B9 MIR630-201ENST00000384957 97 ntBASIC2.24□□□□□ -2.05
EFCAB3Q8N7B9 SNORD113-2-201ENST00000391082 72 ntBASIC2.24□□□□□ -2.05
EFCAB3Q8N7B9 AC104435.1-201ENST00000483483 166 ntBASIC2.24□□□□□ -2.05
EFCAB3Q8N7B9 MIR144-201ENST00000384886 86 ntBASIC2.23□□□□□ -2.05
EFCAB3Q8N7B9 AC046143.2-201ENST00000609789 160 ntBASIC2.23□□□□□ -2.05
EFCAB3Q8N7B9 AP000553.5-201ENST00000641933 54 ntBASIC2.23□□□□□ -2.05
EFCAB3Q8N7B9 MIRLET7G-201ENST00000362280 84 ntBASIC2.22□□□□□ -2.05
EFCAB3Q8N7B9 MIR517B-201ENST00000385102 67 ntBASIC2.22□□□□□ -2.05
EFCAB3Q8N7B9 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.22□□□□□ -2.05
EFCAB3Q8N7B9 RNA5SP247-201ENST00000411181 105 ntBASIC2.22□□□□□ -2.05
EFCAB3Q8N7B9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.22□□□□□ -2.05
EFCAB3Q8N7B9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
EFCAB3Q8N7B9 SNORA8.2-201ENST00000384372 139 ntBASIC2.21□□□□□ -2.06
EFCAB3Q8N7B9 RNA5SP489-201ENST00000410986 109 ntBASIC2.21□□□□□ -2.06
EFCAB3Q8N7B9 AL603825.1-201ENST00000438481 80 ntBASIC2.21□□□□□ -2.06
EFCAB3Q8N7B9 RNU6-1110P-201ENST00000516462 101 ntBASIC2.21□□□□□ -2.06
EFCAB3Q8N7B9 RNA5SP47-201ENST00000517230 109 ntBASIC2.21□□□□□ -2.06
EFCAB3Q8N7B9 MIR6895-201ENST00000613497 78 ntBASIC2.21□□□□□ -2.06
EFCAB3Q8N7B9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
EFCAB3Q8N7B9 RNU6-698P-201ENST00000363523 107 ntBASIC2.2□□□□□ -2.06
EFCAB3Q8N7B9 RNU6-34P-201ENST00000364874 107 ntBASIC2.2□□□□□ -2.06
EFCAB3Q8N7B9 SNORA15B-2-201ENST00000384058 135 ntBASIC2.2□□□□□ -2.06
EFCAB3Q8N7B9 SNORA15B-1-201ENST00000384334 135 ntBASIC2.2□□□□□ -2.06
EFCAB3Q8N7B9 SNORD18A-201ENST00000363753 72 ntBASIC2.19□□□□□ -2.06
EFCAB3Q8N7B9 MIR676-201ENST00000390702 67 ntBASIC2.19□□□□□ -2.06
EFCAB3Q8N7B9 RNA5SP338-201ENST00000410495 85 ntBASIC2.19□□□□□ -2.06
EFCAB3Q8N7B9 AC002429.1-201ENST00000437672 148 ntBASIC2.19□□□□□ -2.06
EFCAB3Q8N7B9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.19□□□□□ -2.06
EFCAB3Q8N7B9 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.19□□□□□ -2.06
EFCAB3Q8N7B9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
EFCAB3Q8N7B9 Y_RNA.338-201ENST00000365320 114 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 278 ms