Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 AC092794.1-201ENST00000612734 582 ntBASIC-4.13□□□□□ -3.07
LINC00643Q86TS7 U6.58-201ENST00000613107 107 ntBASIC-4.13□□□□□ -3.07
LINC00643Q86TS7 RNU6-1262P-201ENST00000516217 96 ntBASIC-4.14□□□□□ -3.07
LINC00643Q86TS7 RNU6-1314P-201ENST00000517139 104 ntBASIC-4.14□□□□□ -3.07
LINC00643Q86TS7 RNU6-232P-201ENST00000517144 64 ntBASIC-4.14□□□□□ -3.07
LINC00643Q86TS7 MIR3064-201ENST00000581130 66 ntBASIC-4.14□□□□□ -3.07
LINC00643Q86TS7 DLEU2_2.2-201ENST00000615474 90 ntBASIC-4.14□□□□□ -3.07
LINC00643Q86TS7 Y_RNA.153-201ENST00000363615 91 ntBASIC-4.15□□□□□ -3.07
LINC00643Q86TS7 SNORD50.2-201ENST00000365465 70 ntBASIC-4.15□□□□□ -3.07
LINC00643Q86TS7 RNU6-651P-201ENST00000411040 105 ntBASIC-4.15□□□□□ -3.07
LINC00643Q86TS7 RNU7-85P-201ENST00000458851 63 ntBASIC-4.15□□□□□ -3.07
LINC00643Q86TS7 RNU6-1281P-201ENST00000516223 105 ntBASIC-4.15□□□□□ -3.07
LINC00643Q86TS7 Y_RNA.482-201ENST00000384377 111 ntBASIC-4.16□□□□□ -3.08
LINC00643Q86TS7 SNORA26.8-201ENST00000391306 124 ntBASIC-4.16□□□□□ -3.08
LINC00643Q86TS7 RNU6-908P-201ENST00000410160 94 ntBASIC-4.16□□□□□ -3.08
LINC00643Q86TS7 MTND4LP30-201ENST00000454092 297 ntBASIC-4.16□□□□□ -3.08
LINC00643Q86TS7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-4.16□□□□□ -3.08
LINC00643Q86TS7 RNY4P20-201ENST00000516678 93 ntBASIC-4.16□□□□□ -3.08
LINC00643Q86TS7 MIR1255B1-201ENST00000636325 63 ntBASIC-4.16□□□□□ -3.08
LINC00643Q86TS7 RNU6-451P-201ENST00000362921 107 ntBASIC-4.17□□□□□ -3.08
LINC00643Q86TS7 SNORD113-8-201ENST00000363497 74 ntBASIC-4.17□□□□□ -3.08
LINC00643Q86TS7 RNY4P28-201ENST00000365281 93 ntBASIC-4.17□□□□□ -3.08
LINC00643Q86TS7 RNU6-211P-201ENST00000384047 107 ntBASIC-4.17□□□□□ -3.08
LINC00643Q86TS7 Y_RNA.53-201ENST00000362765 102 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 MIR548F5-201ENST00000408421 86 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 RNU7-125P-201ENST00000458760 62 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 U8.20-201ENST00000459445 131 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 RNU6-807P-201ENST00000516805 107 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 SCARNA24.2-201ENST00000516968 130 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 MIR3915-201ENST00000578518 97 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 AC104996.3-201ENST00000590718 94 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 AC025521.1-201ENST00000621624 286 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 RNU6-101P-201ENST00000410323 104 ntBASIC-4.19□□□□□ -3.08
LINC00643Q86TS7 MTND3P2-201ENST00000438452 342 ntBASIC-4.19□□□□□ -3.08
LINC00643Q86TS7 AC097484.2-201ENST00000509147 251 ntBASIC-4.19□□□□□ -3.08
LINC00643Q86TS7 U6.106-201ENST00000636360 105 ntBASIC-4.19□□□□□ -3.08
LINC00643Q86TS7 RNU4-90P-201ENST00000362773 141 ntBASIC-4.2□□□□□ -3.08
LINC00643Q86TS7 RNU6-832P-201ENST00000363319 107 ntBASIC-4.2□□□□□ -3.08
LINC00643Q86TS7 RNU6-1111P-201ENST00000391118 107 ntBASIC-4.2□□□□□ -3.08
LINC00643Q86TS7 RNU6-311P-201ENST00000516224 102 ntBASIC-4.2□□□□□ -3.08
LINC00643Q86TS7 SNORA25.1-201ENST00000362326 128 ntBASIC-4.21□□□□□ -3.08
LINC00643Q86TS7 RNU6-824P-201ENST00000363724 104 ntBASIC-4.21□□□□□ -3.08
LINC00643Q86TS7 MIR122-201ENST00000385044 85 ntBASIC-4.21□□□□□ -3.08
LINC00643Q86TS7 RNU6-62P-201ENST00000516526 102 ntBASIC-4.21□□□□□ -3.08
LINC00643Q86TS7 RPS29P30-201ENST00000600975 111 ntBASIC-4.21□□□□□ -3.08
LINC00643Q86TS7 Y_RNA.144-201ENST00000363521 113 ntBASIC-4.22□□□□□ -3.08
LINC00643Q86TS7 RNY3P3-201ENST00000363816 102 ntBASIC-4.22□□□□□ -3.08
LINC00643Q86TS7 RNU6-1148P-201ENST00000410992 104 ntBASIC-4.22□□□□□ -3.08
LINC00643Q86TS7 AL121914.1-201ENST00000450188 156 ntBASIC-4.22□□□□□ -3.08
LINC00643Q86TS7 RNU6-230P-201ENST00000362457 104 ntBASIC-4.23□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.39-201ENST00000362620 98 ntBASIC-4.23□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.228-201ENST00000364346 98 ntBASIC-4.23□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.602-201ENST00000410535 92 ntBASIC-4.23□□□□□ -3.09
LINC00643Q86TS7 RBMX2P4-201ENST00000441256 376 ntBASIC-4.23□□□□□ -3.09
LINC00643Q86TS7 RNA5SP93-201ENST00000362525 114 ntBASIC-4.24□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.394-201ENST00000383942 103 ntBASIC-4.24□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.513-201ENST00000384522 100 ntBASIC-4.24□□□□□ -3.09
LINC00643Q86TS7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-4.24□□□□□ -3.09
LINC00643Q86TS7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-4.24□□□□□ -3.09
LINC00643Q86TS7 MIR6863-201ENST00000636112 90 ntBASIC-4.24□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.82-201ENST00000363000 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.92-201ENST00000363043 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 RNU6-682P-201ENST00000363843 106 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.235-201ENST00000364412 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.306-201ENST00000365015 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.308-201ENST00000365043 101 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.312-201ENST00000365089 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.322-201ENST00000365151 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 MTATP6P29-201ENST00000415057 132 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.650-201ENST00000459002 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 RN7SKP298-201ENST00000515950 94 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 RNU6-1018P-201ENST00000516577 106 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.777-201ENST00000516982 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.771-201ENST00000598668 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.789-201ENST00000622480 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 MIR429-201ENST00000362106 83 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.527-201ENST00000384573 102 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.647-201ENST00000459194 112 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.640-201ENST00000459296 112 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 AC093424.1-201ENST00000604999 338 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.803-201ENST00000614432 112 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.815-201ENST00000616655 112 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 U2.7-201ENST00000619197 100 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.795-201ENST00000619475 112 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.827-201ENST00000638104 112 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 RNU1-115P-201ENST00000365329 160 ntBASIC-4.27□□□□□ -3.09
LINC00643Q86TS7 RNU6-381P-201ENST00000391259 108 ntBASIC-4.27□□□□□ -3.09
LINC00643Q86TS7 RNU6-373P-201ENST00000411247 98 ntBASIC-4.27□□□□□ -3.09
LINC00643Q86TS7 AC099799.1-201ENST00000439809 192 ntBASIC-4.27□□□□□ -3.09
LINC00643Q86TS7 MIR3163-201ENST00000581592 73 ntBASIC-4.27□□□□□ -3.09
LINC00643Q86TS7 AC013734.1-201ENST00000619329 111 ntBASIC-4.27□□□□□ -3.09
LINC00643Q86TS7 U6.97-201ENST00000636904 101 ntBASIC-4.27□□□□□ -3.09
LINC00643Q86TS7 RNU6-483P-201ENST00000384088 108 ntBASIC-4.28□□□□□ -3.09
LINC00643Q86TS7 MIR759-201ENST00000390224 91 ntBASIC-4.28□□□□□ -3.09
LINC00643Q86TS7 SNORD90-201ENST00000391145 111 ntBASIC-4.28□□□□□ -3.09
LINC00643Q86TS7 DLEU2_1.2-201ENST00000614667 120 ntBASIC-4.28□□□□□ -3.09
LINC00643Q86TS7 MIR3170-201ENST00000582699 77 ntBASIC-4.29□□□□□ -3.1
LINC00643Q86TS7 AC037487.3-201ENST00000606668 112 ntBASIC-4.29□□□□□ -3.1
Retrieved 100 of 98,524 protein–RNA pairs in 204.1 ms