Protein–RNA interactions for Protein: Q6UXH8

CCBE1, Collagen and calcium-binding EGF domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1Q6UXH8 uc_338.28-201ENST00000612082 187 ntBASIC0.34□□□□□ -2.36
CCBE1Q6UXH8 Y_RNA.10-201ENST00000362371 110 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 Y_RNA.95-201ENST00000363079 95 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 SNORD118-201ENST00000363593 134 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 RNU6-1125P-201ENST00000363601 107 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 SNORD45B-201ENST00000364617 72 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 Y_RNA.467-201ENST00000384297 102 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 RNU6-480P-201ENST00000384332 107 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 MIR548L-201ENST00000408303 86 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 Y_RNA.601-201ENST00000410500 113 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 MIR1468-201ENST00000410600 86 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 RNA5SP25-201ENST00000410815 110 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 AL161932.1-201ENST00000437408 146 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 AC069271.1-201ENST00000445577 156 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 SNORA68.3-201ENST00000515906 83 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 RNU6-904P-201ENST00000516206 101 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 AC023932.2-201ENST00000603176 175 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 AC012531.4-201ENST00000616509 177 ntBASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.33□□□□□ -2.36
CCBE1Q6UXH8 RNU6-726P-201ENST00000364680 107 ntBASIC0.32□□□□□ -2.36
CCBE1Q6UXH8 SNORA51.5-201ENST00000384126 131 ntBASIC0.32□□□□□ -2.36
CCBE1Q6UXH8 MIR590-201ENST00000385008 97 ntBASIC0.32□□□□□ -2.36
CCBE1Q6UXH8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.32□□□□□ -2.36
CCBE1Q6UXH8 SCARNA23-201ENST00000516060 130 ntBASIC0.32□□□□□ -2.36
CCBE1Q6UXH8 MIR4777-201ENST00000583710 86 ntBASIC0.32□□□□□ -2.36
CCBE1Q6UXH8 MIR4723-201ENST00000585070 81 ntBASIC0.32□□□□□ -2.36
CCBE1Q6UXH8 Y_RNA.78-201ENST00000362970 110 ntBASIC0.31□□□□□ -2.36
CCBE1Q6UXH8 SNORD44.1-201ENST00000363202 61 ntBASIC0.31□□□□□ -2.36
CCBE1Q6UXH8 RNU6-1244P-201ENST00000363614 108 ntBASIC0.31□□□□□ -2.36
CCBE1Q6UXH8 RNU6-215P-201ENST00000365169 102 ntBASIC0.31□□□□□ -2.36
CCBE1Q6UXH8 Y_RNA.457-201ENST00000384237 111 ntBASIC0.31□□□□□ -2.36
CCBE1Q6UXH8 RNU6-758P-201ENST00000516292 89 ntBASIC0.31□□□□□ -2.36
CCBE1Q6UXH8 RNU6-109P-201ENST00000516364 107 ntBASIC0.31□□□□□ -2.36
CCBE1Q6UXH8 RNU6-184P-201ENST00000516514 107 ntBASIC0.31□□□□□ -2.36
CCBE1Q6UXH8 AC025521.1-201ENST00000621624 286 ntBASIC0.31□□□□□ -2.36
CCBE1Q6UXH8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CCBE1Q6UXH8 RNU6-957P-201ENST00000363652 99 ntBASIC0.3□□□□□ -2.36
CCBE1Q6UXH8 RNU6-756P-201ENST00000383997 107 ntBASIC0.3□□□□□ -2.36
CCBE1Q6UXH8 RNU6-813P-201ENST00000384691 107 ntBASIC0.3□□□□□ -2.36
CCBE1Q6UXH8 Z95118.1-201ENST00000421372 247 ntBASIC0.3□□□□□ -2.36
CCBE1Q6UXH8 MIR4439-201ENST00000583746 80 ntBASIC0.3□□□□□ -2.36
CCBE1Q6UXH8 AC103810.7-201ENST00000607821 91 ntBASIC0.3□□□□□ -2.36
CCBE1Q6UXH8 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.3□□□□□ -2.36
CCBE1Q6UXH8 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 MIR450A1-201ENST00000362262 91 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 MIRLET7D-201ENST00000362263 87 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 SNORA63.4-201ENST00000362763 126 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 SNORD114-15-201ENST00000364687 72 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 RNU6-1113P-201ENST00000384348 107 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 RNU2-59P-201ENST00000410482 191 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 snoU13.11-201ENST00000459219 104 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 RNU6-863P-201ENST00000515989 104 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 RNU7-13P-201ENST00000516413 62 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 RNU6-919P-201ENST00000516731 104 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 RNU6-537P-201ENST00000517277 103 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 AL513043.2-201ENST00000573941 143 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 MIR4752-201ENST00000579672 72 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 MIR3920-201ENST00000581751 86 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 MIR6718-201ENST00000616153 80 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 TRDV1-202ENST00000621643 102 ntBASIC0.29□□□□□ -2.36
CCBE1Q6UXH8 Y_RNA.423-201ENST00000384057 113 ntBASIC0.28□□□□□ -2.36
CCBE1Q6UXH8 SNORD41.1-201ENST00000391000 69 ntBASIC0.28□□□□□ -2.36
CCBE1Q6UXH8 AL035461.1-201ENST00000421490 332 ntBASIC0.28□□□□□ -2.36
CCBE1Q6UXH8 AL031737.1-201ENST00000450125 223 ntBASIC0.28□□□□□ -2.36
CCBE1Q6UXH8 RNU6-1265P-201ENST00000516342 103 ntBASIC0.28□□□□□ -2.36
CCBE1Q6UXH8 RNU6-766P-201ENST00000362478 107 ntBASIC0.27□□□□□ -2.37
CCBE1Q6UXH8 RNU6-1126P-201ENST00000384002 107 ntBASIC0.27□□□□□ -2.37
CCBE1Q6UXH8 RNU6-44P-201ENST00000384045 107 ntBASIC0.27□□□□□ -2.37
CCBE1Q6UXH8 RNU6-269P-201ENST00000391077 97 ntBASIC0.27□□□□□ -2.37
CCBE1Q6UXH8 RNU6-644P-201ENST00000391155 98 ntBASIC0.27□□□□□ -2.37
CCBE1Q6UXH8 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.27□□□□□ -2.37
CCBE1Q6UXH8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.26□□□□□ -2.37
CCBE1Q6UXH8 RNU6-466P-201ENST00000391224 103 ntBASIC0.26□□□□□ -2.37
CCBE1Q6UXH8 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.26□□□□□ -2.37
CCBE1Q6UXH8 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
CCBE1Q6UXH8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.26□□□□□ -2.37
CCBE1Q6UXH8 AL162376.1-201ENST00000624117 175 ntBASIC0.26□□□□□ -2.37
CCBE1Q6UXH8 U6.100-201ENST00000636230 99 ntBASIC0.26□□□□□ -2.37
CCBE1Q6UXH8 Y_RNA.283-201ENST00000364798 112 ntBASIC0.25□□□□□ -2.37
CCBE1Q6UXH8 Y_RNA.648-201ENST00000459455 110 ntBASIC0.25□□□□□ -2.37
CCBE1Q6UXH8 RNU7-61P-201ENST00000515897 61 ntBASIC0.25□□□□□ -2.37
CCBE1Q6UXH8 RNU6-287P-201ENST00000516230 98 ntBASIC0.25□□□□□ -2.37
CCBE1Q6UXH8 Y_RNA.705-201ENST00000516862 110 ntBASIC0.25□□□□□ -2.37
CCBE1Q6UXH8 MIR548AG2-201ENST00000581228 64 ntBASIC0.25□□□□□ -2.37
CCBE1Q6UXH8 MIR6755-201ENST00000619993 66 ntBASIC0.25□□□□□ -2.37
CCBE1Q6UXH8 Y_RNA.107-201ENST00000363190 121 ntBASIC0.24□□□□□ -2.37
CCBE1Q6UXH8 SNORD114-31-201ENST00000363219 75 ntBASIC0.24□□□□□ -2.37
CCBE1Q6UXH8 RNU6-755P-201ENST00000364400 103 ntBASIC0.24□□□□□ -2.37
CCBE1Q6UXH8 RNA5SP299-201ENST00000391203 116 ntBASIC0.24□□□□□ -2.37
CCBE1Q6UXH8 RNU6-972P-201ENST00000391208 107 ntBASIC0.24□□□□□ -2.37
CCBE1Q6UXH8 Y_RNA.596-201ENST00000410462 109 ntBASIC0.24□□□□□ -2.37
CCBE1Q6UXH8 RNU6-1232P-201ENST00000516299 86 ntBASIC0.24□□□□□ -2.37
CCBE1Q6UXH8 MIR5190-201ENST00000581537 80 ntBASIC0.24□□□□□ -2.37
CCBE1Q6UXH8 MIR4493-201ENST00000584016 73 ntBASIC0.24□□□□□ -2.37
CCBE1Q6UXH8 MTRNR2L2-201ENST00000604882 87 ntBASIC0.24□□□□□ -2.37
CCBE1Q6UXH8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.24□□□□□ -2.37
CCBE1Q6UXH8 Y_RNA.818-201ENST00000618813 71 ntBASIC0.24□□□□□ -2.37
CCBE1Q6UXH8 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.23□□□□□ -2.37
CCBE1Q6UXH8 Y_RNA.93-201ENST00000363066 109 ntBASIC0.23□□□□□ -2.37
CCBE1Q6UXH8 SNORD115-44-201ENST00000365391 82 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 343 ms