Protein–RNA interactions for Protein: Q6SPF0

SAMD1, Atherin, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1Q6SPF0 SNORD53-201ENST00000579969 78 ntBASIC3.09□□□□□ -1.91
SAMD1Q6SPF0 7SK.8-201ENST00000612110 250 ntBASIC3.09□□□□□ -1.91
SAMD1Q6SPF0 7SK.11-201ENST00000615477 250 ntBASIC3.09□□□□□ -1.91
SAMD1Q6SPF0 AC244669.1-204ENST00000621564 178 ntBASIC3.09□□□□□ -1.91
SAMD1Q6SPF0 7SK.13-201ENST00000622040 250 ntBASIC3.09□□□□□ -1.91
SAMD1Q6SPF0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SAMD1Q6SPF0 RNU1-141P-201ENST00000364623 158 ntBASIC3.08□□□□□ -1.92
SAMD1Q6SPF0 MIR548F3-201ENST00000408509 87 ntBASIC3.08□□□□□ -1.92
SAMD1Q6SPF0 snoU13.15-201ENST00000459407 104 ntBASIC3.08□□□□□ -1.92
SAMD1Q6SPF0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC3.08□□□□□ -1.92
SAMD1Q6SPF0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SAMD1Q6SPF0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
SAMD1Q6SPF0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SAMD1Q6SPF0 MIR26A1-201ENST00000362205 77 ntBASIC3.07□□□□□ -1.92
SAMD1Q6SPF0 SNORA9.1-201ENST00000362412 131 ntBASIC3.07□□□□□ -1.92
SAMD1Q6SPF0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.07□□□□□ -1.92
SAMD1Q6SPF0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
SAMD1Q6SPF0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SAMD1Q6SPF0 AL356379.1-201ENST00000414105 126 ntBASIC3.06□□□□□ -1.92
SAMD1Q6SPF0 RNU6-1246P-201ENST00000391064 107 ntBASIC3.05□□□□□ -1.92
SAMD1Q6SPF0 RNA5SP247-201ENST00000411181 105 ntBASIC3.05□□□□□ -1.92
SAMD1Q6SPF0 snoU13.23-201ENST00000458863 104 ntBASIC3.05□□□□□ -1.92
SAMD1Q6SPF0 RNA5SP402-201ENST00000517148 110 ntBASIC3.05□□□□□ -1.92
SAMD1Q6SPF0 RNU7-90P-201ENST00000459216 62 ntBASIC3.04□□□□□ -1.92
SAMD1Q6SPF0 SNORA40.16-201ENST00000517238 121 ntBASIC3.04□□□□□ -1.92
SAMD1Q6SPF0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SAMD1Q6SPF0 MIR4639-201ENST00000584938 69 ntBASIC3.03□□□□□ -1.92
SAMD1Q6SPF0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SAMD1Q6SPF0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
SAMD1Q6SPF0 SNORA80D-201ENST00000384488 135 ntBASIC3.02□□□□□ -1.93
SAMD1Q6SPF0 SNORD28-201ENST00000384706 75 ntBASIC3.02□□□□□ -1.93
SAMD1Q6SPF0 MIR758-201ENST00000390227 88 ntBASIC3.02□□□□□ -1.93
SAMD1Q6SPF0 Y_RNA.633-201ENST00000459107 95 ntBASIC3.02□□□□□ -1.93
SAMD1Q6SPF0 AL096840.1-201ENST00000603287 93 ntBASIC3.02□□□□□ -1.93
SAMD1Q6SPF0 RMST_2.1-201ENST00000617263 136 ntBASIC3.02□□□□□ -1.93
SAMD1Q6SPF0 RNU6-716P-201ENST00000365621 103 ntBASIC3.01□□□□□ -1.93
SAMD1Q6SPF0 MIR30A-201ENST00000385092 71 ntBASIC3.01□□□□□ -1.93
SAMD1Q6SPF0 SNORA3.2-201ENST00000408221 125 ntBASIC3.01□□□□□ -1.93
SAMD1Q6SPF0 AC079804.2-201ENST00000490376 200 ntBASIC3.01□□□□□ -1.93
SAMD1Q6SPF0 RNU6-469P-201ENST00000516253 101 ntBASIC3.01□□□□□ -1.93
SAMD1Q6SPF0 RNA5SP320-201ENST00000516263 124 ntBASIC3.01□□□□□ -1.93
SAMD1Q6SPF0 MIR4299-201ENST00000577899 72 ntBASIC3.01□□□□□ -1.93
SAMD1Q6SPF0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC3.01□□□□□ -1.93
SAMD1Q6SPF0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SAMD1Q6SPF0 AC080100.1-201ENST00000624239 5356 ntBASIC3.01□□□□□ -1.93
SAMD1Q6SPF0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SAMD1Q6SPF0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.01□□□□□ -1.93
SAMD1Q6SPF0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
SAMD1Q6SPF0 RNA5SP289-201ENST00000362332 137 ntBASIC3□□□□□ -1.93
SAMD1Q6SPF0 SNORA25.8-201ENST00000364831 128 ntBASIC3□□□□□ -1.93
SAMD1Q6SPF0 MIR545-201ENST00000385085 106 ntBASIC3□□□□□ -1.93
SAMD1Q6SPF0 RNU6-910P-201ENST00000390844 107 ntBASIC3□□□□□ -1.93
SAMD1Q6SPF0 AC002350.1-201ENST00000490759 375 ntBASIC3□□□□□ -1.93
SAMD1Q6SPF0 RNU6-135P-201ENST00000516769 101 ntBASIC3□□□□□ -1.93
SAMD1Q6SPF0 RNU1-40P-201ENST00000516816 164 ntBASIC3□□□□□ -1.93
SAMD1Q6SPF0 RNU1-97P-201ENST00000516872 164 ntBASIC3□□□□□ -1.93
SAMD1Q6SPF0 MIR7110-201ENST00000612638 86 ntBASIC3□□□□□ -1.93
SAMD1Q6SPF0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
SAMD1Q6SPF0 AL603825.1-201ENST00000438481 80 ntBASIC2.99□□□□□ -1.93
SAMD1Q6SPF0 AC015712.3-201ENST00000559380 164 ntBASIC2.99□□□□□ -1.93
SAMD1Q6SPF0 MIR548X-201ENST00000580069 75 ntBASIC2.99□□□□□ -1.93
SAMD1Q6SPF0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SAMD1Q6SPF0 SNORA63.6-201ENST00000364921 119 ntBASIC2.98□□□□□ -1.93
SAMD1Q6SPF0 RNU6-482P-201ENST00000391068 107 ntBASIC2.98□□□□□ -1.93
SAMD1Q6SPF0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.98□□□□□ -1.93
SAMD1Q6SPF0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SAMD1Q6SPF0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SAMD1Q6SPF0 RNU6-726P-201ENST00000364680 107 ntBASIC2.97□□□□□ -1.93
SAMD1Q6SPF0 MIR1827-201ENST00000408549 66 ntBASIC2.97□□□□□ -1.93
SAMD1Q6SPF0 SNORD88.1-201ENST00000408684 91 ntBASIC2.97□□□□□ -1.93
SAMD1Q6SPF0 HMGN2P38-201ENST00000423806 265 ntBASIC2.97□□□□□ -1.93
SAMD1Q6SPF0 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SAMD1Q6SPF0 MIR764-201ENST00000390811 85 ntBASIC2.96□□□□□ -1.94
SAMD1Q6SPF0 AL591806.2-201ENST00000433122 173 ntBASIC2.96□□□□□ -1.94
SAMD1Q6SPF0 RNU6-269P-201ENST00000391077 97 ntBASIC2.95□□□□□ -1.94
SAMD1Q6SPF0 RNA5SP484-201ENST00000458857 111 ntBASIC2.95□□□□□ -1.94
SAMD1Q6SPF0 SNORA44.1-201ENST00000517031 108 ntBASIC2.95□□□□□ -1.94
SAMD1Q6SPF0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SAMD1Q6SPF0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SAMD1Q6SPF0 SNORD116-16-201ENST00000384533 92 ntBASIC2.93□□□□□ -1.94
SAMD1Q6SPF0 MIR27B-201ENST00000385129 97 ntBASIC2.93□□□□□ -1.94
SAMD1Q6SPF0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
SAMD1Q6SPF0 RNA5SP99-201ENST00000364020 114 ntBASIC2.92□□□□□ -1.94
SAMD1Q6SPF0 MIR1289-2-201ENST00000408360 111 ntBASIC2.92□□□□□ -1.94
SAMD1Q6SPF0 RNA5SP282-201ENST00000516355 108 ntBASIC2.92□□□□□ -1.94
SAMD1Q6SPF0 MIR4781-201ENST00000585250 76 ntBASIC2.92□□□□□ -1.94
SAMD1Q6SPF0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SAMD1Q6SPF0 SNORD79.1-201ENST00000516069 84 ntBASIC2.91□□□□□ -1.94
SAMD1Q6SPF0 SCARNA17.3-201ENST00000516381 125 ntBASIC2.91□□□□□ -1.94
SAMD1Q6SPF0 MIR7111-201ENST00000619751 72 ntBASIC2.91□□□□□ -1.94
SAMD1Q6SPF0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
SAMD1Q6SPF0 SNORA8.2-201ENST00000384372 139 ntBASIC2.9□□□□□ -1.95
SAMD1Q6SPF0 MIR652-201ENST00000385278 98 ntBASIC2.9□□□□□ -1.95
SAMD1Q6SPF0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.9□□□□□ -1.95
SAMD1Q6SPF0 CYP3A54P-201ENST00000566950 75 ntBASIC2.9□□□□□ -1.95
SAMD1Q6SPF0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SAMD1Q6SPF0 RNU6-810P-201ENST00000364001 107 ntBASIC2.89□□□□□ -1.95
SAMD1Q6SPF0 MIR221-201ENST00000385135 110 ntBASIC2.89□□□□□ -1.95
SAMD1Q6SPF0 SNORA40B-201ENST00000385573 128 ntBASIC2.89□□□□□ -1.95
SAMD1Q6SPF0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 212.9 ms