Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RNU6-35P-201ENST00000384530 107 ntBASIC2.21□□□□□ -2.06
CTC1Q2NKJ3 AL356379.1-201ENST00000414105 126 ntBASIC2.21□□□□□ -2.06
CTC1Q2NKJ3 AL157398.1-201ENST00000452981 186 ntBASIC2.21□□□□□ -2.06
CTC1Q2NKJ3 AC106800.4-201ENST00000614905 153 ntBASIC2.21□□□□□ -2.06
CTC1Q2NKJ3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CTC1Q2NKJ3 Y_RNA.330-201ENST00000365230 109 ntBASIC2.2□□□□□ -2.06
CTC1Q2NKJ3 RNU6-364P-201ENST00000384387 107 ntBASIC2.2□□□□□ -2.06
CTC1Q2NKJ3 MIR216B-201ENST00000390186 82 ntBASIC2.2□□□□□ -2.06
CTC1Q2NKJ3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.2□□□□□ -2.06
CTC1Q2NKJ3 SNORA77B-201ENST00000578179 125 ntBASIC2.2□□□□□ -2.06
CTC1Q2NKJ3 MIR6739-201ENST00000622461 75 ntBASIC2.2□□□□□ -2.06
CTC1Q2NKJ3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.2□□□□□ -2.06
CTC1Q2NKJ3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.19□□□□□ -2.06
CTC1Q2NKJ3 AC067940.1-201ENST00000458411 300 ntBASIC2.19□□□□□ -2.06
CTC1Q2NKJ3 snoU13.9-201ENST00000458927 103 ntBASIC2.19□□□□□ -2.06
CTC1Q2NKJ3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.19□□□□□ -2.06
CTC1Q2NKJ3 SNORD33-201ENST00000362761 85 ntBASIC2.18□□□□□ -2.06
CTC1Q2NKJ3 SNORD115-24-201ENST00000363528 82 ntBASIC2.18□□□□□ -2.06
CTC1Q2NKJ3 RNU6-520P-201ENST00000384717 104 ntBASIC2.18□□□□□ -2.06
CTC1Q2NKJ3 MIR4676-201ENST00000583078 72 ntBASIC2.18□□□□□ -2.06
CTC1Q2NKJ3 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.18□□□□□ -2.06
CTC1Q2NKJ3 MIR617-201ENST00000385030 97 ntBASIC2.17□□□□□ -2.06
CTC1Q2NKJ3 MIR519E-201ENST00000385075 84 ntBASIC2.17□□□□□ -2.06
CTC1Q2NKJ3 MIR30A-201ENST00000385092 71 ntBASIC2.17□□□□□ -2.06
CTC1Q2NKJ3 RNU6-980P-201ENST00000516925 103 ntBASIC2.17□□□□□ -2.06
CTC1Q2NKJ3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CTC1Q2NKJ3 RNA5SP403-201ENST00000363598 108 ntBASIC2.16□□□□□ -2.06
CTC1Q2NKJ3 SNORD113.3-201ENST00000364630 78 ntBASIC2.16□□□□□ -2.06
CTC1Q2NKJ3 SNORD113-2-201ENST00000391082 72 ntBASIC2.16□□□□□ -2.06
CTC1Q2NKJ3 RNU6-321P-201ENST00000410912 106 ntBASIC2.16□□□□□ -2.06
CTC1Q2NKJ3 RNU7-102P-201ENST00000458948 62 ntBASIC2.16□□□□□ -2.06
CTC1Q2NKJ3 RNU7-104P-201ENST00000459398 79 ntBASIC2.16□□□□□ -2.06
CTC1Q2NKJ3 RNU7-40P-201ENST00000516397 64 ntBASIC2.16□□□□□ -2.06
CTC1Q2NKJ3 RNU7-161P-201ENST00000517289 62 ntBASIC2.16□□□□□ -2.06
CTC1Q2NKJ3 MIR8063-201ENST00000621930 81 ntBASIC2.16□□□□□ -2.06
CTC1Q2NKJ3 MIR378A-201ENST00000362177 66 ntBASIC2.15□□□□□ -2.07
CTC1Q2NKJ3 RNU6-930P-201ENST00000390938 100 ntBASIC2.15□□□□□ -2.07
CTC1Q2NKJ3 snoU13.13-201ENST00000458842 104 ntBASIC2.15□□□□□ -2.07
CTC1Q2NKJ3 AC027335.2-201ENST00000624030 375 ntBASIC2.15□□□□□ -2.07
CTC1Q2NKJ3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CTC1Q2NKJ3 Y_RNA.32-201ENST00000362589 110 ntBASIC2.14□□□□□ -2.07
CTC1Q2NKJ3 RNA5SP160-201ENST00000364866 120 ntBASIC2.14□□□□□ -2.07
CTC1Q2NKJ3 Y_RNA.355-201ENST00000365462 98 ntBASIC2.14□□□□□ -2.07
CTC1Q2NKJ3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CTC1Q2NKJ3 RPS26P5-201ENST00000418544 335 ntBASIC2.14□□□□□ -2.07
CTC1Q2NKJ3 SNORA31.14-201ENST00000516728 116 ntBASIC2.14□□□□□ -2.07
CTC1Q2NKJ3 AC036111.3-201ENST00000526389 112 ntBASIC2.14□□□□□ -2.07
CTC1Q2NKJ3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.14□□□□□ -2.07
CTC1Q2NKJ3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CTC1Q2NKJ3 RNU6-1065P-201ENST00000384513 106 ntBASIC2.13□□□□□ -2.07
CTC1Q2NKJ3 MIR517B-201ENST00000385102 67 ntBASIC2.13□□□□□ -2.07
CTC1Q2NKJ3 MIR938-201ENST00000401216 83 ntBASIC2.13□□□□□ -2.07
CTC1Q2NKJ3 MIR3664-201ENST00000579074 99 ntBASIC2.13□□□□□ -2.07
CTC1Q2NKJ3 U4.4-201ENST00000620626 117 ntBASIC2.13□□□□□ -2.07
CTC1Q2NKJ3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CTC1Q2NKJ3 RNU6-1162P-201ENST00000384443 104 ntBASIC2.12□□□□□ -2.07
CTC1Q2NKJ3 HMGN2P19-201ENST00000425149 265 ntBASIC2.12□□□□□ -2.07
CTC1Q2NKJ3 AC079140.2-201ENST00000506193 142 ntBASIC2.12□□□□□ -2.07
CTC1Q2NKJ3 AL096840.1-201ENST00000603287 93 ntBASIC2.12□□□□□ -2.07
CTC1Q2NKJ3 AL157834.3-201ENST00000615543 103 ntBASIC2.12□□□□□ -2.07
CTC1Q2NKJ3 MIR8070-201ENST00000616510 88 ntBASIC2.12□□□□□ -2.07
CTC1Q2NKJ3 AL359851.1-201ENST00000569460 4997 ntBASIC2.11□□□□□ -2.07
CTC1Q2NKJ3 RNU6-698P-201ENST00000363523 107 ntBASIC2.11□□□□□ -2.07
CTC1Q2NKJ3 RNU6-34P-201ENST00000364874 107 ntBASIC2.11□□□□□ -2.07
CTC1Q2NKJ3 MIR499A-201ENST00000384903 122 ntBASIC2.11□□□□□ -2.07
CTC1Q2NKJ3 MIR676-201ENST00000390702 67 ntBASIC2.11□□□□□ -2.07
CTC1Q2NKJ3 RNU1-123P-201ENST00000458950 160 ntBASIC2.11□□□□□ -2.07
CTC1Q2NKJ3 RNU7-174P-201ENST00000516248 59 ntBASIC2.11□□□□□ -2.07
CTC1Q2NKJ3 AC018659.1-201ENST00000551083 169 ntBASIC2.11□□□□□ -2.07
CTC1Q2NKJ3 AC023827.1-201ENST00000569247 97 ntBASIC2.11□□□□□ -2.07
CTC1Q2NKJ3 MIR3198-2-201ENST00000577868 80 ntBASIC2.11□□□□□ -2.07
CTC1Q2NKJ3 uc_338.20-201ENST00000621563 178 ntBASIC2.11□□□□□ -2.07
CTC1Q2NKJ3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
CTC1Q2NKJ3 AC019176.1-201ENST00000518519 225 ntBASIC2.1□□□□□ -2.07
CTC1Q2NKJ3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CTC1Q2NKJ3 RNU4-33P-201ENST00000364316 85 ntBASIC2.09□□□□□ -2.07
CTC1Q2NKJ3 RNA5SP190-201ENST00000365222 118 ntBASIC2.09□□□□□ -2.07
CTC1Q2NKJ3 MIR521-2-201ENST00000384818 87 ntBASIC2.09□□□□□ -2.07
CTC1Q2NKJ3 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
CTC1Q2NKJ3 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
CTC1Q2NKJ3 RNA5SP364-201ENST00000516938 78 ntBASIC2.09□□□□□ -2.07
CTC1Q2NKJ3 AL359821.1-201ENST00000605519 182 ntBASIC2.09□□□□□ -2.07
CTC1Q2NKJ3 uc_338.16-201ENST00000621804 95 ntBASIC2.09□□□□□ -2.07
CTC1Q2NKJ3 Y_RNA.118-201ENST00000363300 101 ntBASIC2.08□□□□□ -2.08
CTC1Q2NKJ3 SNORA41B-201ENST00000384785 128 ntBASIC2.08□□□□□ -2.08
CTC1Q2NKJ3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CTC1Q2NKJ3 AP1B1P2-201ENST00000416196 106 ntBASIC2.08□□□□□ -2.08
CTC1Q2NKJ3 RNU7-119P-201ENST00000459279 63 ntBASIC2.08□□□□□ -2.08
CTC1Q2NKJ3 U2.7-201ENST00000619197 100 ntBASIC2.08□□□□□ -2.08
CTC1Q2NKJ3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.07□□□□□ -2.08
CTC1Q2NKJ3 SNORD1A-201ENST00000364968 72 ntBASIC2.07□□□□□ -2.08
CTC1Q2NKJ3 SNORD13-201ENST00000459299 104 ntBASIC2.07□□□□□ -2.08
CTC1Q2NKJ3 MIR3937-201ENST00000580135 106 ntBASIC2.07□□□□□ -2.08
CTC1Q2NKJ3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CTC1Q2NKJ3 SNORA75.2-201ENST00000391138 150 ntBASIC2.06□□□□□ -2.08
CTC1Q2NKJ3 SNORA75.3-201ENST00000391231 150 ntBASIC2.06□□□□□ -2.08
CTC1Q2NKJ3 AC021146.9-201ENST00000512503 156 ntBASIC2.06□□□□□ -2.08
CTC1Q2NKJ3 RNU6-231P-201ENST00000517122 103 ntBASIC2.06□□□□□ -2.08
CTC1Q2NKJ3 RNU6-165P-201ENST00000517170 99 ntBASIC2.06□□□□□ -2.08
CTC1Q2NKJ3 MIR4804-201ENST00000581683 73 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms