Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 Y_RNA.32-201ENST00000362589 110 ntBASIC1.55□□□□□ -2.16
SOX4Q06945 RNU6-824P-201ENST00000363724 104 ntBASIC1.55□□□□□ -2.16
SOX4Q06945 MIR154-201ENST00000385243 84 ntBASIC1.55□□□□□ -2.16
SOX4Q06945 RNU6-321P-201ENST00000410912 106 ntBASIC1.55□□□□□ -2.16
SOX4Q06945 AC067940.1-201ENST00000458411 300 ntBASIC1.55□□□□□ -2.16
SOX4Q06945 MIR4781-201ENST00000585250 76 ntBASIC1.55□□□□□ -2.16
SOX4Q06945 Y_RNA.118-201ENST00000363300 101 ntBASIC1.54□□□□□ -2.16
SOX4Q06945 SNORD115-44-201ENST00000365391 82 ntBASIC1.54□□□□□ -2.16
SOX4Q06945 U3.27-201ENST00000391237 200 ntBASIC1.54□□□□□ -2.16
SOX4Q06945 MIR1827-201ENST00000408549 66 ntBASIC1.54□□□□□ -2.16
SOX4Q06945 MIR4421-201ENST00000578133 69 ntBASIC1.54□□□□□ -2.16
SOX4Q06945 U6.81-201ENST00000612550 106 ntBASIC1.54□□□□□ -2.16
SOX4Q06945 SNORD115-24-201ENST00000363528 82 ntBASIC1.53□□□□□ -2.16
SOX4Q06945 Y_RNA.174-201ENST00000363781 105 ntBASIC1.53□□□□□ -2.16
SOX4Q06945 RNU6-649P-201ENST00000384463 107 ntBASIC1.53□□□□□ -2.16
SOX4Q06945 SNORD12-201ENST00000391002 90 ntBASIC1.53□□□□□ -2.16
SOX4Q06945 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.53□□□□□ -2.16
SOX4Q06945 RNU7-13P-201ENST00000516413 62 ntBASIC1.53□□□□□ -2.16
SOX4Q06945 MIR3675-201ENST00000583661 73 ntBASIC1.53□□□□□ -2.16
SOX4Q06945 Y_RNA.164-201ENST00000363709 102 ntBASIC1.52□□□□□ -2.17
SOX4Q06945 SNORA7.1-201ENST00000363750 139 ntBASIC1.52□□□□□ -2.17
SOX4Q06945 RNU6-540P-201ENST00000384622 101 ntBASIC1.52□□□□□ -2.17
SOX4Q06945 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SOX4Q06945 RNU1-92P-201ENST00000517017 135 ntBASIC1.52□□□□□ -2.17
SOX4Q06945 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.52□□□□□ -2.17
SOX4Q06945 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SOX4Q06945 RNA5SP403-201ENST00000363598 108 ntBASIC1.51□□□□□ -2.17
SOX4Q06945 SNORD115-31-201ENST00000365318 82 ntBASIC1.51□□□□□ -2.17
SOX4Q06945 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
SOX4Q06945 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.51□□□□□ -2.17
SOX4Q06945 RNU6-1177P-201ENST00000391058 104 ntBASIC1.51□□□□□ -2.17
SOX4Q06945 SNORD30.1-201ENST00000391309 70 ntBASIC1.51□□□□□ -2.17
SOX4Q06945 AC002429.1-201ENST00000437672 148 ntBASIC1.51□□□□□ -2.17
SOX4Q06945 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SOX4Q06945 RMST_2.1-201ENST00000617263 136 ntBASIC1.51□□□□□ -2.17
SOX4Q06945 MIR222-201ENST00000384992 110 ntBASIC1.5□□□□□ -2.17
SOX4Q06945 MIR2113-201ENST00000459007 91 ntBASIC1.5□□□□□ -2.17
SOX4Q06945 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.49□□□□□ -2.17
SOX4Q06945 RNU7-161P-201ENST00000517289 62 ntBASIC1.49□□□□□ -2.17
SOX4Q06945 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.49□□□□□ -2.17
SOX4Q06945 Y_RNA.226-201ENST00000364337 114 ntBASIC1.48□□□□□ -2.17
SOX4Q06945 RNU6-1126P-201ENST00000384002 107 ntBASIC1.48□□□□□ -2.17
SOX4Q06945 MIR1287-201ENST00000408492 90 ntBASIC1.48□□□□□ -2.17
SOX4Q06945 AC125388.1-201ENST00000459631 156 ntBASIC1.48□□□□□ -2.17
SOX4Q06945 TRMT112P2-201ENST00000512910 132 ntBASIC1.48□□□□□ -2.17
SOX4Q06945 MIR548AG2-201ENST00000581228 64 ntBASIC1.48□□□□□ -2.17
SOX4Q06945 MIR3920-201ENST00000581751 86 ntBASIC1.48□□□□□ -2.17
SOX4Q06945 MIR4773-1-201ENST00000637203 78 ntBASIC1.48□□□□□ -2.17
SOX4Q06945 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SOX4Q06945 Y_RNA.340-201ENST00000365330 92 ntBASIC1.47□□□□□ -2.17
SOX4Q06945 RNA5SP61-201ENST00000516453 100 ntBASIC1.47□□□□□ -2.17
SOX4Q06945 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SOX4Q06945 SNORD45.1-201ENST00000363181 77 ntBASIC1.46□□□□□ -2.18
SOX4Q06945 Y_RNA.258-201ENST00000364613 105 ntBASIC1.46□□□□□ -2.18
SOX4Q06945 RNU6-382P-201ENST00000365181 106 ntBASIC1.46□□□□□ -2.18
SOX4Q06945 SNORA25-201ENST00000384384 134 ntBASIC1.46□□□□□ -2.18
SOX4Q06945 RNU7-104P-201ENST00000459398 79 ntBASIC1.46□□□□□ -2.18
SOX4Q06945 AL136317.1-201ENST00000612653 226 ntBASIC1.46□□□□□ -2.18
SOX4Q06945 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
SOX4Q06945 RNA5SP327-201ENST00000362494 101 ntBASIC1.45□□□□□ -2.18
SOX4Q06945 Y_RNA.327-201ENST00000365201 102 ntBASIC1.45□□□□□ -2.18
SOX4Q06945 RNA5SP117-201ENST00000365294 118 ntBASIC1.45□□□□□ -2.18
SOX4Q06945 RNU6-663P-201ENST00000391105 106 ntBASIC1.45□□□□□ -2.18
SOX4Q06945 RNU1-123P-201ENST00000458950 160 ntBASIC1.45□□□□□ -2.18
SOX4Q06945 RNU6-274P-201ENST00000459566 107 ntBASIC1.45□□□□□ -2.18
SOX4Q06945 AC002350.1-201ENST00000490759 375 ntBASIC1.45□□□□□ -2.18
SOX4Q06945 AL078603.1-201ENST00000603824 313 ntBASIC1.45□□□□□ -2.18
SOX4Q06945 AL353770.2-201ENST00000620024 78 ntBASIC1.45□□□□□ -2.18
SOX4Q06945 U6.111-201ENST00000636093 83 ntBASIC1.45□□□□□ -2.18
SOX4Q06945 Y_RNA.386-201ENST00000383913 105 ntBASIC1.44□□□□□ -2.18
SOX4Q06945 MIR644A-201ENST00000385262 94 ntBASIC1.44□□□□□ -2.18
SOX4Q06945 SNORD89-201ENST00000390981 114 ntBASIC1.44□□□□□ -2.18
SOX4Q06945 MIR337-201ENST00000362281 93 ntBASIC1.43□□□□□ -2.18
SOX4Q06945 RNU6-800P-201ENST00000384473 103 ntBASIC1.43□□□□□ -2.18
SOX4Q06945 MIR617-201ENST00000385030 97 ntBASIC1.43□□□□□ -2.18
SOX4Q06945 MIR216B-201ENST00000390186 82 ntBASIC1.43□□□□□ -2.18
SOX4Q06945 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.43□□□□□ -2.18
SOX4Q06945 RNU6-1110P-201ENST00000516462 101 ntBASIC1.43□□□□□ -2.18
SOX4Q06945 MIR3660-201ENST00000584845 100 ntBASIC1.43□□□□□ -2.18
SOX4Q06945 AC067863.3-201ENST00000624172 122 ntBASIC1.43□□□□□ -2.18
SOX4Q06945 RNU6-392P-201ENST00000364926 101 ntBASIC1.42□□□□□ -2.18
SOX4Q06945 RNU6-895P-201ENST00000384125 103 ntBASIC1.42□□□□□ -2.18
SOX4Q06945 SNORD45A-201ENST00000384512 84 ntBASIC1.42□□□□□ -2.18
SOX4Q06945 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SOX4Q06945 RPS29P23-201ENST00000458635 123 ntBASIC1.42□□□□□ -2.18
SOX4Q06945 RNU6-752P-201ENST00000516376 102 ntBASIC1.42□□□□□ -2.18
SOX4Q06945 MIR8053-201ENST00000613344 75 ntBASIC1.42□□□□□ -2.18
SOX4Q06945 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.42□□□□□ -2.18
SOX4Q06945 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
SOX4Q06945 MIR7-2-201ENST00000384970 110 ntBASIC1.41□□□□□ -2.18
SOX4Q06945 SNORA40.6-201ENST00000391153 128 ntBASIC1.41□□□□□ -2.18
SOX4Q06945 MIR1265-201ENST00000408444 86 ntBASIC1.41□□□□□ -2.18
SOX4Q06945 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.4□□□□□ -2.19
SOX4Q06945 SNORD115-22-201ENST00000364456 82 ntBASIC1.4□□□□□ -2.19
SOX4Q06945 MIR519E-201ENST00000385075 84 ntBASIC1.4□□□□□ -2.19
SOX4Q06945 SNORD105-201ENST00000386910 85 ntBASIC1.4□□□□□ -2.19
SOX4Q06945 AC244098.3-201ENST00000424803 96 ntBASIC1.4□□□□□ -2.19
SOX4Q06945 RNU6-135P-201ENST00000516769 101 ntBASIC1.4□□□□□ -2.19
SOX4Q06945 AC068338.1-201ENST00000565567 176 ntBASIC1.4□□□□□ -2.19
SOX4Q06945 MIR8070-201ENST00000616510 88 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 231.8 ms