Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MIR7111-201ENST00000619751 72 ntBASIC-1.82□□□□□ -2.7
CCL20P78556 RNU6-363P-201ENST00000362895 105 ntBASIC-1.83□□□□□ -2.7
CCL20P78556 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.83□□□□□ -2.7
CCL20P78556 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.83□□□□□ -2.7
CCL20P78556 RNU6-713P-201ENST00000384761 107 ntBASIC-1.83□□□□□ -2.7
CCL20P78556 MIR759-201ENST00000390224 91 ntBASIC-1.83□□□□□ -2.7
CCL20P78556 RNU6-576P-201ENST00000390854 102 ntBASIC-1.83□□□□□ -2.7
CCL20P78556 MIR3646-201ENST00000578301 84 ntBASIC-1.83□□□□□ -2.7
CCL20P78556 MIR4536-1-201ENST00000583537 88 ntBASIC-1.83□□□□□ -2.7
CCL20P78556 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.83□□□□□ -2.7
CCL20P78556 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.84□□□□□ -2.7
CCL20P78556 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.84□□□□□ -2.7
CCL20P78556 RNU4-61P-201ENST00000411243 107 ntBASIC-1.84□□□□□ -2.7
CCL20P78556 snoU13.19-201ENST00000459148 104 ntBASIC-1.84□□□□□ -2.7
CCL20P78556 AC138207.3-201ENST00000585289 166 ntBASIC-1.84□□□□□ -2.7
CCL20P78556 AC090617.8-201ENST00000623339 167 ntBASIC-1.84□□□□□ -2.7
CCL20P78556 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.85□□□□□ -2.71
CCL20P78556 RNY4P28-201ENST00000365281 93 ntBASIC-1.85□□□□□ -2.71
CCL20P78556 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.85□□□□□ -2.71
CCL20P78556 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.85□□□□□ -2.71
CCL20P78556 MIR29B1-201ENST00000385015 81 ntBASIC-1.85□□□□□ -2.71
CCL20P78556 SNORA63.2-201ENST00000362603 126 ntBASIC-1.86□□□□□ -2.71
CCL20P78556 RNU6-924P-201ENST00000362926 108 ntBASIC-1.86□□□□□ -2.71
CCL20P78556 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.86□□□□□ -2.71
CCL20P78556 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.86□□□□□ -2.71
CCL20P78556 MIR4680-201ENST00000580906 66 ntBASIC-1.86□□□□□ -2.71
CCL20P78556 AL442128.1-201ENST00000615151 90 ntBASIC-1.86□□□□□ -2.71
CCL20P78556 MIR6818-201ENST00000621576 65 ntBASIC-1.86□□□□□ -2.71
CCL20P78556 RNY1P11-201ENST00000363759 113 ntBASIC-1.87□□□□□ -2.71
CCL20P78556 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.87□□□□□ -2.71
CCL20P78556 RNU6-746P-201ENST00000384112 109 ntBASIC-1.87□□□□□ -2.71
CCL20P78556 RNU6-409P-201ENST00000384114 104 ntBASIC-1.87□□□□□ -2.71
CCL20P78556 RNU6-474P-201ENST00000384243 107 ntBASIC-1.87□□□□□ -2.71
CCL20P78556 SNORA26.4-201ENST00000391188 123 ntBASIC-1.87□□□□□ -2.71
CCL20P78556 RNU7-134P-201ENST00000458997 64 ntBASIC-1.87□□□□□ -2.71
CCL20P78556 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.87□□□□□ -2.71
CCL20P78556 RNA5SP67-201ENST00000516422 131 ntBASIC-1.87□□□□□ -2.71
CCL20P78556 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.87□□□□□ -2.71
CCL20P78556 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.87□□□□□ -2.71
CCL20P78556 SNORD115-33-201ENST00000363723 82 ntBASIC-1.88□□□□□ -2.71
CCL20P78556 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.88□□□□□ -2.71
CCL20P78556 MIR548D2-201ENST00000384955 97 ntBASIC-1.88□□□□□ -2.71
CCL20P78556 SNORD63.1-201ENST00000516178 80 ntBASIC-1.88□□□□□ -2.71
CCL20P78556 MIR3140-201ENST00000583685 90 ntBASIC-1.88□□□□□ -2.71
CCL20P78556 U6.104-201ENST00000637979 90 ntBASIC-1.88□□□□□ -2.71
CCL20P78556 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.89□□□□□ -2.71
CCL20P78556 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.89□□□□□ -2.71
CCL20P78556 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.89□□□□□ -2.71
CCL20P78556 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.89□□□□□ -2.71
CCL20P78556 MIR527-201ENST00000385244 85 ntBASIC-1.89□□□□□ -2.71
CCL20P78556 SNORD37.2-201ENST00000391075 66 ntBASIC-1.89□□□□□ -2.71
CCL20P78556 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.89□□□□□ -2.71
CCL20P78556 MIR548H3-201ENST00000408771 118 ntBASIC-1.89□□□□□ -2.71
CCL20P78556 AC025521.1-201ENST00000621624 286 ntBASIC-1.89□□□□□ -2.71
CCL20P78556 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.9□□□□□ -2.71
CCL20P78556 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.9□□□□□ -2.71
CCL20P78556 MIR1302-6-201ENST00000408466 90 ntBASIC-1.9□□□□□ -2.71
CCL20P78556 SNORD75.2-201ENST00000408784 58 ntBASIC-1.9□□□□□ -2.71
CCL20P78556 RBMX2P4-201ENST00000441256 376 ntBASIC-1.9□□□□□ -2.71
CCL20P78556 SNORD127-201ENST00000458892 86 ntBASIC-1.9□□□□□ -2.71
CCL20P78556 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.91□□□□□ -2.72
CCL20P78556 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.91□□□□□ -2.72
CCL20P78556 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.91□□□□□ -2.72
CCL20P78556 RNU6-30P-201ENST00000384561 107 ntBASIC-1.91□□□□□ -2.72
CCL20P78556 MIR548A1-201ENST00000385041 97 ntBASIC-1.91□□□□□ -2.72
CCL20P78556 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.91□□□□□ -2.72
CCL20P78556 RNU7-24P-201ENST00000458867 62 ntBASIC-1.91□□□□□ -2.72
CCL20P78556 RNU4-32P-201ENST00000363404 141 ntBASIC-1.92□□□□□ -2.72
CCL20P78556 MT-TW-201ENST00000387382 68 ntBASIC-1.92□□□□□ -2.72
CCL20P78556 MIR1255B2-201ENST00000408618 67 ntBASIC-1.92□□□□□ -2.72
CCL20P78556 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.93□□□□□ -2.72
CCL20P78556 SNORD50.2-201ENST00000365465 70 ntBASIC-1.93□□□□□ -2.72
CCL20P78556 RNU6-132P-201ENST00000383863 107 ntBASIC-1.93□□□□□ -2.72
CCL20P78556 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.93□□□□□ -2.72
CCL20P78556 MIR548U-201ENST00000390728 81 ntBASIC-1.93□□□□□ -2.72
CCL20P78556 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.93□□□□□ -2.72
CCL20P78556 RNU7-85P-201ENST00000458851 63 ntBASIC-1.93□□□□□ -2.72
CCL20P78556 RNA5SP395-201ENST00000516567 118 ntBASIC-1.93□□□□□ -2.72
CCL20P78556 MIR6086-201ENST00000638065 55 ntBASIC-1.93□□□□□ -2.72
CCL20P78556 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.94□□□□□ -2.72
CCL20P78556 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.94□□□□□ -2.72
CCL20P78556 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.94□□□□□ -2.72
CCL20P78556 MIR8485-201ENST00000401372 91 ntBASIC-1.94□□□□□ -2.72
CCL20P78556 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.94□□□□□ -2.72
CCL20P78556 MIR3658-201ENST00000636291 56 ntBASIC-1.94□□□□□ -2.72
CCL20P78556 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.95□□□□□ -2.72
CCL20P78556 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.95□□□□□ -2.72
CCL20P78556 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.95□□□□□ -2.72
CCL20P78556 SNORA24B-201ENST00000384176 131 ntBASIC-1.95□□□□□ -2.72
CCL20P78556 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.95□□□□□ -2.72
CCL20P78556 MIR548P-201ENST00000408336 84 ntBASIC-1.95□□□□□ -2.72
CCL20P78556 HLA-S-202ENST00000425174 53 ntBASIC-1.95□□□□□ -2.72
CCL20P78556 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.95□□□□□ -2.72
CCL20P78556 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.95□□□□□ -2.72
CCL20P78556 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.96□□□□□ -2.72
CCL20P78556 RNU6-312P-201ENST00000364629 107 ntBASIC-1.96□□□□□ -2.72
CCL20P78556 SNORA33.1-201ENST00000364957 130 ntBASIC-1.96□□□□□ -2.72
CCL20P78556 RNU2-51P-201ENST00000410708 197 ntBASIC-1.96□□□□□ -2.72
CCL20P78556 SNORD57-201ENST00000448188 72 ntBASIC-1.96□□□□□ -2.72
CCL20P78556 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.96□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 299.5 ms