Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.21□□□□□ -2.76
HIST1H3AP68431 RNA5SP147-201ENST00000516493 109 ntBASIC-2.21□□□□□ -2.76
HIST1H3AP68431 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.21□□□□□ -2.76
HIST1H3AP68431 MIR4490-201ENST00000582647 84 ntBASIC-2.21□□□□□ -2.76
HIST1H3AP68431 MIR3140-201ENST00000583685 90 ntBASIC-2.21□□□□□ -2.76
HIST1H3AP68431 AC080013.6-201ENST00000606185 215 ntBASIC-2.21□□□□□ -2.76
HIST1H3AP68431 MIR1302-1-201ENST00000637932 143 ntBASIC-2.21□□□□□ -2.76
HIST1H3AP68431 SNORD18.1-201ENST00000363807 70 ntBASIC-2.22□□□□□ -2.76
HIST1H3AP68431 RNU6-540P-201ENST00000384622 101 ntBASIC-2.22□□□□□ -2.76
HIST1H3AP68431 RNU6-823P-201ENST00000391042 103 ntBASIC-2.22□□□□□ -2.76
HIST1H3AP68431 MIR1285-2-201ENST00000408311 88 ntBASIC-2.22□□□□□ -2.76
HIST1H3AP68431 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.22□□□□□ -2.76
HIST1H3AP68431 RNY4P20-201ENST00000516678 93 ntBASIC-2.22□□□□□ -2.76
HIST1H3AP68431 RNU7-6P-201ENST00000516845 62 ntBASIC-2.22□□□□□ -2.76
HIST1H3AP68431 CYP3A54P-201ENST00000566950 75 ntBASIC-2.22□□□□□ -2.76
HIST1H3AP68431 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.22□□□□□ -2.76
HIST1H3AP68431 MIR5683-201ENST00000636514 76 ntBASIC-2.22□□□□□ -2.76
HIST1H3AP68431 MIR487B-201ENST00000385021 84 ntBASIC-2.23□□□□□ -2.77
HIST1H3AP68431 MIR601-201ENST00000385256 79 ntBASIC-2.23□□□□□ -2.77
HIST1H3AP68431 RNU6-876P-201ENST00000391295 104 ntBASIC-2.23□□□□□ -2.77
HIST1H3AP68431 ELOCP20-201ENST00000422460 345 ntBASIC-2.23□□□□□ -2.77
HIST1H3AP68431 FGF7P4-201ENST00000509595 295 ntBASIC-2.23□□□□□ -2.77
HIST1H3AP68431 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.23□□□□□ -2.77
HIST1H3AP68431 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.24□□□□□ -2.77
HIST1H3AP68431 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.24□□□□□ -2.77
HIST1H3AP68431 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.24□□□□□ -2.77
HIST1H3AP68431 SNORD116-2-201ENST00000384274 95 ntBASIC-2.24□□□□□ -2.77
HIST1H3AP68431 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.24□□□□□ -2.77
HIST1H3AP68431 RNU6-806P-201ENST00000365147 105 ntBASIC-2.25□□□□□ -2.77
HIST1H3AP68431 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.25□□□□□ -2.77
HIST1H3AP68431 RNU6-1215P-201ENST00000384441 102 ntBASIC-2.25□□□□□ -2.77
HIST1H3AP68431 SNORD19-201ENST00000391191 68 ntBASIC-2.25□□□□□ -2.77
HIST1H3AP68431 RNU6-101P-201ENST00000410323 104 ntBASIC-2.25□□□□□ -2.77
HIST1H3AP68431 SNORA7.5-201ENST00000410672 110 ntBASIC-2.25□□□□□ -2.77
HIST1H3AP68431 Y_RNA.632-201ENST00000459189 102 ntBASIC-2.25□□□□□ -2.77
HIST1H3AP68431 RNU6-732P-201ENST00000516033 103 ntBASIC-2.25□□□□□ -2.77
HIST1H3AP68431 Y_RNA.711-201ENST00000516993 102 ntBASIC-2.25□□□□□ -2.77
HIST1H3AP68431 MIR1255B1-201ENST00000636325 63 ntBASIC-2.25□□□□□ -2.77
HIST1H3AP68431 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.26□□□□□ -2.77
HIST1H3AP68431 MTND5P22-201ENST00000458380 195 ntBASIC-2.26□□□□□ -2.77
HIST1H3AP68431 RNU7-88P-201ENST00000458752 63 ntBASIC-2.26□□□□□ -2.77
HIST1H3AP68431 SNORD19B-201ENST00000459623 84 ntBASIC-2.26□□□□□ -2.77
HIST1H3AP68431 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.26□□□□□ -2.77
HIST1H3AP68431 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.26□□□□□ -2.77
HIST1H3AP68431 AL512310.12-203ENST00000640543 90 ntBASIC-2.26□□□□□ -2.77
HIST1H3AP68431 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.27□□□□□ -2.77
HIST1H3AP68431 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.27□□□□□ -2.77
HIST1H3AP68431 RNU6-818P-201ENST00000364837 108 ntBASIC-2.27□□□□□ -2.77
HIST1H3AP68431 MIR548A1-201ENST00000385041 97 ntBASIC-2.27□□□□□ -2.77
HIST1H3AP68431 MT-TL1-201ENST00000386347 75 ntBASIC-2.27□□□□□ -2.77
HIST1H3AP68431 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.27□□□□□ -2.77
HIST1H3AP68431 Z83846.1-201ENST00000446798 265 ntBASIC-2.27□□□□□ -2.77
HIST1H3AP68431 snoU13.17-201ENST00000458802 104 ntBASIC-2.27□□□□□ -2.77
HIST1H3AP68431 RNA5SP272-201ENST00000516095 111 ntBASIC-2.27□□□□□ -2.77
HIST1H3AP68431 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.28□□□□□ -2.77
HIST1H3AP68431 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.28□□□□□ -2.77
HIST1H3AP68431 RNU6-983P-201ENST00000516004 103 ntBASIC-2.28□□□□□ -2.77
HIST1H3AP68431 Y_RNA.700-201ENST00000516806 100 ntBASIC-2.28□□□□□ -2.77
HIST1H3AP68431 RNU6-158P-201ENST00000517104 100 ntBASIC-2.28□□□□□ -2.77
HIST1H3AP68431 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.29□□□□□ -2.78
HIST1H3AP68431 RNU6-508P-201ENST00000363231 103 ntBASIC-2.29□□□□□ -2.78
HIST1H3AP68431 MIR203A-201ENST00000384836 110 ntBASIC-2.29□□□□□ -2.78
HIST1H3AP68431 AC018880.2-201ENST00000414265 201 ntBASIC-2.29□□□□□ -2.78
HIST1H3AP68431 SNORA63.2-201ENST00000362603 126 ntBASIC-2.3□□□□□ -2.78
HIST1H3AP68431 SNORD115-19-201ENST00000363098 82 ntBASIC-2.3□□□□□ -2.78
HIST1H3AP68431 SNORD115-18-201ENST00000363293 82 ntBASIC-2.3□□□□□ -2.78
HIST1H3AP68431 SNORD38.1-201ENST00000363863 68 ntBASIC-2.3□□□□□ -2.78
HIST1H3AP68431 SNORD115-17-201ENST00000364612 82 ntBASIC-2.3□□□□□ -2.78
HIST1H3AP68431 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.3□□□□□ -2.78
HIST1H3AP68431 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.3□□□□□ -2.78
HIST1H3AP68431 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.3□□□□□ -2.78
HIST1H3AP68431 RNU6-65P-201ENST00000516332 98 ntBASIC-2.3□□□□□ -2.78
HIST1H3AP68431 MIR4536-1-201ENST00000583537 88 ntBASIC-2.3□□□□□ -2.78
HIST1H3AP68431 RNU6-228P-201ENST00000362700 106 ntBASIC-2.31□□□□□ -2.78
HIST1H3AP68431 SNORD115-27-201ENST00000364430 82 ntBASIC-2.31□□□□□ -2.78
HIST1H3AP68431 RNU6-260P-201ENST00000384092 107 ntBASIC-2.31□□□□□ -2.78
HIST1H3AP68431 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.31□□□□□ -2.78
HIST1H3AP68431 MIR519A2-201ENST00000384990 87 ntBASIC-2.31□□□□□ -2.78
HIST1H3AP68431 Y_RNA.721-201ENST00000517207 102 ntBASIC-2.31□□□□□ -2.78
HIST1H3AP68431 MIR4282-201ENST00000583613 67 ntBASIC-2.31□□□□□ -2.78
HIST1H3AP68431 AL137067.1-201ENST00000615933 120 ntBASIC-2.31□□□□□ -2.78
HIST1H3AP68431 U2.14-201ENST00000615943 113 ntBASIC-2.31□□□□□ -2.78
HIST1H3AP68431 Y_RNA.197-201ENST00000364004 102 ntBASIC-2.32□□□□□ -2.78
HIST1H3AP68431 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.32□□□□□ -2.78
HIST1H3AP68431 MT-TI-201ENST00000387365 69 ntBASIC-2.32□□□□□ -2.78
HIST1H3AP68431 RNU6-400P-201ENST00000391173 106 ntBASIC-2.32□□□□□ -2.78
HIST1H3AP68431 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.32□□□□□ -2.78
HIST1H3AP68431 RNU6-1143P-201ENST00000516125 104 ntBASIC-2.32□□□□□ -2.78
HIST1H3AP68431 U7.5-201ENST00000517224 61 ntBASIC-2.32□□□□□ -2.78
HIST1H3AP68431 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.32□□□□□ -2.78
HIST1H3AP68431 RNU6-132P-201ENST00000383863 107 ntBASIC-2.33□□□□□ -2.78
HIST1H3AP68431 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.33□□□□□ -2.78
HIST1H3AP68431 AC021753.1-201ENST00000635724 168 ntBASIC-2.33□□□□□ -2.78
HIST1H3AP68431 MIR365A-201ENST00000362260 87 ntBASIC-2.34□□□□□ -2.78
HIST1H3AP68431 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.34□□□□□ -2.78
HIST1H3AP68431 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.34□□□□□ -2.78
HIST1H3AP68431 RNU6-774P-201ENST00000363238 107 ntBASIC-2.34□□□□□ -2.78
HIST1H3AP68431 SNORD18B-201ENST00000365659 72 ntBASIC-2.34□□□□□ -2.78
HIST1H3AP68431 SNORA24B-201ENST00000384176 131 ntBASIC-2.34□□□□□ -2.78
HIST1H3AP68431 RNU6-768P-201ENST00000384683 107 ntBASIC-2.34□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms