Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RNU7-24P-201ENST00000458867 62 ntBASIC-2.28□□□□□ -2.77
GTF2A1P52655 AL512310.12-203ENST00000640543 90 ntBASIC-2.28□□□□□ -2.77
GTF2A1P52655 SNORA63.2-201ENST00000362603 126 ntBASIC-2.29□□□□□ -2.78
GTF2A1P52655 RNU6-80P-201ENST00000384195 107 ntBASIC-2.29□□□□□ -2.78
GTF2A1P52655 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.29□□□□□ -2.78
GTF2A1P52655 SNORD116-2-201ENST00000384274 95 ntBASIC-2.29□□□□□ -2.78
GTF2A1P52655 MIR548A1-201ENST00000385041 97 ntBASIC-2.29□□□□□ -2.78
GTF2A1P52655 MIR1277-201ENST00000408536 78 ntBASIC-2.29□□□□□ -2.78
GTF2A1P52655 SNORD75.2-201ENST00000408784 58 ntBASIC-2.29□□□□□ -2.78
GTF2A1P52655 SNORA7.5-201ENST00000410672 110 ntBASIC-2.29□□□□□ -2.78
GTF2A1P52655 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-2.29□□□□□ -2.78
GTF2A1P52655 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.29□□□□□ -2.78
GTF2A1P52655 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.29□□□□□ -2.78
GTF2A1P52655 AC080013.6-201ENST00000606185 215 ntBASIC-2.29□□□□□ -2.78
GTF2A1P52655 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.3□□□□□ -2.78
GTF2A1P52655 Y_RNA.279-201ENST00000364763 95 ntBASIC-2.3□□□□□ -2.78
GTF2A1P52655 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.3□□□□□ -2.78
GTF2A1P52655 U4.2-201ENST00000618561 85 ntBASIC-2.3□□□□□ -2.78
GTF2A1P52655 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.31□□□□□ -2.78
GTF2A1P52655 SNORA33.1-201ENST00000364957 130 ntBASIC-2.31□□□□□ -2.78
GTF2A1P52655 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.31□□□□□ -2.78
GTF2A1P52655 SNORA24B-201ENST00000384176 131 ntBASIC-2.31□□□□□ -2.78
GTF2A1P52655 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.31□□□□□ -2.78
GTF2A1P52655 MT-TI-201ENST00000387365 69 ntBASIC-2.31□□□□□ -2.78
GTF2A1P52655 Y_RNA.644-201ENST00000459006 113 ntBASIC-2.31□□□□□ -2.78
GTF2A1P52655 MIR3140-201ENST00000583685 90 ntBASIC-2.31□□□□□ -2.78
GTF2A1P52655 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.32□□□□□ -2.78
GTF2A1P52655 AC108019.1-201ENST00000512540 175 ntBASIC-2.32□□□□□ -2.78
GTF2A1P52655 RNU6-976P-201ENST00000516086 111 ntBASIC-2.32□□□□□ -2.78
GTF2A1P52655 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.32□□□□□ -2.78
GTF2A1P52655 RNU6-65P-201ENST00000516332 98 ntBASIC-2.32□□□□□ -2.78
GTF2A1P52655 AL137067.1-201ENST00000615933 120 ntBASIC-2.32□□□□□ -2.78
GTF2A1P52655 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.32□□□□□ -2.78
GTF2A1P52655 RNU6-508P-201ENST00000363231 103 ntBASIC-2.33□□□□□ -2.78
GTF2A1P52655 RNU6-818P-201ENST00000364837 108 ntBASIC-2.33□□□□□ -2.78
GTF2A1P52655 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.33□□□□□ -2.78
GTF2A1P52655 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.33□□□□□ -2.78
GTF2A1P52655 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.33□□□□□ -2.78
GTF2A1P52655 MIR4282-201ENST00000583613 67 ntBASIC-2.33□□□□□ -2.78
GTF2A1P52655 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.34□□□□□ -2.78
GTF2A1P52655 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.34□□□□□ -2.78
GTF2A1P52655 Y_RNA.590-201ENST00000410140 107 ntBASIC-2.34□□□□□ -2.78
GTF2A1P52655 snoU13.17-201ENST00000458802 104 ntBASIC-2.34□□□□□ -2.78
GTF2A1P52655 RNU6-168P-201ENST00000516189 101 ntBASIC-2.34□□□□□ -2.78
GTF2A1P52655 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.34□□□□□ -2.78
GTF2A1P52655 AP002795.1-201ENST00000534879 84 ntBASIC-2.34□□□□□ -2.78
GTF2A1P52655 CYP3A54P-201ENST00000566950 75 ntBASIC-2.34□□□□□ -2.78
GTF2A1P52655 MIR3163-201ENST00000581592 73 ntBASIC-2.34□□□□□ -2.78
GTF2A1P52655 MIR4490-201ENST00000582647 84 ntBASIC-2.34□□□□□ -2.78
GTF2A1P52655 MIR4536-1-201ENST00000583537 88 ntBASIC-2.34□□□□□ -2.78
GTF2A1P52655 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.35□□□□□ -2.79
GTF2A1P52655 RNU6-770P-201ENST00000363929 105 ntBASIC-2.35□□□□□ -2.79
GTF2A1P52655 Y_RNA.288-201ENST00000364854 92 ntBASIC-2.35□□□□□ -2.79
GTF2A1P52655 SNORD114-3-201ENST00000364969 75 ntBASIC-2.35□□□□□ -2.79
GTF2A1P52655 MIR1252-201ENST00000408861 65 ntBASIC-2.35□□□□□ -2.79
GTF2A1P52655 Z83846.1-201ENST00000446798 265 ntBASIC-2.35□□□□□ -2.79
GTF2A1P52655 RNU6-732P-201ENST00000516033 103 ntBASIC-2.35□□□□□ -2.79
GTF2A1P52655 RNY3P15-201ENST00000516297 97 ntBASIC-2.35□□□□□ -2.79
GTF2A1P52655 SNORA40.15-201ENST00000516884 107 ntBASIC-2.35□□□□□ -2.79
GTF2A1P52655 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.35□□□□□ -2.79
GTF2A1P52655 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.36□□□□□ -2.79
GTF2A1P52655 RNU6-806P-201ENST00000365147 105 ntBASIC-2.36□□□□□ -2.79
GTF2A1P52655 RNU6-768P-201ENST00000384683 107 ntBASIC-2.36□□□□□ -2.79
GTF2A1P52655 ELOCP20-201ENST00000422460 345 ntBASIC-2.36□□□□□ -2.79
GTF2A1P52655 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.36□□□□□ -2.79
GTF2A1P52655 RNU7-154P-201ENST00000516194 62 ntBASIC-2.36□□□□□ -2.79
GTF2A1P52655 MIR4760-201ENST00000585040 80 ntBASIC-2.36□□□□□ -2.79
GTF2A1P52655 MIR5683-201ENST00000636514 76 ntBASIC-2.36□□□□□ -2.79
GTF2A1P52655 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.37□□□□□ -2.79
GTF2A1P52655 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.37□□□□□ -2.79
GTF2A1P52655 RNY4P6-201ENST00000363667 96 ntBASIC-2.37□□□□□ -2.79
GTF2A1P52655 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.37□□□□□ -2.79
GTF2A1P52655 RNU6-132P-201ENST00000383863 107 ntBASIC-2.37□□□□□ -2.79
GTF2A1P52655 RNU6-823P-201ENST00000391042 103 ntBASIC-2.37□□□□□ -2.79
GTF2A1P52655 RNU6-400P-201ENST00000391173 106 ntBASIC-2.37□□□□□ -2.79
GTF2A1P52655 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.37□□□□□ -2.79
GTF2A1P52655 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.37□□□□□ -2.79
GTF2A1P52655 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.37□□□□□ -2.79
GTF2A1P52655 RNU6-718P-201ENST00000516166 105 ntBASIC-2.37□□□□□ -2.79
GTF2A1P52655 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.37□□□□□ -2.79
GTF2A1P52655 AC021753.1-201ENST00000635724 168 ntBASIC-2.37□□□□□ -2.79
GTF2A1P52655 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.38□□□□□ -2.79
GTF2A1P52655 RNU6-309P-201ENST00000364573 106 ntBASIC-2.38□□□□□ -2.79
GTF2A1P52655 RNU6-450P-201ENST00000364654 107 ntBASIC-2.38□□□□□ -2.79
GTF2A1P52655 RNU6-260P-201ENST00000384092 107 ntBASIC-2.38□□□□□ -2.79
GTF2A1P52655 SNORD116-1-201ENST00000384335 95 ntBASIC-2.38□□□□□ -2.79
GTF2A1P52655 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.38□□□□□ -2.79
GTF2A1P52655 AC090616.4-201ENST00000448026 115 ntBASIC-2.38□□□□□ -2.79
GTF2A1P52655 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.38□□□□□ -2.79
GTF2A1P52655 RNU6-277P-201ENST00000516272 106 ntBASIC-2.38□□□□□ -2.79
GTF2A1P52655 Y_RNA.679-201ENST00000516416 91 ntBASIC-2.38□□□□□ -2.79
GTF2A1P52655 RNA5SP147-201ENST00000516493 109 ntBASIC-2.38□□□□□ -2.79
GTF2A1P52655 Y_RNA.688-201ENST00000516565 95 ntBASIC-2.38□□□□□ -2.79
GTF2A1P52655 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.38□□□□□ -2.79
GTF2A1P52655 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.39□□□□□ -2.79
GTF2A1P52655 Y_RNA.194-201ENST00000363985 102 ntBASIC-2.39□□□□□ -2.79
GTF2A1P52655 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.39□□□□□ -2.79
GTF2A1P52655 MTND5P22-201ENST00000458380 195 ntBASIC-2.39□□□□□ -2.79
GTF2A1P52655 RNU7-85P-201ENST00000458851 63 ntBASIC-2.39□□□□□ -2.79
GTF2A1P52655 MIR4756-201ENST00000577874 78 ntBASIC-2.39□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 573.7 ms