Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 RNU6-682P-201ENST00000363843 106 ntBASIC-1.25□□□□□ -2.61
COL6A3P12111 SNORD116-11-201ENST00000383882 92 ntBASIC-1.25□□□□□ -2.61
COL6A3P12111 MIR628-201ENST00000385229 95 ntBASIC-1.25□□□□□ -2.61
COL6A3P12111 AC005014.2-201ENST00000607795 599 ntBASIC-1.25□□□□□ -2.61
COL6A3P12111 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.26□□□□□ -2.61
COL6A3P12111 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.26□□□□□ -2.61
COL6A3P12111 RNU6-906P-201ENST00000384700 70 ntBASIC-1.26□□□□□ -2.61
COL6A3P12111 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.26□□□□□ -2.61
COL6A3P12111 SNORA75-201ENST00000384158 137 ntBASIC-1.26□□□□□ -2.61
COL6A3P12111 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.26□□□□□ -2.61
COL6A3P12111 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.26□□□□□ -2.61
COL6A3P12111 AC005899.2-201ENST00000584353 90 ntBASIC-1.26□□□□□ -2.61
COL6A3P12111 AC021753.1-201ENST00000635724 168 ntBASIC-1.26□□□□□ -2.61
COL6A3P12111 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.26□□□□□ -2.61
COL6A3P12111 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.26□□□□□ -2.61
COL6A3P12111 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.26□□□□□ -2.61
COL6A3P12111 RNU6-519P-201ENST00000410590 108 ntBASIC-1.26□□□□□ -2.61
COL6A3P12111 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.26□□□□□ -2.61
COL6A3P12111 AC018645.2-201ENST00000609151 472 ntBASIC-1.26□□□□□ -2.61
COL6A3P12111 U2.18-201ENST00000622185 84 ntBASIC-1.26□□□□□ -2.61
COL6A3P12111 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.27□□□□□ -2.61
COL6A3P12111 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.27□□□□□ -2.61
COL6A3P12111 SNORD50.2-201ENST00000365465 70 ntBASIC-1.27□□□□□ -2.61
COL6A3P12111 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.27□□□□□ -2.61
COL6A3P12111 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-1.27□□□□□ -2.61
COL6A3P12111 RNA5SP236-201ENST00000516169 116 ntBASIC-1.27□□□□□ -2.61
COL6A3P12111 RNU7-6P-201ENST00000516845 62 ntBASIC-1.27□□□□□ -2.61
COL6A3P12111 AC073114.1-201ENST00000612027 490 ntBASIC-1.27□□□□□ -2.61
COL6A3P12111 MIR6863-201ENST00000636112 90 ntBASIC-1.27□□□□□ -2.61
COL6A3P12111 RNU6-681P-201ENST00000364012 104 ntBASIC-1.27□□□□□ -2.61
COL6A3P12111 SNORA69.1-201ENST00000390904 137 ntBASIC-1.27□□□□□ -2.61
COL6A3P12111 AC009161.1-201ENST00000417306 376 ntBASIC-1.27□□□□□ -2.61
COL6A3P12111 RNU6-561P-201ENST00000516222 102 ntBASIC-1.27□□□□□ -2.61
COL6A3P12111 RNU6-500P-201ENST00000362349 107 ntBASIC-1.28□□□□□ -2.61
COL6A3P12111 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.28□□□□□ -2.61
COL6A3P12111 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.28□□□□□ -2.61
COL6A3P12111 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.28□□□□□ -2.61
COL6A3P12111 MIR548I1-201ENST00000408810 149 ntBASIC-1.28□□□□□ -2.61
COL6A3P12111 RNU6-648P-201ENST00000410190 107 ntBASIC-1.28□□□□□ -2.61
COL6A3P12111 RNU6-358P-201ENST00000516564 75 ntBASIC-1.28□□□□□ -2.61
COL6A3P12111 Y_RNA.15-201ENST00000362420 102 ntBASIC-1.28□□□□□ -2.61
COL6A3P12111 SNORD38.1-201ENST00000363863 68 ntBASIC-1.28□□□□□ -2.61
COL6A3P12111 RNU6-694P-201ENST00000364071 147 ntBASIC-1.28□□□□□ -2.61
COL6A3P12111 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.28□□□□□ -2.61
COL6A3P12111 MIR548C-201ENST00000384815 97 ntBASIC-1.28□□□□□ -2.61
COL6A3P12111 SNORD4B-201ENST00000459083 72 ntBASIC-1.28□□□□□ -2.61
COL6A3P12111 RNU7-164P-201ENST00000459221 62 ntBASIC-1.28□□□□□ -2.61
COL6A3P12111 MIR6128-201ENST00000615528 109 ntBASIC-1.28□□□□□ -2.61
COL6A3P12111 SNORD18C-201ENST00000362704 69 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 SNORD115-31-201ENST00000365318 82 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 MT-TH-201ENST00000387441 69 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 RNU6-129P-201ENST00000391022 107 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 RNU6-373P-201ENST00000411247 98 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 RNU6-656P-201ENST00000516785 107 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 RNU6-912P-201ENST00000363800 104 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 RNU6-151P-201ENST00000364158 107 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.29□□□□□ -2.62
COL6A3P12111 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 RNU6-507P-201ENST00000516045 100 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.29□□□□□ -2.62
COL6A3P12111 AL132765.2-201ENST00000610812 351 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.29□□□□□ -2.62
COL6A3P12111 RNA5SP292-201ENST00000390974 118 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 RNU6-995P-201ENST00000391244 107 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 AC013734.1-201ENST00000619329 111 ntBASIC-1.29□□□□□ -2.62
COL6A3P12111 RNU6-309P-201ENST00000364573 106 ntBASIC-1.3□□□□□ -2.62
COL6A3P12111 RNU6-645P-201ENST00000364649 106 ntBASIC-1.3□□□□□ -2.62
COL6A3P12111 RNU6-1257P-201ENST00000384625 110 ntBASIC-1.3□□□□□ -2.62
COL6A3P12111 MTND1P1-201ENST00000445453 368 ntBASIC-1.3□□□□□ -2.62
COL6A3P12111 RNU6-764P-201ENST00000516396 105 ntBASIC-1.3□□□□□ -2.62
COL6A3P12111 MIR3646-201ENST00000578301 84 ntBASIC-1.3□□□□□ -2.62
COL6A3P12111 MIR3064-201ENST00000581130 66 ntBASIC-1.3□□□□□ -2.62
COL6A3P12111 MTND5P26-201ENST00000426018 1752 ntBASIC-1.3□□□□□ -2.62
COL6A3P12111 RNU6-636P-201ENST00000384598 107 ntBASIC-1.3□□□□□ -2.62
COL6A3P12111 U2.1-201ENST00000618978 145 ntBASIC-1.3□□□□□ -2.62
COL6A3P12111 RNY1P1-201ENST00000364372 112 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 MT-TW-201ENST00000387382 68 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 NBR2-204ENST00000587322 63 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 snoU18.1-201ENST00000629629 71 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 RNU6-643P-201ENST00000384018 107 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 MIR759-201ENST00000390224 91 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 SNORA20.3-201ENST00000516880 132 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 AL513043.2-201ENST00000573941 143 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 U2.7-201ENST00000619197 100 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 MIR3662-201ENST00000637030 95 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 RNU6-340P-201ENST00000364005 107 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 SNORA7.5-201ENST00000410672 110 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.31□□□□□ -2.62
COL6A3P12111 RNY3P3-201ENST00000363816 102 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 471.1 ms