Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RNU1-123P-201ENST00000458950 160 ntBASIC2□□□□□ -2.09
CSB-PGBD3P0DP91 SNORD79.1-201ENST00000516069 84 ntBASIC2□□□□□ -2.09
CSB-PGBD3P0DP91 RNU7-40P-201ENST00000516397 64 ntBASIC2□□□□□ -2.09
CSB-PGBD3P0DP91 U6.81-201ENST00000612550 106 ntBASIC2□□□□□ -2.09
CSB-PGBD3P0DP91 AL353770.2-201ENST00000620024 78 ntBASIC2□□□□□ -2.09
CSB-PGBD3P0DP91 AC097510.1-201ENST00000510945 133 ntBASIC1.99□□□□□ -2.09
CSB-PGBD3P0DP91 RNA5SP102-201ENST00000516865 106 ntBASIC1.99□□□□□ -2.09
CSB-PGBD3P0DP91 AC023827.1-201ENST00000569247 97 ntBASIC1.99□□□□□ -2.09
CSB-PGBD3P0DP91 MIR3675-201ENST00000583661 73 ntBASIC1.99□□□□□ -2.09
CSB-PGBD3P0DP91 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
CSB-PGBD3P0DP91 SNORD45A-201ENST00000384512 84 ntBASIC1.98□□□□□ -2.09
CSB-PGBD3P0DP91 RNU6-535P-201ENST00000384722 107 ntBASIC1.98□□□□□ -2.09
CSB-PGBD3P0DP91 RNU7-90P-201ENST00000459216 62 ntBASIC1.98□□□□□ -2.09
CSB-PGBD3P0DP91 MIR4676-201ENST00000583078 72 ntBASIC1.98□□□□□ -2.09
CSB-PGBD3P0DP91 AC005520.4-201ENST00000604337 90 ntBASIC1.98□□□□□ -2.09
CSB-PGBD3P0DP91 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CSB-PGBD3P0DP91 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.98□□□□□ -2.09
CSB-PGBD3P0DP91 MIR1304-201ENST00000408243 91 ntBASIC1.97□□□□□ -2.09
CSB-PGBD3P0DP91 MIR4452-201ENST00000583004 71 ntBASIC1.97□□□□□ -2.09
CSB-PGBD3P0DP91 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CSB-PGBD3P0DP91 RNU6-681P-201ENST00000364012 104 ntBASIC1.96□□□□□ -2.1
CSB-PGBD3P0DP91 MIR222-201ENST00000384992 110 ntBASIC1.96□□□□□ -2.1
CSB-PGBD3P0DP91 SNORD111-201ENST00000408139 94 ntBASIC1.96□□□□□ -2.1
CSB-PGBD3P0DP91 RPS26P5-201ENST00000418544 335 ntBASIC1.96□□□□□ -2.1
CSB-PGBD3P0DP91 AC106800.4-201ENST00000614905 153 ntBASIC1.96□□□□□ -2.1
CSB-PGBD3P0DP91 RNU6-369P-201ENST00000362515 102 ntBASIC1.95□□□□□ -2.1
CSB-PGBD3P0DP91 Y_RNA.258-201ENST00000364613 105 ntBASIC1.95□□□□□ -2.1
CSB-PGBD3P0DP91 RNU6-471P-201ENST00000383944 106 ntBASIC1.95□□□□□ -2.1
CSB-PGBD3P0DP91 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.95□□□□□ -2.1
CSB-PGBD3P0DP91 RNA5SP327-201ENST00000362494 101 ntBASIC1.94□□□□□ -2.1
CSB-PGBD3P0DP91 SNORD45.1-201ENST00000363181 77 ntBASIC1.94□□□□□ -2.1
CSB-PGBD3P0DP91 SNORD115-22-201ENST00000364456 82 ntBASIC1.94□□□□□ -2.1
CSB-PGBD3P0DP91 RNU6-287P-201ENST00000516230 98 ntBASIC1.94□□□□□ -2.1
CSB-PGBD3P0DP91 AC008608.1-201ENST00000603910 127 ntBASIC1.94□□□□□ -2.1
CSB-PGBD3P0DP91 MIR6078-201ENST00000611069 100 ntBASIC1.94□□□□□ -2.1
CSB-PGBD3P0DP91 SNORD12-201ENST00000391002 90 ntBASIC1.93□□□□□ -2.1
CSB-PGBD3P0DP91 RNU7-102P-201ENST00000458948 62 ntBASIC1.93□□□□□ -2.1
CSB-PGBD3P0DP91 MIR3122-201ENST00000577243 73 ntBASIC1.93□□□□□ -2.1
CSB-PGBD3P0DP91 AL078603.1-201ENST00000603824 313 ntBASIC1.93□□□□□ -2.1
CSB-PGBD3P0DP91 RNU6-364P-201ENST00000384387 107 ntBASIC1.92□□□□□ -2.1
CSB-PGBD3P0DP91 RNU6-630P-201ENST00000391258 106 ntBASIC1.92□□□□□ -2.1
CSB-PGBD3P0DP91 AC244505.6-201ENST00000452829 130 ntBASIC1.92□□□□□ -2.1
CSB-PGBD3P0DP91 AC027335.2-201ENST00000624030 375 ntBASIC1.92□□□□□ -2.1
CSB-PGBD3P0DP91 SNORA25-201ENST00000384384 134 ntBASIC1.91□□□□□ -2.1
CSB-PGBD3P0DP91 MIR9-2-201ENST00000384838 87 ntBASIC1.91□□□□□ -2.1
CSB-PGBD3P0DP91 RNU6-1177P-201ENST00000391058 104 ntBASIC1.91□□□□□ -2.1
CSB-PGBD3P0DP91 RNU6-881P-201ENST00000516813 102 ntBASIC1.91□□□□□ -2.1
CSB-PGBD3P0DP91 MIR4773-1-201ENST00000637203 78 ntBASIC1.91□□□□□ -2.1
CSB-PGBD3P0DP91 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CSB-PGBD3P0DP91 RNU6-382P-201ENST00000365181 106 ntBASIC1.9□□□□□ -2.11
CSB-PGBD3P0DP91 SNORD114-22-201ENST00000365423 72 ntBASIC1.9□□□□□ -2.11
CSB-PGBD3P0DP91 RNU6-895P-201ENST00000384125 103 ntBASIC1.9□□□□□ -2.11
CSB-PGBD3P0DP91 RNU6-604P-201ENST00000390917 100 ntBASIC1.9□□□□□ -2.11
CSB-PGBD3P0DP91 MIR938-201ENST00000401216 83 ntBASIC1.9□□□□□ -2.11
CSB-PGBD3P0DP91 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.9□□□□□ -2.11
CSB-PGBD3P0DP91 RNU6-42P-201ENST00000384165 107 ntBASIC1.89□□□□□ -2.11
CSB-PGBD3P0DP91 SNORD116-24-201ENST00000384549 92 ntBASIC1.89□□□□□ -2.11
CSB-PGBD3P0DP91 RNU6-994P-201ENST00000410507 111 ntBASIC1.89□□□□□ -2.11
CSB-PGBD3P0DP91 MIR4804-201ENST00000581683 73 ntBASIC1.89□□□□□ -2.11
CSB-PGBD3P0DP91 MIR6734-201ENST00000621166 68 ntBASIC1.89□□□□□ -2.11
CSB-PGBD3P0DP91 RNA5SP363-201ENST00000365072 115 ntBASIC1.88□□□□□ -2.11
CSB-PGBD3P0DP91 Y_RNA.443-201ENST00000384135 111 ntBASIC1.88□□□□□ -2.11
CSB-PGBD3P0DP91 SNORD113.1-201ENST00000363280 73 ntBASIC1.87□□□□□ -2.11
CSB-PGBD3P0DP91 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CSB-PGBD3P0DP91 AC002429.1-201ENST00000437672 148 ntBASIC1.87□□□□□ -2.11
CSB-PGBD3P0DP91 RNU7-56P-201ENST00000458744 62 ntBASIC1.87□□□□□ -2.11
CSB-PGBD3P0DP91 RNU6-1057P-201ENST00000517162 102 ntBASIC1.87□□□□□ -2.11
CSB-PGBD3P0DP91 MIR548AG2-201ENST00000581228 64 ntBASIC1.87□□□□□ -2.11
CSB-PGBD3P0DP91 MIR8053-201ENST00000613344 75 ntBASIC1.87□□□□□ -2.11
CSB-PGBD3P0DP91 Y_RNA.32-201ENST00000362589 110 ntBASIC1.86□□□□□ -2.11
CSB-PGBD3P0DP91 SNORD26-201ENST00000384147 75 ntBASIC1.86□□□□□ -2.11
CSB-PGBD3P0DP91 RNA5SP220-201ENST00000516298 104 ntBASIC1.86□□□□□ -2.11
CSB-PGBD3P0DP91 SNORA31.14-201ENST00000516728 116 ntBASIC1.86□□□□□ -2.11
CSB-PGBD3P0DP91 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.86□□□□□ -2.11
CSB-PGBD3P0DP91 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CSB-PGBD3P0DP91 SNORA25.4-201ENST00000363666 124 ntBASIC1.85□□□□□ -2.11
CSB-PGBD3P0DP91 RMST_2.1-201ENST00000617263 136 ntBASIC1.85□□□□□ -2.11
CSB-PGBD3P0DP91 U3.27-201ENST00000391237 200 ntBASIC1.84□□□□□ -2.11
CSB-PGBD3P0DP91 AC093423.1-201ENST00000440817 142 ntBASIC1.84□□□□□ -2.11
CSB-PGBD3P0DP91 RNU6-274P-201ENST00000459566 107 ntBASIC1.84□□□□□ -2.11
CSB-PGBD3P0DP91 RNU6-977P-201ENST00000516411 103 ntBASIC1.84□□□□□ -2.11
CSB-PGBD3P0DP91 uc_338.16-201ENST00000621804 95 ntBASIC1.84□□□□□ -2.11
CSB-PGBD3P0DP91 RNU6-1216P-201ENST00000362590 107 ntBASIC1.83□□□□□ -2.12
CSB-PGBD3P0DP91 AC244098.3-201ENST00000424803 96 ntBASIC1.83□□□□□ -2.12
CSB-PGBD3P0DP91 RNU7-13P-201ENST00000516413 62 ntBASIC1.83□□□□□ -2.12
CSB-PGBD3P0DP91 AL109933.3-201ENST00000619095 188 ntBASIC1.83□□□□□ -2.12
CSB-PGBD3P0DP91 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CSB-PGBD3P0DP91 MIR96-201ENST00000362288 78 ntBASIC1.82□□□□□ -2.12
CSB-PGBD3P0DP91 SNORD115-24-201ENST00000363528 82 ntBASIC1.82□□□□□ -2.12
CSB-PGBD3P0DP91 RNA5SP403-201ENST00000363598 108 ntBASIC1.82□□□□□ -2.12
CSB-PGBD3P0DP91 SNORD115-44-201ENST00000365391 82 ntBASIC1.82□□□□□ -2.12
CSB-PGBD3P0DP91 RNU6-1126P-201ENST00000384002 107 ntBASIC1.82□□□□□ -2.12
CSB-PGBD3P0DP91 RNU7-161P-201ENST00000517289 62 ntBASIC1.82□□□□□ -2.12
CSB-PGBD3P0DP91 RNU6-997P-201ENST00000384725 107 ntBASIC1.81□□□□□ -2.12
CSB-PGBD3P0DP91 MIR100-201ENST00000385259 80 ntBASIC1.81□□□□□ -2.12
CSB-PGBD3P0DP91 RNU1-119P-201ENST00000391122 165 ntBASIC1.81□□□□□ -2.12
CSB-PGBD3P0DP91 AC067940.1-201ENST00000458411 300 ntBASIC1.81□□□□□ -2.12
CSB-PGBD3P0DP91 RPS29P23-201ENST00000458635 123 ntBASIC1.81□□□□□ -2.12
CSB-PGBD3P0DP91 MIR3920-201ENST00000581751 86 ntBASIC1.81□□□□□ -2.12
CSB-PGBD3P0DP91 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms