Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MIR451A-201ENST00000385059 72 ntBASIC-1.18□□□□□ -2.6
UPK1BO75841 AC022559.1-201ENST00000520905 205 ntBASIC-1.18□□□□□ -2.6
UPK1BO75841 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.18□□□□□ -2.6
UPK1BO75841 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.19□□□□□ -2.6
UPK1BO75841 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.19□□□□□ -2.6
UPK1BO75841 MIR759-201ENST00000390224 91 ntBASIC-1.19□□□□□ -2.6
UPK1BO75841 AL353813.1-201ENST00000440700 253 ntBASIC-1.19□□□□□ -2.6
UPK1BO75841 RNU4-71P-201ENST00000516258 113 ntBASIC-1.19□□□□□ -2.6
UPK1BO75841 RNU7-121P-201ENST00000516604 62 ntBASIC-1.19□□□□□ -2.6
UPK1BO75841 MIR8068-201ENST00000618032 68 ntBASIC-1.19□□□□□ -2.6
UPK1BO75841 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.2□□□□□ -2.6
UPK1BO75841 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.2□□□□□ -2.6
UPK1BO75841 RNU6-24P-201ENST00000384440 107 ntBASIC-1.2□□□□□ -2.6
UPK1BO75841 MIR517B-201ENST00000385102 67 ntBASIC-1.2□□□□□ -2.6
UPK1BO75841 RN7SKP19-201ENST00000516016 252 ntBASIC-1.2□□□□□ -2.6
UPK1BO75841 MIR6854-201ENST00000614935 69 ntBASIC-1.2□□□□□ -2.6
UPK1BO75841 RNU6-363P-201ENST00000362895 105 ntBASIC-1.21□□□□□ -2.6
UPK1BO75841 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.21□□□□□ -2.6
UPK1BO75841 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.21□□□□□ -2.6
UPK1BO75841 RNU6-10P-201ENST00000384036 107 ntBASIC-1.21□□□□□ -2.6
UPK1BO75841 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.21□□□□□ -2.6
UPK1BO75841 AP000533.3-201ENST00000447704 118 ntBASIC-1.21□□□□□ -2.6
UPK1BO75841 AC022137.1-201ENST00000483735 151 ntBASIC-1.21□□□□□ -2.6
UPK1BO75841 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.21□□□□□ -2.6
UPK1BO75841 RNA5SP395-201ENST00000516567 118 ntBASIC-1.21□□□□□ -2.6
UPK1BO75841 MIR3121-201ENST00000579680 77 ntBASIC-1.21□□□□□ -2.6
UPK1BO75841 MIR3128-201ENST00000581957 66 ntBASIC-1.21□□□□□ -2.6
UPK1BO75841 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.22□□□□□ -2.6
UPK1BO75841 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.22□□□□□ -2.6
UPK1BO75841 MIR548D2-201ENST00000384955 97 ntBASIC-1.22□□□□□ -2.6
UPK1BO75841 MIR1263-201ENST00000408324 86 ntBASIC-1.22□□□□□ -2.6
UPK1BO75841 SNORD42B-201ENST00000458893 67 ntBASIC-1.22□□□□□ -2.6
UPK1BO75841 AL117187.1-201ENST00000555482 181 ntBASIC-1.22□□□□□ -2.6
UPK1BO75841 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.23□□□□□ -2.61
UPK1BO75841 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.23□□□□□ -2.61
UPK1BO75841 SNORD114-4-201ENST00000363962 75 ntBASIC-1.23□□□□□ -2.61
UPK1BO75841 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.23□□□□□ -2.61
UPK1BO75841 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.23□□□□□ -2.61
UPK1BO75841 RNU6-111P-201ENST00000517179 105 ntBASIC-1.23□□□□□ -2.61
UPK1BO75841 AC140658.3-201ENST00000567603 271 ntBASIC-1.23□□□□□ -2.61
UPK1BO75841 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.24□□□□□ -2.61
UPK1BO75841 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.24□□□□□ -2.61
UPK1BO75841 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.24□□□□□ -2.61
UPK1BO75841 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.24□□□□□ -2.61
UPK1BO75841 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.24□□□□□ -2.61
UPK1BO75841 SCARNA18B-201ENST00000458806 135 ntBASIC-1.24□□□□□ -2.61
UPK1BO75841 RNU6-719P-201ENST00000516671 104 ntBASIC-1.24□□□□□ -2.61
UPK1BO75841 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.25□□□□□ -2.61
UPK1BO75841 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.25□□□□□ -2.61
UPK1BO75841 RNU6-867P-201ENST00000364956 107 ntBASIC-1.25□□□□□ -2.61
UPK1BO75841 RNU6-409P-201ENST00000384114 104 ntBASIC-1.25□□□□□ -2.61
UPK1BO75841 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.25□□□□□ -2.61
UPK1BO75841 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.25□□□□□ -2.61
UPK1BO75841 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.25□□□□□ -2.61
UPK1BO75841 AC008737.2-201ENST00000599446 118 ntBASIC-1.25□□□□□ -2.61
UPK1BO75841 snoR1.1-201ENST00000628177 80 ntBASIC-1.25□□□□□ -2.61
UPK1BO75841 RNU6-915P-201ENST00000364943 103 ntBASIC-1.26□□□□□ -2.61
UPK1BO75841 RNY4P3-201ENST00000365254 95 ntBASIC-1.26□□□□□ -2.61
UPK1BO75841 RNU6-460P-201ENST00000391158 108 ntBASIC-1.26□□□□□ -2.61
UPK1BO75841 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.26□□□□□ -2.61
UPK1BO75841 AC130289.1-201ENST00000577321 73 ntBASIC-1.26□□□□□ -2.61
UPK1BO75841 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.27□□□□□ -2.61
UPK1BO75841 RNA5SP192-201ENST00000364404 120 ntBASIC-1.27□□□□□ -2.61
UPK1BO75841 RNU4-11P-201ENST00000365287 132 ntBASIC-1.27□□□□□ -2.61
UPK1BO75841 RNU6-905P-201ENST00000384434 107 ntBASIC-1.27□□□□□ -2.61
UPK1BO75841 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.27□□□□□ -2.61
UPK1BO75841 U3.27-201ENST00000391237 200 ntBASIC-1.27□□□□□ -2.61
UPK1BO75841 RNU6-75P-201ENST00000515944 104 ntBASIC-1.27□□□□□ -2.61
UPK1BO75841 MIR4306-201ENST00000583390 91 ntBASIC-1.27□□□□□ -2.61
UPK1BO75841 AL442128.1-201ENST00000615151 90 ntBASIC-1.27□□□□□ -2.61
UPK1BO75841 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.27□□□□□ -2.61
UPK1BO75841 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.28□□□□□ -2.61
UPK1BO75841 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.28□□□□□ -2.61
UPK1BO75841 MIR587-201ENST00000384845 96 ntBASIC-1.28□□□□□ -2.61
UPK1BO75841 RNA5SP136-201ENST00000410906 107 ntBASIC-1.28□□□□□ -2.61
UPK1BO75841 FGF7P7-201ENST00000514120 227 ntBASIC-1.28□□□□□ -2.61
UPK1BO75841 MIR3115-201ENST00000577915 68 ntBASIC-1.28□□□□□ -2.61
UPK1BO75841 MIR3165-201ENST00000579874 75 ntBASIC-1.28□□□□□ -2.61
UPK1BO75841 MIR6773-201ENST00000612812 74 ntBASIC-1.28□□□□□ -2.61
UPK1BO75841 AC141273.2-201ENST00000618989 130 ntBASIC-1.28□□□□□ -2.61
UPK1BO75841 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.29□□□□□ -2.62
UPK1BO75841 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.29□□□□□ -2.62
UPK1BO75841 SNORD74.6-201ENST00000364796 70 ntBASIC-1.29□□□□□ -2.62
UPK1BO75841 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.29□□□□□ -2.62
UPK1BO75841 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.29□□□□□ -2.62
UPK1BO75841 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.29□□□□□ -2.62
UPK1BO75841 RNU7-197P-201ENST00000458836 62 ntBASIC-1.29□□□□□ -2.62
UPK1BO75841 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.29□□□□□ -2.62
UPK1BO75841 MIR6086-201ENST00000638065 55 ntBASIC-1.29□□□□□ -2.62
UPK1BO75841 SNORA20.1-201ENST00000364790 130 ntBASIC-1.3□□□□□ -2.62
UPK1BO75841 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.3□□□□□ -2.62
UPK1BO75841 MIR606-201ENST00000384851 96 ntBASIC-1.3□□□□□ -2.62
UPK1BO75841 SNORD64-201ENST00000386683 67 ntBASIC-1.3□□□□□ -2.62
UPK1BO75841 RNU6-431P-201ENST00000383874 107 ntBASIC-1.31□□□□□ -2.62
UPK1BO75841 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.31□□□□□ -2.62
UPK1BO75841 RNU6-592P-201ENST00000411333 103 ntBASIC-1.31□□□□□ -2.62
UPK1BO75841 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.31□□□□□ -2.62
UPK1BO75841 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.31□□□□□ -2.62
UPK1BO75841 AC025521.1-201ENST00000621624 286 ntBASIC-1.31□□□□□ -2.62
UPK1BO75841 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms