Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC025166.1-201ENST00000612411 163 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 MIR7110-201ENST00000612638 86 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 RNU6-845P-201ENST00000362578 103 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 SNORA24B-201ENST00000384176 131 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 RNU6-769P-201ENST00000384407 104 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 RNA5SP153-201ENST00000516498 76 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 MIR4317-201ENST00000637586 65 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.39□□□□□ -2.63
USH2AO75445 RNU6-810P-201ENST00000364001 107 ntBASIC-1.39□□□□□ -2.63
USH2AO75445 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.39□□□□□ -2.63
USH2AO75445 MIR5692C1-201ENST00000585309 91 ntBASIC-1.39□□□□□ -2.63
USH2AO75445 RNU6-986P-201ENST00000363133 102 ntBASIC-1.39□□□□□ -2.63
USH2AO75445 RNA5SP292-201ENST00000390974 118 ntBASIC-1.39□□□□□ -2.63
USH2AO75445 AL590623.1-201ENST00000427864 105 ntBASIC-1.39□□□□□ -2.63
USH2AO75445 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.39□□□□□ -2.63
USH2AO75445 MTCO2P30-201ENST00000503662 364 ntBASIC-1.39□□□□□ -2.63
USH2AO75445 MIR3144-201ENST00000579460 79 ntBASIC-1.39□□□□□ -2.63
USH2AO75445 SNORD50.2-201ENST00000365465 70 ntBASIC-1.39□□□□□ -2.63
USH2AO75445 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.39□□□□□ -2.63
USH2AO75445 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.39□□□□□ -2.63
USH2AO75445 MIR34C-201ENST00000384831 77 ntBASIC-1.39□□□□□ -2.63
USH2AO75445 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.39□□□□□ -2.63
USH2AO75445 MIR624-201ENST00000385217 97 ntBASIC-1.4□□□□□ -2.63
USH2AO75445 MTCO2P4-201ENST00000517968 247 ntBASIC-1.4□□□□□ -2.63
USH2AO75445 AC084782.3-201ENST00000612282 578 ntBASIC-1.4□□□□□ -2.63
USH2AO75445 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
USH2AO75445 RNU6-891P-201ENST00000384280 111 ntBASIC-1.4□□□□□ -2.63
USH2AO75445 RNU6-1005P-201ENST00000384519 107 ntBASIC-1.4□□□□□ -2.63
USH2AO75445 MIR1-2-201ENST00000384961 85 ntBASIC-1.4□□□□□ -2.63
USH2AO75445 AL593851.1-201ENST00000426171 157 ntBASIC-1.4□□□□□ -2.63
USH2AO75445 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.4□□□□□ -2.63
USH2AO75445 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.4□□□□□ -2.63
USH2AO75445 RNU6-892P-201ENST00000410335 99 ntBASIC-1.4□□□□□ -2.63
USH2AO75445 SNORD77.4-201ENST00000516158 81 ntBASIC-1.4□□□□□ -2.63
USH2AO75445 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.41□□□□□ -2.63
USH2AO75445 RNU6-82P-201ENST00000363970 107 ntBASIC-1.41□□□□□ -2.63
USH2AO75445 MTND4LP25-201ENST00000570218 163 ntBASIC-1.41□□□□□ -2.63
USH2AO75445 AC005014.2-201ENST00000607795 599 ntBASIC-1.41□□□□□ -2.63
USH2AO75445 MIR320C1-201ENST00000408566 88 ntBASIC-1.41□□□□□ -2.63
USH2AO75445 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.41□□□□□ -2.63
USH2AO75445 AC123904.2-201ENST00000548059 300 ntBASIC-1.41□□□□□ -2.63
USH2AO75445 MIR3942-201ENST00000585264 109 ntBASIC-1.41□□□□□ -2.63
USH2AO75445 AC009161.2-201ENST00000624626 138 ntBASIC-1.41□□□□□ -2.63
USH2AO75445 RNU6-353P-201ENST00000364266 108 ntBASIC-1.41□□□□□ -2.64
USH2AO75445 RNU6-903P-201ENST00000391270 109 ntBASIC-1.41□□□□□ -2.64
USH2AO75445 RNU6-1028P-201ENST00000517164 93 ntBASIC-1.41□□□□□ -2.64
USH2AO75445 uc_338.11-201ENST00000619132 160 ntBASIC-1.41□□□□□ -2.64
USH2AO75445 MIR367-201ENST00000362299 68 ntBASIC-1.41□□□□□ -2.64
USH2AO75445 RNU4-1-201ENST00000363925 141 ntBASIC-1.41□□□□□ -2.64
USH2AO75445 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.41□□□□□ -2.64
USH2AO75445 RNU6-419P-201ENST00000517030 63 ntBASIC-1.41□□□□□ -2.64
USH2AO75445 MIR548AB-201ENST00000584917 84 ntBASIC-1.41□□□□□ -2.64
USH2AO75445 AC090574.1-201ENST00000623186 233 ntBASIC-1.41□□□□□ -2.64
USH2AO75445 SNORD56.2-201ENST00000363242 71 ntBASIC-1.42□□□□□ -2.64
USH2AO75445 RNU6-297P-201ENST00000384636 107 ntBASIC-1.42□□□□□ -2.64
USH2AO75445 MTCYBP36-201ENST00000404146 440 ntBASIC-1.42□□□□□ -2.64
USH2AO75445 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.42□□□□□ -2.64
USH2AO75445 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.42□□□□□ -2.64
USH2AO75445 MIR4775-201ENST00000581168 75 ntBASIC-1.42□□□□□ -2.64
USH2AO75445 RNU4-90P-201ENST00000362773 141 ntBASIC-1.42□□□□□ -2.64
USH2AO75445 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.42□□□□□ -2.64
USH2AO75445 RNU2-72P-201ENST00000411175 163 ntBASIC-1.42□□□□□ -2.64
USH2AO75445 AC098826.2-201ENST00000452011 651 ntBASIC-1.42□□□□□ -2.64
USH2AO75445 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.42□□□□□ -2.64
USH2AO75445 RNA5SP173-201ENST00000364857 136 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 MIR630-201ENST00000384957 97 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 AC083798.1-201ENST00000472671 131 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 Y_RNA.192-201ENST00000363977 102 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 TIMM9P2-201ENST00000419324 266 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.43□□□□□ -2.64
USH2AO75445 RNU7-167P-201ENST00000459160 62 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 RNU7-164P-201ENST00000459221 62 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 RNU6-888P-201ENST00000363010 101 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 SNORD27.1-201ENST00000516319 72 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 RNU6-155P-201ENST00000516347 100 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 AL365205.2-201ENST00000594586 68 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 U6.92-201ENST00000636464 89 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 SNORA40B-201ENST00000385573 128 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 SNORA7.5-201ENST00000410672 110 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 MTCO2P24-201ENST00000515611 426 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 MRPS35P2-201ENST00000508242 191 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 AC107308.1-201ENST00000615897 301 ntBASIC-1.43□□□□□ -2.64
USH2AO75445 SNORD56.4-201ENST00000363883 71 ntBASIC-1.44□□□□□ -2.64
USH2AO75445 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.44□□□□□ -2.64
USH2AO75445 AC022079.1-201ENST00000621546 602 ntBASIC-1.44□□□□□ -2.64
USH2AO75445 SNORD116.2-201ENST00000391251 93 ntBASIC-1.44□□□□□ -2.64
USH2AO75445 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.44□□□□□ -2.64
USH2AO75445 RNU7-140P-201ENST00000459546 60 ntBASIC-1.44□□□□□ -2.64
USH2AO75445 MIR1244-1-201ENST00000612829 85 ntBASIC-1.44□□□□□ -2.64
USH2AO75445 MIR1244-3-201ENST00000635744 85 ntBASIC-1.44□□□□□ -2.64
USH2AO75445 MIR1244-2-201ENST00000636449 85 ntBASIC-1.44□□□□□ -2.64
USH2AO75445 MIR1244-4-202ENST00000636813 85 ntBASIC-1.44□□□□□ -2.64
USH2AO75445 RNU6-790P-201ENST00000384479 105 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms