Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
PHGDHO43175 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
PHGDHO43175 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
PHGDHO43175 RNU6-269P-201ENST00000391077 97 ntBASIC0.52□□□□□ -2.33
PHGDHO43175 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.52□□□□□ -2.33
PHGDHO43175 RNU6-287P-201ENST00000516230 98 ntBASIC0.52□□□□□ -2.33
PHGDHO43175 AC026421.1-201ENST00000519101 163 ntBASIC0.52□□□□□ -2.33
PHGDHO43175 MIR4536-1-201ENST00000583537 88 ntBASIC0.52□□□□□ -2.33
PHGDHO43175 MIR2052-201ENST00000636055 55 ntBASIC0.52□□□□□ -2.33
PHGDHO43175 Y_RNA.96-201ENST00000363092 109 ntBASIC0.51□□□□□ -2.33
PHGDHO43175 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
PHGDHO43175 Y_RNA.355-201ENST00000365462 98 ntBASIC0.51□□□□□ -2.33
PHGDHO43175 SNORD4B-201ENST00000459083 72 ntBASIC0.51□□□□□ -2.33
PHGDHO43175 AC022709.1-201ENST00000615967 87 ntBASIC0.51□□□□□ -2.33
PHGDHO43175 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
PHGDHO43175 SNORD44.1-201ENST00000363202 61 ntBASIC0.5□□□□□ -2.33
PHGDHO43175 Y_RNA.207-201ENST00000364142 106 ntBASIC0.5□□□□□ -2.33
PHGDHO43175 Y_RNA.596-201ENST00000410462 109 ntBASIC0.5□□□□□ -2.33
PHGDHO43175 RNU6-519P-201ENST00000410590 108 ntBASIC0.5□□□□□ -2.33
PHGDHO43175 Y_RNA.609-201ENST00000410669 89 ntBASIC0.5□□□□□ -2.33
PHGDHO43175 RNU6-65P-201ENST00000516332 98 ntBASIC0.5□□□□□ -2.33
PHGDHO43175 MIR4696-201ENST00000581431 70 ntBASIC0.5□□□□□ -2.33
PHGDHO43175 MTRNR2L2-201ENST00000604882 87 ntBASIC0.5□□□□□ -2.33
PHGDHO43175 MALAT1.1-201ENST00000618249 95 ntBASIC0.5□□□□□ -2.33
PHGDHO43175 AL162376.1-201ENST00000624117 175 ntBASIC0.5□□□□□ -2.33
PHGDHO43175 MIRLET7F1-201ENST00000362202 87 ntBASIC0.49□□□□□ -2.33
PHGDHO43175 SNORD116-10-201ENST00000363791 102 ntBASIC0.49□□□□□ -2.33
PHGDHO43175 RNU6-1126P-201ENST00000384002 107 ntBASIC0.49□□□□□ -2.33
PHGDHO43175 RNY1P7-201ENST00000384743 110 ntBASIC0.49□□□□□ -2.33
PHGDHO43175 MIR6513-201ENST00000621188 64 ntBASIC0.49□□□□□ -2.33
PHGDHO43175 MIR103A1-201ENST00000362165 78 ntBASIC0.48□□□□□ -2.33
PHGDHO43175 MIRLET7D-201ENST00000362263 87 ntBASIC0.48□□□□□ -2.33
PHGDHO43175 RNU6-664P-201ENST00000362381 107 ntBASIC0.48□□□□□ -2.33
PHGDHO43175 RNU6-132P-201ENST00000383863 107 ntBASIC0.48□□□□□ -2.33
PHGDHO43175 SNORD101-201ENST00000384027 73 ntBASIC0.48□□□□□ -2.33
PHGDHO43175 RNU2-59P-201ENST00000410482 191 ntBASIC0.48□□□□□ -2.33
PHGDHO43175 MIR2113-201ENST00000459007 91 ntBASIC0.48□□□□□ -2.33
PHGDHO43175 MIR6515-201ENST00000619843 57 ntBASIC0.48□□□□□ -2.33
PHGDHO43175 Y_RNA.423-201ENST00000384057 113 ntBASIC0.47□□□□□ -2.33
PHGDHO43175 MIR519E-201ENST00000385075 84 ntBASIC0.47□□□□□ -2.33
PHGDHO43175 RNU1-29P-201ENST00000606574 126 ntBASIC0.47□□□□□ -2.33
PHGDHO43175 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
PHGDHO43175 Y_RNA.118-201ENST00000363300 101 ntBASIC0.46□□□□□ -2.34
PHGDHO43175 SNORD115-44-201ENST00000365391 82 ntBASIC0.46□□□□□ -2.34
PHGDHO43175 RNU6-1232P-201ENST00000516299 86 ntBASIC0.46□□□□□ -2.34
PHGDHO43175 SNORA70.25-201ENST00000612741 95 ntBASIC0.46□□□□□ -2.34
PHGDHO43175 RNU6-1131P-201ENST00000364955 107 ntBASIC0.45□□□□□ -2.34
PHGDHO43175 RNY4P30-201ENST00000410216 95 ntBASIC0.45□□□□□ -2.34
PHGDHO43175 RNU6-863P-201ENST00000515989 104 ntBASIC0.45□□□□□ -2.34
PHGDHO43175 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.45□□□□□ -2.34
PHGDHO43175 MIR6755-201ENST00000619993 66 ntBASIC0.45□□□□□ -2.34
PHGDHO43175 RNU6-49P-201ENST00000384256 107 ntBASIC0.44□□□□□ -2.34
PHGDHO43175 MIR617-201ENST00000385030 97 ntBASIC0.44□□□□□ -2.34
PHGDHO43175 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
PHGDHO43175 RNA5SP484-201ENST00000458857 111 ntBASIC0.44□□□□□ -2.34
PHGDHO43175 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
PHGDHO43175 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.44□□□□□ -2.34
PHGDHO43175 RNU4-32P-201ENST00000363404 141 ntBASIC0.43□□□□□ -2.34
PHGDHO43175 MIR216A-201ENST00000385063 110 ntBASIC0.43□□□□□ -2.34
PHGDHO43175 RNA5SP292-201ENST00000390974 118 ntBASIC0.43□□□□□ -2.34
PHGDHO43175 NAMPTP3-201ENST00000569273 224 ntBASIC0.43□□□□□ -2.34
PHGDHO43175 MIR3064-201ENST00000581130 66 ntBASIC0.43□□□□□ -2.34
PHGDHO43175 RNY1P4-201ENST00000384595 115 ntBASIC0.42□□□□□ -2.34
PHGDHO43175 MIR598-201ENST00000384868 97 ntBASIC0.42□□□□□ -2.34
PHGDHO43175 AC243829.3-201ENST00000622177 108 ntBASIC0.42□□□□□ -2.34
PHGDHO43175 Y_RNA.239-201ENST00000364444 113 ntBASIC0.41□□□□□ -2.34
PHGDHO43175 RNU1-141P-201ENST00000364623 158 ntBASIC0.41□□□□□ -2.34
PHGDHO43175 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
PHGDHO43175 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
PHGDHO43175 AC093423.1-201ENST00000440817 142 ntBASIC0.41□□□□□ -2.34
PHGDHO43175 RNU7-74P-201ENST00000459104 62 ntBASIC0.41□□□□□ -2.34
PHGDHO43175 AC090625.1-201ENST00000357130 210 ntBASIC0.4□□□□□ -2.35
PHGDHO43175 RNU6-811P-201ENST00000384069 107 ntBASIC0.4□□□□□ -2.35
PHGDHO43175 MIR936-201ENST00000401264 98 ntBASIC0.4□□□□□ -2.35
PHGDHO43175 RNU6-1052P-201ENST00000411398 104 ntBASIC0.4□□□□□ -2.35
PHGDHO43175 RNU6-719P-201ENST00000516671 104 ntBASIC0.4□□□□□ -2.35
PHGDHO43175 AC104996.3-201ENST00000590718 94 ntBASIC0.4□□□□□ -2.35
PHGDHO43175 RNU6-509P-201ENST00000363519 107 ntBASIC0.39□□□□□ -2.35
PHGDHO43175 Y_RNA.220-201ENST00000364244 109 ntBASIC0.39□□□□□ -2.35
PHGDHO43175 SNORD115-27-201ENST00000364430 82 ntBASIC0.39□□□□□ -2.35
PHGDHO43175 RNU6-815P-201ENST00000384080 113 ntBASIC0.39□□□□□ -2.35
PHGDHO43175 SNORD90-201ENST00000391145 111 ntBASIC0.39□□□□□ -2.35
PHGDHO43175 RNU6-935P-201ENST00000410371 100 ntBASIC0.39□□□□□ -2.35
PHGDHO43175 SNORA18.5-201ENST00000516616 101 ntBASIC0.39□□□□□ -2.35
PHGDHO43175 AC073869.9-201ENST00000641610 120 ntBASIC0.39□□□□□ -2.35
PHGDHO43175 RNA5SP62-201ENST00000363457 110 ntBASIC0.38□□□□□ -2.35
PHGDHO43175 SNORA2A-201ENST00000383885 135 ntBASIC0.38□□□□□ -2.35
PHGDHO43175 Y_RNA.491-201ENST00000384417 107 ntBASIC0.38□□□□□ -2.35
PHGDHO43175 MIR451A-201ENST00000385059 72 ntBASIC0.38□□□□□ -2.35
PHGDHO43175 RNU6-402P-201ENST00000410678 103 ntBASIC0.38□□□□□ -2.35
PHGDHO43175 AC073261.1-201ENST00000429409 121 ntBASIC0.38□□□□□ -2.35
PHGDHO43175 RNU7-153P-201ENST00000516455 62 ntBASIC0.38□□□□□ -2.35
PHGDHO43175 RNU6-267P-201ENST00000516714 103 ntBASIC0.38□□□□□ -2.35
PHGDHO43175 MIR4711-201ENST00000578274 70 ntBASIC0.38□□□□□ -2.35
PHGDHO43175 MIR4668-201ENST00000582284 70 ntBASIC0.38□□□□□ -2.35
PHGDHO43175 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
PHGDHO43175 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.38□□□□□ -2.35
PHGDHO43175 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.38□□□□□ -2.35
PHGDHO43175 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
PHGDHO43175 MIR548U-201ENST00000390728 81 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms